RNA–Protein interactions for RNA: ENST00000451980.3

LINC01548-201, Transcript of long intergenic non-protein coding RNA 1548, humanhuman

TSL 5 BASIC

Gene LINC01548, Length 696 nt, Biotype lincRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548-201ENST00000451980 LOC105371045A0A1W2PR82 267 aa13.72□□□□□ -0.21
LINC01548-201ENST00000451980 ZNF608Q9ULD9 1512 aaPredicted RBP13.71□□□□□ -0.21
LINC01548-201ENST00000451980 IGF1RP08069 1367 aa13.71□□□□□ -0.22
LINC01548-201ENST00000451980 TDRD9Q8NDG6 1382 aaKnown RBP13.71□□□□□ -0.22
LINC01548-201ENST00000451980 IFNL1Q8IU54 200 aa13.7□□□□□ -0.22
LINC01548-201ENST00000451980 CDAN1Q8IWY9 1227 aa13.7□□□□□ -0.22
LINC01548-201ENST00000451980 FAM212AQ96EL1 285 aa13.69□□□□□ -0.22
LINC01548-201ENST00000451980 PRXQ9BXM0 1461 aa13.68□□□□□ -0.22
LINC01548-201ENST00000451980 SLAIN1Q8ND83 568 aa13.68□□□□□ -0.22
LINC01548-201ENST00000451980 KIF21BO75037 1637 aa13.68□□□□□ -0.22
LINC01548-201ENST00000451980 TMEM106CQ9BVX2 250 aa13.67□□□□□ -0.22
LINC01548-201ENST00000451980 PBRM1Q86U86 1689 aa13.66□□□□□ -0.22
LINC01548-201ENST00000451980 AQRO60306 1485 aaKnown RBP eCLIP13.66□□□□□ -0.22
LINC01548-201ENST00000451980 GAPVD1Q14C86 1478 aa13.66□□□□□ -0.22
LINC01548-201ENST00000451980 PLCG2P16885 1265 aa13.65□□□□□ -0.22
LINC01548-201ENST00000451980 EIF4G3O43432 1585 aaKnown RBP13.65□□□□□ -0.22
LINC01548-201ENST00000451980 RAPGEF2Q9Y4G8 1499 aa13.63□□□□□ -0.23
LINC01548-201ENST00000451980 ERICH3Q5RHP9 1530 aa13.63□□□□□ -0.23
LINC01548-201ENST00000451980 ST18O60284 1047 aa13.62□□□□□ -0.23
LINC01548-201ENST00000451980 IRX5P78411 483 aaPredicted RBP13.61□□□□□ -0.23
LINC01548-201ENST00000451980 GOLGA3Q08378 1498 aa13.59□□□□□ -0.23
LINC01548-201ENST00000451980 CUL7Q14999 1698 aa13.59□□□□□ -0.23
LINC01548-201ENST00000451980 CARMIL1Q5VZK9 1371 aa13.58□□□□□ -0.24
LINC01548-201ENST00000451980 GRIN2BQ13224 1484 aa13.57□□□□□ -0.24
LINC01548-201ENST00000451980 ADAMTS12P58397 1594 aa13.57□□□□□ -0.24
LINC01548-201ENST00000451980 OCEL1Q9H607 264 aa13.55□□□□□ -0.24
LINC01548-201ENST00000451980 TNIKQ9UKE5 1360 aa13.53□□□□□ -0.24
LINC01548-201ENST00000451980 SNAPC4Q5SXM2 1469 aa13.53□□□□□ -0.24
LINC01548-201ENST00000451980 TMEM121BQ9BXQ6 578 aaPredicted RBP13.52□□□□□ -0.25
LINC01548-201ENST00000451980 FHAD1B1AJZ9 1412 aa13.5□□□□□ -0.25
LINC01548-201ENST00000451980 SNPHO15079 494 aa13.5□□□□□ -0.25
LINC01548-201ENST00000451980 MAGI1Q96QZ7 1491 aaPredicted RBP13.48□□□□□ -0.25
LINC01548-201ENST00000451980 DCAF8Q5TAQ9 597 aa13.48□□□□□ -0.25
LINC01548-201ENST00000451980 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.46□□□□□ -0.25
LINC01548-201ENST00000451980 CTTNBP2Q8WZ74 1663 aa13.45□□□□□ -0.26
LINC01548-201ENST00000451980 SYNJ2O15056 1496 aa13.44□□□□□ -0.26
LINC01548-201ENST00000451980 PYGBP11216 843 aa13.44□□□□□ -0.26
LINC01548-201ENST00000451980 UBTFP17480 764 aaKnown RBP13.44□□□□□ -0.26
LINC01548-201ENST00000451980 GRIN2AQ12879 1464 aa13.43□□□□□ -0.26
LINC01548-201ENST00000451980 CEP162Q5TB80 1403 aa13.43□□□□□ -0.26
LINC01548-201ENST00000451980 CHD1O14646 1710 aa13.42□□□□□ -0.26
LINC01548-201ENST00000451980 FKBP8Q14318 412 aa13.42□□□□□ -0.26
LINC01548-201ENST00000451980 CEP170Q5SW79 1584 aa13.41□□□□□ -0.26
LINC01548-201ENST00000451980 PCDHB8Q9UN66 801 aa13.4□□□□□ -0.26
LINC01548-201ENST00000451980 MMRN1Q13201 1228 aa13.38□□□□□ -0.27
LINC01548-201ENST00000451980 NUP160Q12769 1436 aa13.38□□□□□ -0.27
LINC01548-201ENST00000451980 SPNS2Q8IVW8 549 aa13.37□□□□□ -0.27
LINC01548-201ENST00000451980 FBXO3Q9UK99 471 aa13.36□□□□□ -0.27
LINC01548-201ENST00000451980 CLIP1P30622 1438 aa13.36□□□□□ -0.27
LINC01548-201ENST00000451980 ARHGAP35Q9NRY4 1499 aa13.36□□□□□ -0.27
LINC01548-201ENST00000451980 ARAP1Q96P48 1450 aa13.34□□□□□ -0.27
LINC01548-201ENST00000451980 ZNF467Q7Z7K2 595 aaPredicted RBP13.33□□□□□ -0.28
LINC01548-201ENST00000451980 PDCD7Q8N8D1 485 aaKnown RBP13.33□□□□□ -0.28
LINC01548-201ENST00000451980 KIAA0586Q9BVV6 1533 aa13.33□□□□□ -0.28
LINC01548-201ENST00000451980 IQGAP2Q13576 1575 aa13.32□□□□□ -0.28
LINC01548-201ENST00000451980 SAMD9Q5K651 1589 aa13.32□□□□□ -0.28
LINC01548-201ENST00000451980 CHMP7Q8WUX9 453 aaPredicted RBP13.32□□□□□ -0.28
LINC01548-201ENST00000451980 L3MBTL3Q96JM7 780 aaPredicted RBP13.32□□□□□ -0.28
LINC01548-201ENST00000451980 GSE1Q14687 1217 aa13.31□□□□□ -0.28
LINC01548-201ENST00000451980 MARVELD3Q96A59 401 aa13.31□□□□□ -0.28
LINC01548-201ENST00000451980 C3orf67Q6ZVT6 689 aa13.3□□□□□ -0.28
LINC01548-201ENST00000451980 UGGT2Q9NYU1 1516 aa13.29□□□□□ -0.28
LINC01548-201ENST00000451980 MKRN3Q13064 507 aaKnown RBP13.29□□□□□ -0.28
LINC01548-201ENST00000451980 RANGAP1P46060 587 aaPredicted RBP13.28□□□□□ -0.28
LINC01548-201ENST00000451980 GOLGA2Q08379 1002 aa13.28□□□□□ -0.28
LINC01548-201ENST00000451980 CHRM1P11229 460 aaPredicted RBP13.27□□□□□ -0.29
LINC01548-201ENST00000451980 EFCAB5A4FU69 1503 aa13.27□□□□□ -0.29
LINC01548-201ENST00000451980 CLASP1Q7Z460 1538 aa13.27□□□□□ -0.29
LINC01548-201ENST00000451980 DISP1Q96F81 1524 aa13.26□□□□□ -0.29
LINC01548-201ENST00000451980 SHROOM2Q13796 1616 aa13.25□□□□□ -0.29
LINC01548-201ENST00000451980 FHOD3Q2V2M9 1422 aa13.23□□□□□ -0.29
LINC01548-201ENST00000451980 VPS8Q8N3P4 1428 aa13.23□□□□□ -0.29
LINC01548-201ENST00000451980 EMP3P54852 163 aa13.23□□□□□ -0.29
LINC01548-201ENST00000451980 KIAA0556O60303 1618 aa13.23□□□□□ -0.29
LINC01548-201ENST00000451980 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.22□□□□□ -0.29
LINC01548-201ENST00000451980 KLHL34Q8N239 644 aa13.21□□□□□ -0.29
LINC01548-201ENST00000451980 P3H3Q8IVL6 736 aa13.2□□□□□ -0.3
LINC01548-201ENST00000451980 ERCC6L2Q5T890 1561 aa13.2□□□□□ -0.3
LINC01548-201ENST00000451980 PSEN1P49768 467 aa13.19□□□□□ -0.3
LINC01548-201ENST00000451980 JPH4Q96JJ6 628 aa13.19□□□□□ -0.3
LINC01548-201ENST00000451980 LRRIQ1Q96JM4 1722 aa13.17□□□□□ -0.3
LINC01548-201ENST00000451980 ILDR1Q86SU0 546 aaPredicted RBP13.17□□□□□ -0.3
LINC01548-201ENST00000451980 PCF11O94913 1555 aaKnown RBP13.16□□□□□ -0.3
LINC01548-201ENST00000451980 VASPP50552 380 aaPredicted RBP13.16□□□□□ -0.3
LINC01548-201ENST00000451980 HS3ST6Q96QI5 342 aa13.14□□□□□ -0.31
LINC01548-201ENST00000451980 PRG4Q92954 1404 aaPredicted RBP13.13□□□□□ -0.31
LINC01548-201ENST00000451980 KRTAP3-3Q9BYR6 98 aa13.12□□□□□ -0.31
LINC01548-201ENST00000451980 KRTAP3-2Q9BYR7 98 aa13.12□□□□□ -0.31
LINC01548-201ENST00000451980 FAM205CA6NFA0 338 aa13.11□□□□□ -0.31
LINC01548-201ENST00000451980 PDAP1Q13442 181 aaKnown RBP13.11□□□□□ -0.31
LINC01548-201ENST00000451980 CASKIN1Q8WXD9 1431 aa13.11□□□□□ -0.31
LINC01548-201ENST00000451980 POTEB3A0JP26 581 aa13.1□□□□□ -0.31
LINC01548-201ENST00000451980 POTEBQ6S5H4 581 aa13.1□□□□□ -0.31
LINC01548-201ENST00000451980 FMN1Q68DA7 1419 aa13.1□□□□□ -0.31
LINC01548-201ENST00000451980 FYCO1Q9BQS8 1478 aa13.09□□□□□ -0.31
LINC01548-201ENST00000451980 CFAP43Q8NDM7 1665 aa13.08□□□□□ -0.32
LINC01548-201ENST00000451980 ABCA8O94911 1581 aa13.07□□□□□ -0.32
LINC01548-201ENST00000451980 CARMIL2Q6F5E8 1435 aa13.07□□□□□ -0.32
LINC01548-201ENST00000451980 TIAM1Q13009 1591 aa13.07□□□□□ -0.32
LINC01548-201ENST00000451980 MAP3K1Q13233 1512 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms