RNA–Protein interactions for RNA: ENST00000439706.5

SLC38A1-202, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-202ENST00000439706 RAD54L2Q9Y4B4 1467 aa16.58■□□□□ 0.25
SLC38A1-202ENST00000439706 CADPSQ9ULU8 1353 aa16.58■□□□□ 0.25
SLC38A1-202ENST00000439706 ARXQ96QS3 562 aa16.58■□□□□ 0.24
SLC38A1-202ENST00000439706 ZNF644Q9H582 1327 aaPredicted RBP16.57■□□□□ 0.24
SLC38A1-202ENST00000439706 CDCA7LQ96GN5 454 aa16.57■□□□□ 0.24
SLC38A1-202ENST00000439706 TDRD9Q8NDG6 1382 aaKnown RBP16.54■□□□□ 0.24
SLC38A1-202ENST00000439706 RCAN3Q9UKA8 241 aa16.53■□□□□ 0.24
SLC38A1-202ENST00000439706 FYCO1Q9BQS8 1478 aa16.52■□□□□ 0.24
SLC38A1-202ENST00000439706 NCOA2Q15596 1464 aa16.51■□□□□ 0.23
SLC38A1-202ENST00000439706 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.51■□□□□ 0.23
SLC38A1-202ENST00000439706 PNISRQ8TF01 805 aaKnown RBP16.51■□□□□ 0.23
SLC38A1-202ENST00000439706 RRP1P56182 461 aaKnown RBP16.51■□□□□ 0.23
SLC38A1-202ENST00000439706 CASKIN1Q8WXD9 1431 aa16.5■□□□□ 0.23
SLC38A1-202ENST00000439706 CARD11Q9BXL7 1154 aa16.5■□□□□ 0.23
SLC38A1-202ENST00000439706 CC2D1BQ5T0F9 858 aaKnown RBP16.49■□□□□ 0.23
SLC38A1-202ENST00000439706 NCOA1Q15788 1441 aa16.49■□□□□ 0.23
SLC38A1-202ENST00000439706 PTPN23Q9H3S7 1636 aa16.48■□□□□ 0.23
SLC38A1-202ENST00000439706 MYOM3Q5VTT5 1437 aa16.48■□□□□ 0.23
SLC38A1-202ENST00000439706 RGS3P49796 1198 aa16.48■□□□□ 0.23
SLC38A1-202ENST00000439706 SMG6Q86US8 1419 aaKnown RBP16.48■□□□□ 0.23
SLC38A1-202ENST00000439706 EFCAB5A4FU69 1503 aa16.47■□□□□ 0.23
SLC38A1-202ENST00000439706 ST20-MTHFSA0A0A6YYL1 179 aa16.46■□□□□ 0.23
SLC38A1-202ENST00000439706 RGL3Q3MIN7 710 aa16.45■□□□□ 0.22
SLC38A1-202ENST00000439706 BACH2Q9BYV9 841 aa16.45■□□□□ 0.22
SLC38A1-202ENST00000439706 TCERG1O14776 1098 aaKnown RBP16.44■□□□□ 0.22
SLC38A1-202ENST00000439706 PKD2Q13563 968 aa16.44■□□□□ 0.22
SLC38A1-202ENST00000439706 CRBNQ96SW2 442 aa16.44■□□□□ 0.22
SLC38A1-202ENST00000439706 FANCD2Q9BXW9 1451 aa16.44■□□□□ 0.22
SLC38A1-202ENST00000439706 KDM5BQ9UGL1 1544 aa16.44■□□□□ 0.22
SLC38A1-202ENST00000439706 USP47Q96K76 1375 aa16.43■□□□□ 0.22
SLC38A1-202ENST00000439706 FRAT1Q92837 279 aaPredicted RBP16.43■□□□□ 0.22
SLC38A1-202ENST00000439706 NFKBIBQ15653 356 aa16.42■□□□□ 0.22
SLC38A1-202ENST00000439706 PPM1GO15355 546 aaPredicted RBP16.41■□□□□ 0.22
SLC38A1-202ENST00000439706 C20orf194Q5TEA3 1177 aa16.41■□□□□ 0.22
SLC38A1-202ENST00000439706 DCAF11Q8TEB1 546 aa16.41■□□□□ 0.22
SLC38A1-202ENST00000439706 ABCA10Q8WWZ4 1543 aa16.41■□□□□ 0.22
SLC38A1-202ENST00000439706 CTTNBP2Q8WZ74 1663 aa16.41■□□□□ 0.22
SLC38A1-202ENST00000439706 GSE1Q14687 1217 aa16.4■□□□□ 0.22
SLC38A1-202ENST00000439706 SNAPC4Q5SXM2 1469 aa16.4■□□□□ 0.22
SLC38A1-202ENST00000439706 POLA1P09884 1462 aaPredicted RBP16.39■□□□□ 0.21
SLC38A1-202ENST00000439706 DENND4BO75064 1496 aaPredicted RBP16.38■□□□□ 0.21
SLC38A1-202ENST00000439706 DNMBPQ6XZF7 1577 aa16.38■□□□□ 0.21
SLC38A1-202ENST00000439706 KDM6BO15054 1643 aa16.38■□□□□ 0.21
SLC38A1-202ENST00000439706 CC2D2AQ9P2K1 1620 aa16.38■□□□□ 0.21
SLC38A1-202ENST00000439706 CUL7Q14999 1698 aa16.37■□□□□ 0.21
SLC38A1-202ENST00000439706 FRAT2O75474 233 aaPredicted RBP16.37■□□□□ 0.21
SLC38A1-202ENST00000439706 TOPBP1Q92547 1522 aa16.36■□□□□ 0.21
SLC38A1-202ENST00000439706 DHX29Q7Z478 1369 aaKnown RBP16.36■□□□□ 0.21
SLC38A1-202ENST00000439706 ANKRD30BQ9BXX2 1392 aa16.36■□□□□ 0.21
SLC38A1-202ENST00000439706 LRRIQ1Q96JM4 1722 aa16.35■□□□□ 0.21
SLC38A1-202ENST00000439706 RNF123Q5XPI4 1314 aa16.35■□□□□ 0.21
SLC38A1-202ENST00000439706 CFDP1Q9UEE9 299 aaPredicted RBP16.31■□□□□ 0.2
SLC38A1-202ENST00000439706 SPRYD3Q8NCJ5 442 aa16.31■□□□□ 0.2
SLC38A1-202ENST00000439706 SLKQ9H2G2 1235 aaPredicted RBP16.31■□□□□ 0.2
SLC38A1-202ENST00000439706 USP35Q9P2H5 1018 aa16.31■□□□□ 0.2
SLC38A1-202ENST00000439706 MYBBP1AQ9BQG0 1328 aaKnown RBP16.3■□□□□ 0.2
SLC38A1-202ENST00000439706 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.3■□□□□ 0.2
SLC38A1-202ENST00000439706 DDRGK1Q96HY6 314 aa16.29■□□□□ 0.2
SLC38A1-202ENST00000439706 SUPT6HQ7KZ85 1726 aaKnown RBP16.28■□□□□ 0.2
SLC38A1-202ENST00000439706 GRIN2BQ13224 1484 aa16.28■□□□□ 0.2
SLC38A1-202ENST00000439706 SAMD9Q5K651 1589 aa16.28■□□□□ 0.2
SLC38A1-202ENST00000439706 NESP48681 1621 aa16.28■□□□□ 0.2
SLC38A1-202ENST00000439706 SPATA31E1Q6ZUB1 1445 aa16.26■□□□□ 0.19
SLC38A1-202ENST00000439706 CDK13Q14004 1512 aaKnown RBP16.26■□□□□ 0.19
SLC38A1-202ENST00000439706 FBLN2P98095 1184 aa16.26■□□□□ 0.19
SLC38A1-202ENST00000439706 NBPF1Q3BBV0 1214 aa16.25■□□□□ 0.19
SLC38A1-202ENST00000439706 NLRP13Q86W25 1043 aa16.25■□□□□ 0.19
SLC38A1-202ENST00000439706 RPRD2Q5VT52 1461 aaKnown RBP16.25■□□□□ 0.19
SLC38A1-202ENST00000439706 EHBP1L1Q8N3D4 1523 aa16.25■□□□□ 0.19
SLC38A1-202ENST00000439706 KIF15Q9NS87 1388 aa16.24■□□□□ 0.19
SLC38A1-202ENST00000439706 CCDC146Q8IYE0 955 aa16.24■□□□□ 0.19
SLC38A1-202ENST00000439706 MS4A1P11836 297 aa16.24■□□□□ 0.19
SLC38A1-202ENST00000439706 MAGI3Q5TCQ9 1506 aa16.24■□□□□ 0.19
SLC38A1-202ENST00000439706 UGGT2Q9NYU1 1516 aa16.23■□□□□ 0.19
SLC38A1-202ENST00000439706 RALBP1Q15311 655 aa16.23■□□□□ 0.19
SLC38A1-202ENST00000439706 GZF1Q9H116 711 aaPredicted RBP16.22■□□□□ 0.19
SLC38A1-202ENST00000439706 NUP155O75694 1391 aa16.22■□□□□ 0.19
SLC38A1-202ENST00000439706 WASHC2CQ9Y4E1 1318 aa16.22■□□□□ 0.19
SLC38A1-202ENST00000439706 THOC2Q8NI27 1593 aaKnown RBP16.22■□□□□ 0.19
SLC38A1-202ENST00000439706 PANK3Q9H999 370 aa16.22■□□□□ 0.19
SLC38A1-202ENST00000439706 ADAMTS8Q9UP79 889 aa16.22■□□□□ 0.19
SLC38A1-202ENST00000439706 ARID4BQ4LE39 1312 aaPredicted RBP16.2■□□□□ 0.18
SLC38A1-202ENST00000439706 ARHGEF11O15085 1522 aa16.2■□□□□ 0.18
SLC38A1-202ENST00000439706 ROCK2O75116 1388 aaKnown RBP16.2■□□□□ 0.18
SLC38A1-202ENST00000439706 HECW1Q76N89 1606 aa16.2■□□□□ 0.18
SLC38A1-202ENST00000439706 POGKQ9P215 609 aa16.19■□□□□ 0.18
SLC38A1-202ENST00000439706 KTN1Q86UP2 1357 aaKnown RBP16.19■□□□□ 0.18
SLC38A1-202ENST00000439706 GCC2Q8IWJ2 1684 aa16.19■□□□□ 0.18
SLC38A1-202ENST00000439706 URB2Q14146 1524 aaKnown RBP16.19■□□□□ 0.18
SLC38A1-202ENST00000439706 TEX14Q8IWB6 1497 aa16.18■□□□□ 0.18
SLC38A1-202ENST00000439706 NEUROD2Q15784 382 aa16.18■□□□□ 0.18
SLC38A1-202ENST00000439706 DNAJC5BQ9UF47 199 aa16.18■□□□□ 0.18
SLC38A1-202ENST00000439706 ABCA5Q8WWZ7 1642 aa16.18■□□□□ 0.18
SLC38A1-202ENST00000439706 WDR43Q15061 677 aaKnown RBP eCLIP16.18■□□□□ 0.18
SLC38A1-202ENST00000439706 GAPVD1Q14C86 1478 aa16.18■□□□□ 0.18
SLC38A1-202ENST00000439706 CANXP27824 592 aaKnown RBP16.17■□□□□ 0.18
SLC38A1-202ENST00000439706 FAM161AQ3B820 660 aa16.17■□□□□ 0.18
SLC38A1-202ENST00000439706 TCOF1Q13428 1488 aaKnown RBP16.17■□□□□ 0.18
SLC38A1-202ENST00000439706 BRD4O60885 1362 aaPredicted RBP16.16■□□□□ 0.18
SLC38A1-202ENST00000439706 ABCC5O15440 1437 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms