RNA–Protein interactions for RNA: ENST00000451980.3

LINC01548-201, Transcript of long intergenic non-protein coding RNA 1548, humanhuman

TSL 5 BASIC

Gene LINC01548, Length 696 nt, Biotype lincRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548-201ENST00000451980 AEBP2Q6ZN18 517 aaPredicted RBP29.46■■■□□ 2.31
LINC01548-201ENST00000451980 CHIC1Q5VXU3 224 aa27.64■■■□□ 2.02
LINC01548-201ENST00000451980 SENP3Q9H4L4 574 aaPredicted RBP25.28■■□□□ 1.64
LINC01548-201ENST00000451980 PHF23Q9BUL5 403 aaPredicted RBP24.85■■□□□ 1.57
LINC01548-201ENST00000451980 FOXD1Q16676 465 aa23.55■■□□□ 1.36
LINC01548-201ENST00000451980 POTEDQ86YR6 584 aa22.36■■□□□ 1.17
LINC01548-201ENST00000451980 MSH5O43196 834 aa22.28■■□□□ 1.16
LINC01548-201ENST00000451980 PLPPR3Q6T4P5 718 aa21.93■■□□□ 1.1
LINC01548-201ENST00000451980 PIAS4Q8N2W9 510 aaPredicted RBP21.91■■□□□ 1.1
LINC01548-201ENST00000451980 PPP6R1Q9UPN7 881 aa21.67■■□□□ 1.06
LINC01548-201ENST00000451980 ADRA2BP18089 450 aa21.58■■□□□ 1.05
LINC01548-201ENST00000451980 DMRT2Q9Y5R5 561 aa19.97■□□□□ 0.79
LINC01548-201ENST00000451980 MAPK8IP2Q13387 824 aaPredicted RBP19.93■□□□□ 0.78
LINC01548-201ENST00000451980 SCAF1Q9H7N4 1312 aaKnown RBP19.86■□□□□ 0.77
LINC01548-201ENST00000451980 NISCHQ9Y2I1 1504 aa19.48■□□□□ 0.71
LINC01548-201ENST00000451980 CACNB1Q02641 598 aaPredicted RBP19.31■□□□□ 0.68
LINC01548-201ENST00000451980 PPP4R3CPQ6ZMV5 832 aa19.13■□□□□ 0.65
LINC01548-201ENST00000451980 DCAF8L1A6NGE4 600 aa19.1■□□□□ 0.65
LINC01548-201ENST00000451980 HOXD11P31277 338 aaPredicted RBP19.09■□□□□ 0.65
LINC01548-201ENST00000451980 RNF39Q9H2S5 420 aa18.93■□□□□ 0.62
LINC01548-201ENST00000451980 CNKSR2Q8WXI2 1034 aa18.9■□□□□ 0.62
LINC01548-201ENST00000451980 RNF216Q9NWF9 866 aaPredicted RBP18.84■□□□□ 0.61
LINC01548-201ENST00000451980 C1QBPQ07021 282 aaKnown RBP18.67■□□□□ 0.58
LINC01548-201ENST00000451980 DNAJC5BQ9UF47 199 aa18.6■□□□□ 0.57
LINC01548-201ENST00000451980 NCBP3Q53F19 620 aaKnown RBP18.33■□□□□ 0.52
LINC01548-201ENST00000451980 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.15■□□□□ 0.5
LINC01548-201ENST00000451980 NPM3O75607 178 aaKnown RBP17.99■□□□□ 0.47
LINC01548-201ENST00000451980 U3KPZ7 1027 aaPredicted RBP17.72■□□□□ 0.43
LINC01548-201ENST00000451980 DSG3P32926 999 aa17.58■□□□□ 0.4
LINC01548-201ENST00000451980 CAPN15O75808 1086 aa17.56■□□□□ 0.4
LINC01548-201ENST00000451980 SPINK5Q9NQ38 1064 aaPredicted RBP17.55■□□□□ 0.4
LINC01548-201ENST00000451980 POTEHQ6S545 545 aa17.45■□□□□ 0.38
LINC01548-201ENST00000451980 APLP2Q06481 763 aa17.29■□□□□ 0.36
LINC01548-201ENST00000451980 SLC4A2P04920 1241 aa17.28■□□□□ 0.36
LINC01548-201ENST00000451980 KCNA4P22459 653 aa17.26■□□□□ 0.35
LINC01548-201ENST00000451980 ZNF219Q9P2Y4 722 aaPredicted RBP17.2■□□□□ 0.34
LINC01548-201ENST00000451980 TRHP20396 242 aaPredicted RBP17.17■□□□□ 0.34
LINC01548-201ENST00000451980 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.16■□□□□ 0.34
LINC01548-201ENST00000451980 HNRNPUL2Q1KMD3 747 aaKnown RBP17.16■□□□□ 0.34
LINC01548-201ENST00000451980 CCDC180Q9P1Z9 1646 aa17.09■□□□□ 0.33
LINC01548-201ENST00000451980 ABCB7O75027 752 aa17.08■□□□□ 0.32
LINC01548-201ENST00000451980 SAMD1Q6SPF0 538 aaPredicted RBP17.02■□□□□ 0.32
LINC01548-201ENST00000451980 RBM42Q9BTD8 480 aaKnown RBP16.85■□□□□ 0.29
LINC01548-201ENST00000451980 MYCNP04198 464 aaPredicted RBP16.69■□□□□ 0.26
LINC01548-201ENST00000451980 POLA2Q14181 598 aa16.63■□□□□ 0.25
LINC01548-201ENST00000451980 CHRDL2Q6WN34 429 aa16.58■□□□□ 0.24
LINC01548-201ENST00000451980 AKT1S1Q96B36 256 aa16.36■□□□□ 0.21
LINC01548-201ENST00000451980 ZBTB12Q9Y330 459 aaPredicted RBP16.35■□□□□ 0.21
LINC01548-201ENST00000451980 ZCCHC6Q5VYS8 1495 aaKnown RBP16.35■□□□□ 0.21
LINC01548-201ENST00000451980 FOXD4L1Q9NU39 408 aa16.29■□□□□ 0.2
LINC01548-201ENST00000451980 ABCC9O60706 1549 aa16.27■□□□□ 0.2
LINC01548-201ENST00000451980 ATF5Q9Y2D1 282 aaPredicted RBP16.25■□□□□ 0.19
LINC01548-201ENST00000451980 SLC4A1APQ9BWU0 796 aaKnown RBP16.24■□□□□ 0.19
LINC01548-201ENST00000451980 SP7Q8TDD2 431 aaPredicted RBP16.18■□□□□ 0.18
LINC01548-201ENST00000451980 REM2Q8IYK8 340 aaPredicted RBP16.16■□□□□ 0.18
LINC01548-201ENST00000451980 DCAF1Q9Y4B6 1507 aa16.12■□□□□ 0.17
LINC01548-201ENST00000451980 OSCARQ8IYS5 282 aa16.1■□□□□ 0.17
LINC01548-201ENST00000451980 PIP4P2Q8N4L2 257 aa16.08■□□□□ 0.16
LINC01548-201ENST00000451980 MYO15BQ96JP2 1530 aa15.99■□□□□ 0.15
LINC01548-201ENST00000451980 PITPNM1O00562 1244 aa15.97■□□□□ 0.15
LINC01548-201ENST00000451980 FXR2P51116 673 aaKnown RBP eCLIP15.96■□□□□ 0.15
LINC01548-201ENST00000451980 DCAF8L2P0C7V8 631 aa15.95■□□□□ 0.14
LINC01548-201ENST00000451980 NACADO15069 1562 aa15.92■□□□□ 0.14
LINC01548-201ENST00000451980 HAX1O00165 279 aa15.9■□□□□ 0.14
LINC01548-201ENST00000451980 ATXN8OSP0DMR3 200 aa15.89■□□□□ 0.13
LINC01548-201ENST00000451980 ZBTB22O15209 634 aa15.84■□□□□ 0.13
LINC01548-201ENST00000451980 RB1CC1Q8TDY2 1594 aa15.8■□□□□ 0.12
LINC01548-201ENST00000451980 SPDYE2BA6NHP3 402 aa15.79■□□□□ 0.12
LINC01548-201ENST00000451980 SPDYE6P0CI01 402 aa15.79■□□□□ 0.12
LINC01548-201ENST00000451980 SPDYE2Q495Y8 402 aa15.79■□□□□ 0.12
LINC01548-201ENST00000451980 FBLN2P98095 1184 aa15.75■□□□□ 0.11
LINC01548-201ENST00000451980 SHROOM4Q9ULL8 1493 aa15.67■□□□□ 0.1
LINC01548-201ENST00000451980 SCRIBQ14160 1630 aa15.65■□□□□ 0.1
LINC01548-201ENST00000451980 UNC13AQ9UPW8 1703 aa15.63■□□□□ 0.09
LINC01548-201ENST00000451980 EVX2Q03828 476 aa15.63■□□□□ 0.09
LINC01548-201ENST00000451980 SPDYE1Q8NFV5 336 aaPredicted RBP15.61■□□□□ 0.09
LINC01548-201ENST00000451980 PRKAR2AP13861 404 aaKnown RBP15.56■□□□□ 0.08
LINC01548-201ENST00000451980 CLEC11AQ9Y240 323 aa15.53■□□□□ 0.08
LINC01548-201ENST00000451980 MKRN4PQ13434 485 aaPredicted RBP15.51■□□□□ 0.07
LINC01548-201ENST00000451980 SSUH2Q9Y2M2 353 aa15.51■□□□□ 0.07
LINC01548-201ENST00000451980 ZNF692Q9BU19 519 aaPredicted RBP15.49■□□□□ 0.07
LINC01548-201ENST00000451980 BICRAQ9NZM4 1560 aa15.46■□□□□ 0.07
LINC01548-201ENST00000451980 C19orf67A6NJJ6 358 aa15.46■□□□□ 0.07
LINC01548-201ENST00000451980 GABBR2O75899 941 aa15.31■□□□□ 0.04
LINC01548-201ENST00000451980 PABPN1Q86U42 306 aaKnown RBP eCLIP15.29■□□□□ 0.04
LINC01548-201ENST00000451980 PRR29P0C7W0 189 aa15.26■□□□□ 0.03
LINC01548-201ENST00000451980 CHADLQ6NUI6 762 aa15.25■□□□□ 0.03
LINC01548-201ENST00000451980 CECR2Q9BXF3 1484 aa15.19■□□□□ 0.02
LINC01548-201ENST00000451980 LHX8Q68G74 356 aa15.17■□□□□ 0.02
LINC01548-201ENST00000451980 MROH2BQ7Z745 1585 aa15.07■□□□□ 0
LINC01548-201ENST00000451980 CLCN6P51797 869 aa15.06■□□□□ 0
LINC01548-201ENST00000451980 CD44P16070 742 aaKnown RBP15.05■□□□□ -0
LINC01548-201ENST00000451980 FARP1Q9Y4F1 1045 aaPredicted RBP15.05■□□□□ -0
LINC01548-201ENST00000451980 RSF1Q96T23 1441 aaPredicted RBP15.04■□□□□ -0
LINC01548-201ENST00000451980 SMARCA4P51532 1647 aa15.03■□□□□ -0
LINC01548-201ENST00000451980 BAZ1AQ9NRL2 1556 aaPredicted RBP15.01□□□□□ -0.01
LINC01548-201ENST00000451980 POTEIP0CG38 1075 aa14.96□□□□□ -0.01
LINC01548-201ENST00000451980 WIZO95785 1651 aa14.94□□□□□ -0.02
LINC01548-201ENST00000451980 SUPT5HO00267 1087 aaKnown RBP14.94□□□□□ -0.02
LINC01548-201ENST00000451980 EIF4G1Q04637 1599 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms