RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 KDM2AQ9Y2K7 1162 aa21.11■□□□□ 0.97
DHFR-201ENST00000439211 DNMBPQ6XZF7 1577 aa21.1■□□□□ 0.97
DHFR-201ENST00000439211 CHMP7Q8WUX9 453 aaPredicted RBP21.09■□□□□ 0.97
DHFR-201ENST00000439211 HFM1A2PYH4 1435 aa21.09■□□□□ 0.97
DHFR-201ENST00000439211 PPM1GO15355 546 aaPredicted RBP21.09■□□□□ 0.97
DHFR-201ENST00000439211 PTPRKQ15262 1439 aa21.08■□□□□ 0.97
DHFR-201ENST00000439211 ABCA10Q8WWZ4 1543 aa21.07■□□□□ 0.96
DHFR-201ENST00000439211 CCDC184Q52MB2 194 aa21.07■□□□□ 0.96
DHFR-201ENST00000439211 CFDP1Q9UEE9 299 aaPredicted RBP21.07■□□□□ 0.96
DHFR-201ENST00000439211 NAIPQ13075 1403 aa21.06■□□□□ 0.96
DHFR-201ENST00000439211 EFCAB5A4FU69 1503 aa21.05■□□□□ 0.96
DHFR-201ENST00000439211 SLC24A1O60721 1099 aa21.05■□□□□ 0.96
DHFR-201ENST00000439211 TMC1Q8TDI8 760 aa21.04■□□□□ 0.96
DHFR-201ENST00000439211 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.04■□□□□ 0.962e-9■■■■■ 39.6
DHFR-201ENST00000439211 ZNF644Q9H582 1327 aaPredicted RBP21.03■□□□□ 0.96
DHFR-201ENST00000439211 PRKRIP1Q9H875 184 aaPredicted RBP21.03■□□□□ 0.96
DHFR-201ENST00000439211 AQRO60306 1485 aaKnown RBP eCLIP21.02■□□□□ 0.962e-19■■■□□ 14.9
DHFR-201ENST00000439211 ZMYND15Q9H091 742 aa21■□□□□ 0.95
DHFR-201ENST00000439211 USP35Q9P2H5 1018 aa20.99■□□□□ 0.95
DHFR-201ENST00000439211 URB2Q14146 1524 aaKnown RBP20.99■□□□□ 0.95
DHFR-201ENST00000439211 NAP1L5Q96NT1 182 aaPredicted RBP20.98■□□□□ 0.95
DHFR-201ENST00000439211 GSE1Q14687 1217 aa20.97■□□□□ 0.95
DHFR-201ENST00000439211 C11orf95C9JLR9 678 aaPredicted RBP20.96■□□□□ 0.95
DHFR-201ENST00000439211 NBPF8Q3BBV2 869 aa20.94■□□□□ 0.94
DHFR-201ENST00000439211 PKD2Q13563 968 aa20.94■□□□□ 0.94
DHFR-201ENST00000439211 ARXQ96QS3 562 aa20.93■□□□□ 0.94
DHFR-201ENST00000439211 A0A0U1RQG5 324 aaPredicted RBP20.93■□□□□ 0.94
DHFR-201ENST00000439211 CARD11Q9BXL7 1154 aa20.92■□□□□ 0.94
DHFR-201ENST00000439211 TSPY4P0CV99 314 aa20.91■□□□□ 0.94
DHFR-201ENST00000439211 TSPY10P0CW01 314 aa20.91■□□□□ 0.94
DHFR-201ENST00000439211 CFAP43Q8NDM7 1665 aa20.9■□□□□ 0.94
DHFR-201ENST00000439211 CCDC7Q96M83 1385 aa20.9■□□□□ 0.94
DHFR-201ENST00000439211 ERCC6Q03468 1493 aa20.9■□□□□ 0.94
DHFR-201ENST00000439211 PTPN23Q9H3S7 1636 aa20.89■□□□□ 0.94
DHFR-201ENST00000439211 HSP90AA2PQ14568 343 aaPredicted RBP20.89■□□□□ 0.93
DHFR-201ENST00000439211 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.89■□□□□ 0.934e-9■□□□□ 9.5
DHFR-201ENST00000439211 KIF7Q2M1P5 1343 aa20.89■□□□□ 0.93
DHFR-201ENST00000439211 RGL3Q3MIN7 710 aa20.88■□□□□ 0.93
DHFR-201ENST00000439211 CNTLNQ9NXG0 1405 aa20.87■□□□□ 0.93
DHFR-201ENST00000439211 PRDM2Q13029 1718 aa20.86■□□□□ 0.93
DHFR-201ENST00000439211 PLEKHD1A6NEE1 506 aa20.85■□□□□ 0.93
DHFR-201ENST00000439211 LAMC3Q9Y6N6 1575 aa20.85■□□□□ 0.93
DHFR-201ENST00000439211 SNAPC4Q5SXM2 1469 aa20.85■□□□□ 0.93
DHFR-201ENST00000439211 EHBP1L1Q8N3D4 1523 aa20.84■□□□□ 0.93
DHFR-201ENST00000439211 CUL7Q14999 1698 aa20.83■□□□□ 0.93
DHFR-201ENST00000439211 CDK13Q14004 1512 aaKnown RBP20.83■□□□□ 0.93
DHFR-201ENST00000439211 DCAF11Q8TEB1 546 aa20.83■□□□□ 0.92
DHFR-201ENST00000439211 SUPT6HQ7KZ85 1726 aaKnown RBP20.83■□□□□ 0.92
DHFR-201ENST00000439211 HSP90AA1P07900 732 aaKnown RBP20.82■□□□□ 0.92
DHFR-201ENST00000439211 ZBED9Q6R2W3 1325 aa20.82■□□□□ 0.92
DHFR-201ENST00000439211 ARID4BQ4LE39 1312 aaPredicted RBP20.81■□□□□ 0.92
DHFR-201ENST00000439211 FRAT1Q92837 279 aaPredicted RBP20.8■□□□□ 0.92
DHFR-201ENST00000439211 GRIN2BQ13224 1484 aa20.78■□□□□ 0.92
DHFR-201ENST00000439211 EPRSP07814 1512 aaKnown RBP20.77■□□□□ 0.91
DHFR-201ENST00000439211 NUP155O75694 1391 aa20.76■□□□□ 0.91
DHFR-201ENST00000439211 DDRGK1Q96HY6 314 aa20.76■□□□□ 0.91
DHFR-201ENST00000439211 USP47Q96K76 1375 aa20.74■□□□□ 0.91
DHFR-201ENST00000439211 NUDCQ9Y266 331 aa20.73■□□□□ 0.91
DHFR-201ENST00000439211 CTTNBP2Q8WZ74 1663 aa20.73■□□□□ 0.91
DHFR-201ENST00000439211 ST20-MTHFSA0A0A6YYL1 179 aa20.72■□□□□ 0.91
DHFR-201ENST00000439211 FAM43AQ8N2R8 423 aa20.72■□□□□ 0.91
DHFR-201ENST00000439211 PNNQ9H307 717 aaKnown RBP20.72■□□□□ 0.91
DHFR-201ENST00000439211 MIA2Q96PC5 1412 aa20.71■□□□□ 0.91
DHFR-201ENST00000439211 SLC4A3P48751 1232 aa20.71■□□□□ 0.91
DHFR-201ENST00000439211 NFKBIBQ15653 356 aa20.71■□□□□ 0.91
DHFR-201ENST00000439211 ANKRD30BQ9BXX2 1392 aa20.7■□□□□ 0.9
DHFR-201ENST00000439211 JPH4Q96JJ6 628 aa20.7■□□□□ 0.9
DHFR-201ENST00000439211 WASHC2CQ9Y4E1 1318 aa20.7■□□□□ 0.9
DHFR-201ENST00000439211 HNRNPMP52272 730 aaKnown RBP eCLIP20.69■□□□□ 0.9
DHFR-201ENST00000439211 ANKRD30AQ9BXX3 1397 aa20.69■□□□□ 0.9
DHFR-201ENST00000439211 UGGT2Q9NYU1 1516 aa20.69■□□□□ 0.9
DHFR-201ENST00000439211 CC2D1BQ5T0F9 858 aaKnown RBP20.69■□□□□ 0.9
DHFR-201ENST00000439211 MRC2Q9UBG0 1479 aa20.68■□□□□ 0.9
DHFR-201ENST00000439211 DAPK1P53355 1430 aa20.68■□□□□ 0.9
DHFR-201ENST00000439211 AKNAQ7Z591 1439 aa20.66■□□□□ 0.9
DHFR-201ENST00000439211 HECW1Q76N89 1606 aa20.66■□□□□ 0.9
DHFR-201ENST00000439211 NCOA1Q15788 1441 aa20.65■□□□□ 0.9
DHFR-201ENST00000439211 PRG4Q92954 1404 aaPredicted RBP20.65■□□□□ 0.9
DHFR-201ENST00000439211 ZNF608Q9ULD9 1512 aaPredicted RBP20.65■□□□□ 0.9
DHFR-201ENST00000439211 PDE4AP27815 886 aa20.65■□□□□ 0.9
DHFR-201ENST00000439211 ABCC5O15440 1437 aa20.63■□□□□ 0.89
DHFR-201ENST00000439211 MAGI3Q5TCQ9 1506 aa20.63■□□□□ 0.89
DHFR-201ENST00000439211 THOC2Q8NI27 1593 aaKnown RBP20.62■□□□□ 0.89
DHFR-201ENST00000439211 IQGAP2Q13576 1575 aa20.61■□□□□ 0.89
DHFR-201ENST00000439211 CARMIL2Q6F5E8 1435 aa20.6■□□□□ 0.89
DHFR-201ENST00000439211 ROCK2O75116 1388 aaKnown RBP20.6■□□□□ 0.89
DHFR-201ENST00000439211 TCERG1O14776 1098 aaKnown RBP20.6■□□□□ 0.89
DHFR-201ENST00000439211 RPRD2Q5VT52 1461 aaKnown RBP20.59■□□□□ 0.89
DHFR-201ENST00000439211 KIF21AQ7Z4S6 1674 aa20.59■□□□□ 0.89
DHFR-201ENST00000439211 RCAN3Q9UKA8 241 aa20.56■□□□□ 0.88
DHFR-201ENST00000439211 ANKRD50Q9ULJ7 1429 aa20.56■□□□□ 0.88
DHFR-201ENST00000439211 IFT140Q96RY7 1462 aa20.56■□□□□ 0.88
DHFR-201ENST00000439211 ROCK1Q13464 1354 aa20.56■□□□□ 0.88
DHFR-201ENST00000439211 SAMD9Q5K651 1589 aa20.55■□□□□ 0.88
DHFR-201ENST00000439211 KDM6BO15054 1643 aa20.55■□□□□ 0.88
DHFR-201ENST00000439211 ABCA5Q8WWZ7 1642 aa20.54■□□□□ 0.88
DHFR-201ENST00000439211 PNISRQ8TF01 805 aaKnown RBP20.54■□□□□ 0.88
DHFR-201ENST00000439211 RRP9O43818 475 aaKnown RBP20.53■□□□□ 0.88
DHFR-201ENST00000439211 TCOF1Q13428 1488 aaKnown RBP20.53■□□□□ 0.88
DHFR-201ENST00000439211 RALBP1Q15311 655 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms