RNA–Protein interactions for RNA: ENST00000444476.1

LINC00475-208, long intergenic non-protein coding RNA 475, humanhuman

TSL 3

Gene LINC00475, Length 456 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-208ENST00000444476 AQRO60306 1485 aaKnown RBP eCLIP19.04■□□□□ 0.64
LINC00475-208ENST00000444476 TDRD9Q8NDG6 1382 aaKnown RBP19.02■□□□□ 0.64
LINC00475-208ENST00000444476 PCDH10Q9P2E7 1040 aa19.01■□□□□ 0.63
LINC00475-208ENST00000444476 KLHL34Q8N239 644 aa18.99■□□□□ 0.63
LINC00475-208ENST00000444476 PYGBP11216 843 aa18.98■□□□□ 0.63
LINC00475-208ENST00000444476 GRIN2BQ13224 1484 aa18.97■□□□□ 0.63
LINC00475-208ENST00000444476 VASPP50552 380 aaPredicted RBP18.97■□□□□ 0.63
LINC00475-208ENST00000444476 FAM163AQ96GL9 167 aaPredicted RBP18.97■□□□□ 0.63
LINC00475-208ENST00000444476 GAPVD1Q14C86 1478 aa18.97■□□□□ 0.63
LINC00475-208ENST00000444476 PLCG2P16885 1265 aa18.95■□□□□ 0.62
LINC00475-208ENST00000444476 ABCA5Q8WWZ7 1642 aa18.95■□□□□ 0.62
LINC00475-208ENST00000444476 MAGI1Q96QZ7 1491 aaPredicted RBP18.95■□□□□ 0.62
LINC00475-208ENST00000444476 GSE1Q14687 1217 aa18.94■□□□□ 0.62
LINC00475-208ENST00000444476 SNAPC4Q5SXM2 1469 aa18.9■□□□□ 0.62
LINC00475-208ENST00000444476 PBRM1Q86U86 1689 aa18.9■□□□□ 0.62
LINC00475-208ENST00000444476 CHD1O14646 1710 aa18.86■□□□□ 0.61
LINC00475-208ENST00000444476 SYNJ2O15056 1496 aa18.85■□□□□ 0.61
LINC00475-208ENST00000444476 IRX5P78411 483 aaPredicted RBP18.85■□□□□ 0.61
LINC00475-208ENST00000444476 ERICH3Q5RHP9 1530 aa18.84■□□□□ 0.61
LINC00475-208ENST00000444476 LCE2DQ5TA82 110 aaPredicted RBP18.84■□□□□ 0.61
LINC00475-208ENST00000444476 PCDHB8Q9UN66 801 aa18.84■□□□□ 0.61
LINC00475-208ENST00000444476 ZNF467Q7Z7K2 595 aaPredicted RBP18.83■□□□□ 0.6
LINC00475-208ENST00000444476 CHMP7Q8WUX9 453 aaPredicted RBP18.82■□□□□ 0.6
LINC00475-208ENST00000444476 OCEL1Q9H607 264 aa18.82■□□□□ 0.6
LINC00475-208ENST00000444476 SLAIN1Q8ND83 568 aa18.8■□□□□ 0.6
LINC00475-208ENST00000444476 KIF27Q86VH2 1401 aa18.79■□□□□ 0.6
LINC00475-208ENST00000444476 ADAMTS12P58397 1594 aa18.77■□□□□ 0.6
LINC00475-208ENST00000444476 FHAD1B1AJZ9 1412 aa18.76■□□□□ 0.59
LINC00475-208ENST00000444476 CHRM1P11229 460 aaPredicted RBP18.76■□□□□ 0.59
LINC00475-208ENST00000444476 TRIM41Q8WV44 630 aa18.73■□□□□ 0.59
LINC00475-208ENST00000444476 GOLGA2Q08379 1002 aa18.72■□□□□ 0.59
LINC00475-208ENST00000444476 GRIN2AQ12879 1464 aa18.71■□□□□ 0.59
LINC00475-208ENST00000444476 CLASP1Q7Z460 1538 aa18.69■□□□□ 0.58
LINC00475-208ENST00000444476 CUL7Q14999 1698 aa18.68■□□□□ 0.58
LINC00475-208ENST00000444476 IGF1RP08069 1367 aa18.67■□□□□ 0.58
LINC00475-208ENST00000444476 MKRN3Q13064 507 aaKnown RBP18.66■□□□□ 0.58
LINC00475-208ENST00000444476 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.65■□□□□ 0.58
LINC00475-208ENST00000444476 SPOCK2Q92563 424 aa18.64■□□□□ 0.57
LINC00475-208ENST00000444476 NUP160Q12769 1436 aa18.64■□□□□ 0.57
LINC00475-208ENST00000444476 ARHGEF11O15085 1522 aa18.64■□□□□ 0.57
LINC00475-208ENST00000444476 RIMBP3CA6NJZ7 1639 aa18.61■□□□□ 0.57
LINC00475-208ENST00000444476 RIMBP3BA6NNM3 1639 aa18.61■□□□□ 0.57
LINC00475-208ENST00000444476 RIMBP3Q9UFD9 1639 aa18.61■□□□□ 0.57
LINC00475-208ENST00000444476 SNPHO15079 494 aa18.59■□□□□ 0.57
LINC00475-208ENST00000444476 PSEN1P49768 467 aa18.59■□□□□ 0.57
LINC00475-208ENST00000444476 CEP170Q5SW79 1584 aa18.59■□□□□ 0.57
LINC00475-208ENST00000444476 ST18O60284 1047 aa18.57■□□□□ 0.56
LINC00475-208ENST00000444476 CARMIL1Q5VZK9 1371 aa18.56■□□□□ 0.56
LINC00475-208ENST00000444476 L3MBTL3Q96JM7 780 aaPredicted RBP18.56■□□□□ 0.56
LINC00475-208ENST00000444476 IFNLR1Q8IU57 520 aaPredicted RBP18.55■□□□□ 0.56
LINC00475-208ENST00000444476 CIZ1Q9ULV3 898 aaPredicted RBP18.55■□□□□ 0.56
LINC00475-208ENST00000444476 PDAP1Q13442 181 aaKnown RBP18.54■□□□□ 0.56
LINC00475-208ENST00000444476 PDCD7Q8N8D1 485 aaKnown RBP18.52■□□□□ 0.56
LINC00475-208ENST00000444476 C3orf67Q6ZVT6 689 aa18.51■□□□□ 0.55
LINC00475-208ENST00000444476 CDAN1Q8IWY9 1227 aa18.51■□□□□ 0.55
LINC00475-208ENST00000444476 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.51■□□□□ 0.55
LINC00475-208ENST00000444476 SHROOM2Q13796 1616 aa18.5■□□□□ 0.55
LINC00475-208ENST00000444476 TMEM121BQ9BXQ6 578 aaPredicted RBP18.5■□□□□ 0.55
LINC00475-208ENST00000444476 EEA1Q15075 1411 aa18.49■□□□□ 0.55
LINC00475-208ENST00000444476 RUSC2Q8N2Y8 1516 aa18.49■□□□□ 0.55
LINC00475-208ENST00000444476 RAPGEF2Q9Y4G8 1499 aa18.48■□□□□ 0.55
LINC00475-208ENST00000444476 KIAA0586Q9BVV6 1533 aa18.48■□□□□ 0.55
LINC00475-208ENST00000444476 ARAP1Q96P48 1450 aa18.46■□□□□ 0.55
LINC00475-208ENST00000444476 JPH4Q96JJ6 628 aa18.43■□□□□ 0.54
LINC00475-208ENST00000444476 CYB5RLQ6IPT4 315 aa18.42■□□□□ 0.54
LINC00475-208ENST00000444476 PRXQ9BXM0 1461 aa18.4■□□□□ 0.54
LINC00475-208ENST00000444476 PRG4Q92954 1404 aaPredicted RBP18.39■□□□□ 0.53
LINC00475-208ENST00000444476 IQGAP2Q13576 1575 aa18.36■□□□□ 0.53
LINC00475-208ENST00000444476 ILDR1Q86SU0 546 aaPredicted RBP18.36■□□□□ 0.53
LINC00475-208ENST00000444476 CABP2Q9NPB3 220 aa18.36■□□□□ 0.53
LINC00475-208ENST00000444476 G3V3G9 751 aa18.35■□□□□ 0.53
LINC00475-208ENST00000444476 ERCC6L2Q5T890 1561 aa18.34■□□□□ 0.53
LINC00475-208ENST00000444476 CARMIL2Q6F5E8 1435 aa18.31■□□□□ 0.52
LINC00475-208ENST00000444476 CTTNBP2Q8WZ74 1663 aa18.29■□□□□ 0.52
LINC00475-208ENST00000444476 UGGT2Q9NYU1 1516 aa18.28■□□□□ 0.52
LINC00475-208ENST00000444476 KIF21BO75037 1637 aa18.24■□□□□ 0.51
LINC00475-208ENST00000444476 BOLA1Q9Y3E2 137 aa18.23■□□□□ 0.51
LINC00475-208ENST00000444476 TNIKQ9UKE5 1360 aa18.22■□□□□ 0.51
LINC00475-208ENST00000444476 MARVELD3Q96A59 401 aa18.22■□□□□ 0.51
LINC00475-208ENST00000444476 GOLGA3Q08378 1498 aa18.21■□□□□ 0.51
LINC00475-208ENST00000444476 DPY19L2Q6NUT2 758 aa18.21■□□□□ 0.51
LINC00475-208ENST00000444476 DISP1Q96F81 1524 aa18.19■□□□□ 0.5
LINC00475-208ENST00000444476 PTPRGP23470 1445 aa18.19■□□□□ 0.5
LINC00475-208ENST00000444476 FAM9AQ8IZU1 332 aaPredicted RBP18.19■□□□□ 0.5
LINC00475-208ENST00000444476 KIAA0556O60303 1618 aa18.17■□□□□ 0.5
LINC00475-208ENST00000444476 EMP3P54852 163 aa18.17■□□□□ 0.5
LINC00475-208ENST00000444476 EFCAB3Q8N7B9 438 aa18.1■□□□□ 0.49
LINC00475-208ENST00000444476 ADCY10Q96PN6 1610 aa18.09■□□□□ 0.49
LINC00475-208ENST00000444476 UHRF1BP1LA0JNW5 1464 aa18.09■□□□□ 0.49
LINC00475-208ENST00000444476 UACAQ9BZF9 1416 aa18.07■□□□□ 0.48
LINC00475-208ENST00000444476 RIOK3O14730 519 aaKnown RBP18.07■□□□□ 0.48
LINC00475-208ENST00000444476 SAMD9Q5K651 1589 aa18.06■□□□□ 0.48
LINC00475-208ENST00000444476 MAPKBP1O60336 1514 aa18.06■□□□□ 0.48
LINC00475-208ENST00000444476 SPNS2Q8IVW8 549 aa18.05■□□□□ 0.48
LINC00475-208ENST00000444476 ABCC2Q92887 1545 aa18.04■□□□□ 0.48
LINC00475-208ENST00000444476 EFCAB5A4FU69 1503 aa18.03■□□□□ 0.48
LINC00475-208ENST00000444476 UBTFP17480 764 aaKnown RBP18.03■□□□□ 0.48
LINC00475-208ENST00000444476 TTBK1Q5TCY1 1321 aaPredicted RBP18.02■□□□□ 0.48
LINC00475-208ENST00000444476 SOX12O15370 315 aa18.02■□□□□ 0.48
LINC00475-208ENST00000444476 VGFO15240 615 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms