RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 MYOM3Q5VTT5 1437 aa15.51■□□□□ 0.07
HCFC1-203ENST00000444191 CASKIN1Q8WXD9 1431 aa15.51■□□□□ 0.07
HCFC1-203ENST00000444191 CHMP7Q8WUX9 453 aaPredicted RBP15.51■□□□□ 0.07
HCFC1-203ENST00000444191 ARXQ96QS3 562 aa15.51■□□□□ 0.07
HCFC1-203ENST00000444191 AQRO60306 1485 aaKnown RBP eCLIP15.51■□□□□ 0.074e-7■■■■■ 27.8
HCFC1-203ENST00000444191 NAIPQ13075 1403 aa15.5■□□□□ 0.07
HCFC1-203ENST00000444191 DNAJC5BQ9UF47 199 aa15.5■□□□□ 0.07
HCFC1-203ENST00000444191 ST20-MTHFSA0A0A6YYL1 179 aa15.5■□□□□ 0.07
HCFC1-203ENST00000444191 EXOC6Q8TAG9 804 aa15.5■□□□□ 0.07
HCFC1-203ENST00000444191 BIVM-ERCC5R4GMW8 1640 aa15.5■□□□□ 0.07
HCFC1-203ENST00000444191 CNTLNQ9NXG0 1405 aa15.47■□□□□ 0.07
HCFC1-203ENST00000444191 HFM1A2PYH4 1435 aa15.47■□□□□ 0.07
HCFC1-203ENST00000444191 RGS3P49796 1198 aa15.47■□□□□ 0.07
HCFC1-203ENST00000444191 SKAP1Q86WV1 359 aa15.47■□□□□ 0.07
HCFC1-203ENST00000444191 EIF5BO60841 1220 aaKnown RBP15.45■□□□□ 0.06
HCFC1-203ENST00000444191 SLC4A3P48751 1232 aa15.45■□□□□ 0.06
HCFC1-203ENST00000444191 CANXP27824 592 aaKnown RBP15.45■□□□□ 0.06
HCFC1-203ENST00000444191 ERICH6BQ5W0A0 696 aa15.45■□□□□ 0.06
HCFC1-203ENST00000444191 IPO9Q96P70 1041 aaKnown RBP15.44■□□□□ 0.06
HCFC1-203ENST00000444191 RCAN3Q9UKA8 241 aa15.44■□□□□ 0.06
HCFC1-203ENST00000444191 FYCO1Q9BQS8 1478 aa15.44■□□□□ 0.06
HCFC1-203ENST00000444191 PLEKHD1A6NEE1 506 aa15.43■□□□□ 0.06
HCFC1-203ENST00000444191 NUP155O75694 1391 aa15.42■□□□□ 0.06
HCFC1-203ENST00000444191 USP47Q96K76 1375 aa15.42■□□□□ 0.06
HCFC1-203ENST00000444191 POLA1P09884 1462 aaPredicted RBP15.41■□□□□ 0.06
HCFC1-203ENST00000444191 CC2D2AQ9P2K1 1620 aa15.4■□□□□ 0.06
HCFC1-203ENST00000444191 WDR43Q15061 677 aaKnown RBP eCLIP15.4■□□□□ 0.067e-6■■■■■ 27.3
HCFC1-203ENST00000444191 CDCA7LQ96GN5 454 aa15.4■□□□□ 0.06
HCFC1-203ENST00000444191 HNRNPMP52272 730 aaKnown RBP eCLIP15.4■□□□□ 0.06
HCFC1-203ENST00000444191 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.4■□□□□ 0.06
HCFC1-203ENST00000444191 PDS5BQ9NTI5 1447 aa15.39■□□□□ 0.05
HCFC1-203ENST00000444191 NEUROD2Q15784 382 aa15.39■□□□□ 0.05
HCFC1-203ENST00000444191 GAPVD1Q14C86 1478 aa15.37■□□□□ 0.05
HCFC1-203ENST00000444191 CHGAP10645 457 aaKnown RBP15.36■□□□□ 0.05
HCFC1-203ENST00000444191 TNNT2P45379 298 aaPredicted RBP15.35■□□□□ 0.05
HCFC1-203ENST00000444191 PDE4AP27815 886 aa15.35■□□□□ 0.05
HCFC1-203ENST00000444191 ROCK2O75116 1388 aaKnown RBP15.34■□□□□ 0.05
HCFC1-203ENST00000444191 RRP1P56182 461 aaKnown RBP15.34■□□□□ 0.05
HCFC1-203ENST00000444191 TOPBP1Q92547 1522 aa15.33■□□□□ 0.05
HCFC1-203ENST00000444191 CDK13Q14004 1512 aaKnown RBP15.33■□□□□ 0.04
HCFC1-203ENST00000444191 PNISRQ8TF01 805 aaKnown RBP15.32■□□□□ 0.04
HCFC1-203ENST00000444191 MAP3K1Q13233 1512 aa15.31■□□□□ 0.04
HCFC1-203ENST00000444191 PTPN23Q9H3S7 1636 aa15.31■□□□□ 0.04
HCFC1-203ENST00000444191 PRDM2Q13029 1718 aa15.3■□□□□ 0.04
HCFC1-203ENST00000444191 CCDC146Q8IYE0 955 aa15.3■□□□□ 0.04
HCFC1-203ENST00000444191 CRBNQ96SW2 442 aa15.3■□□□□ 0.04
HCFC1-203ENST00000444191 KNSTRNQ9Y448 316 aa15.3■□□□□ 0.04
HCFC1-203ENST00000444191 IL27Q8NEV9 243 aa15.29■□□□□ 0.04
HCFC1-203ENST00000444191 NBPF1Q3BBV0 1214 aa15.28■□□□□ 0.04
HCFC1-203ENST00000444191 PANK3Q9H999 370 aa15.28■□□□□ 0.04
HCFC1-203ENST00000444191 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.28■□□□□ 0.04
HCFC1-203ENST00000444191 NLRP13Q86W25 1043 aa15.28■□□□□ 0.04
HCFC1-203ENST00000444191 FRAT1Q92837 279 aaPredicted RBP15.28■□□□□ 0.04
HCFC1-203ENST00000444191 KTN1Q86UP2 1357 aaKnown RBP15.27■□□□□ 0.04
HCFC1-203ENST00000444191 MYBBP1AQ9BQG0 1328 aaKnown RBP15.27■□□□□ 0.04
HCFC1-203ENST00000444191 TCERG1O14776 1098 aaKnown RBP15.26■□□□□ 0.03
HCFC1-203ENST00000444191 RALBP1Q15311 655 aa15.26■□□□□ 0.03
HCFC1-203ENST00000444191 ANKRD30BQ9BXX2 1392 aa15.25■□□□□ 0.03
HCFC1-203ENST00000444191 EFCAB5A4FU69 1503 aa15.25■□□□□ 0.03
HCFC1-203ENST00000444191 NCOA1Q15788 1441 aa15.25■□□□□ 0.03
HCFC1-203ENST00000444191 ANKRD30AQ9BXX3 1397 aa15.25■□□□□ 0.03
HCFC1-203ENST00000444191 KIF15Q9NS87 1388 aa15.24■□□□□ 0.03
HCFC1-203ENST00000444191 SPRYD3Q8NCJ5 442 aa15.24■□□□□ 0.03
HCFC1-203ENST00000444191 PPM1GO15355 546 aaPredicted RBP15.22■□□□□ 0.03
HCFC1-203ENST00000444191 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.22■□□□□ 0.03
HCFC1-203ENST00000444191 PRG4Q92954 1404 aaPredicted RBP15.22■□□□□ 0.03
HCFC1-203ENST00000444191 ABCA10Q8WWZ4 1543 aa15.22■□□□□ 0.03
HCFC1-203ENST00000444191 TMF1P82094 1093 aa15.22■□□□□ 0.03
HCFC1-203ENST00000444191 DDRGK1Q96HY6 314 aa15.2■□□□□ 0.02
HCFC1-203ENST00000444191 SUPT6HQ7KZ85 1726 aaKnown RBP15.2■□□□□ 0.02
HCFC1-203ENST00000444191 JPH4Q96JJ6 628 aa15.19■□□□□ 0.02
HCFC1-203ENST00000444191 SLKQ9H2G2 1235 aaPredicted RBP15.19■□□□□ 0.02
HCFC1-203ENST00000444191 SMG6Q86US8 1419 aaKnown RBP15.19■□□□□ 0.02
HCFC1-203ENST00000444191 EPRSP07814 1512 aaKnown RBP15.19■□□□□ 0.02
HCFC1-203ENST00000444191 EHBP1L1Q8N3D4 1523 aa15.19■□□□□ 0.02
HCFC1-203ENST00000444191 DAPK1P53355 1430 aa15.18■□□□□ 0.02
HCFC1-203ENST00000444191 C20orf194Q5TEA3 1177 aa15.18■□□□□ 0.02
HCFC1-203ENST00000444191 ADAMTS8Q9UP79 889 aa15.17■□□□□ 0.02
HCFC1-203ENST00000444191 SNAPC4Q5SXM2 1469 aa15.16■□□□□ 0.02
HCFC1-203ENST00000444191 DNMBPQ6XZF7 1577 aa15.16■□□□□ 0.02
HCFC1-203ENST00000444191 ABCC5O15440 1437 aa15.15■□□□□ 0.02
HCFC1-203ENST00000444191 ANKRD50Q9ULJ7 1429 aa15.15■□□□□ 0.02
HCFC1-203ENST00000444191 RRP7AQ9Y3A4 280 aaKnown RBP15.15■□□□□ 0.02
HCFC1-203ENST00000444191 CLUAP1Q96AJ1 413 aa15.15■□□□□ 0.02
HCFC1-203ENST00000444191 BCL2L13Q9BXK5 485 aa15.15■□□□□ 0.02
HCFC1-203ENST00000444191 CFAP43Q8NDM7 1665 aa15.14■□□□□ 0.01
HCFC1-203ENST00000444191 BRPF3Q9ULD4 1205 aa15.13■□□□□ 0.01
HCFC1-203ENST00000444191 RPRD2Q5VT52 1461 aaKnown RBP15.13■□□□□ 0.01
HCFC1-203ENST00000444191 BACH2Q9BYV9 841 aa15.12■□□□□ 0.01
HCFC1-203ENST00000444191 URB2Q14146 1524 aaKnown RBP15.12■□□□□ 0.01
HCFC1-203ENST00000444191 APAF1O14727 1248 aa15.12■□□□□ 0.01
HCFC1-203ENST00000444191 GRIN2BQ13224 1484 aa15.12■□□□□ 0.01
HCFC1-203ENST00000444191 KDM6BO15054 1643 aa15.11■□□□□ 0.01
HCFC1-203ENST00000444191 THOC2Q8NI27 1593 aaKnown RBP15.11■□□□□ 0.01
HCFC1-203ENST00000444191 GOLGA2Q08379 1002 aa15.11■□□□□ 0.01
HCFC1-203ENST00000444191 PDE3BQ13370 1112 aa15.1■□□□□ 0.01
HCFC1-203ENST00000444191 SAFB2Q14151 953 aaKnown RBP eCLIP15.1■□□□□ 0.01
HCFC1-203ENST00000444191 UPF2Q9HAU5 1272 aaKnown RBP15.1■□□□□ 0.01
HCFC1-203ENST00000444191 KIAA1107Q9UPP5 1409 aa15.1■□□□□ 0.01
HCFC1-203ENST00000444191 MIA2Q96PC5 1412 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms