RNA–Protein interactions for RNA: ENST00000438929.5

BDNF-210, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-210ENST00000438929 WASHC2AQ641Q2 1341 aa8.07□□□□□ -1.12
BDNF-210ENST00000438929 ZNF777Q9ULD5 760 aaPredicted RBP8.07□□□□□ -1.12
BDNF-210ENST00000438929 L3MBTL2Q969R5 705 aa8.07□□□□□ -1.12
BDNF-210ENST00000438929 PDIA4P13667 645 aaKnown RBP8.06□□□□□ -1.12
BDNF-210ENST00000438929 VSIG10Q8N0Z9 540 aa8.06□□□□□ -1.12
BDNF-210ENST00000438929 AKNAQ7Z591 1439 aa8.06□□□□□ -1.12
BDNF-210ENST00000438929 SLKQ9H2G2 1235 aaPredicted RBP8.05□□□□□ -1.12
BDNF-210ENST00000438929 TARBP1Q13395 1621 aaKnown RBP8.05□□□□□ -1.12
BDNF-210ENST00000438929 RRBP1Q9P2E9 1410 aaKnown RBP8.05□□□□□ -1.12
BDNF-210ENST00000438929 PLIN1O60240 522 aa8.05□□□□□ -1.12
BDNF-210ENST00000438929 NFKBIBQ15653 356 aa8.05□□□□□ -1.12
BDNF-210ENST00000438929 FRAT1Q92837 279 aaPredicted RBP8.04□□□□□ -1.12
BDNF-210ENST00000438929 A0A0G2JS52 829 aa8.04□□□□□ -1.12
BDNF-210ENST00000438929 BECN1Q14457 450 aa8.04□□□□□ -1.12
BDNF-210ENST00000438929 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.04□□□□□ -1.12
BDNF-210ENST00000438929 RSPH6AQ9H0K4 717 aa8.04□□□□□ -1.12
BDNF-210ENST00000438929 CUX1P39880 1505 aa8.04□□□□□ -1.12
BDNF-210ENST00000438929 NPM1P06748 294 aaKnown RBP eCLIP8.03□□□□□ -1.12
BDNF-210ENST00000438929 GZF1Q9H116 711 aaPredicted RBP8.03□□□□□ -1.12
BDNF-210ENST00000438929 TRIM44Q96DX7 344 aaPredicted RBP8.03□□□□□ -1.12
BDNF-210ENST00000438929 SPRYD3Q8NCJ5 442 aa8.03□□□□□ -1.12
BDNF-210ENST00000438929 PNNQ9H307 717 aaKnown RBP8.03□□□□□ -1.12
BDNF-210ENST00000438929 HSP90AA1P07900 732 aaKnown RBP8.03□□□□□ -1.12
BDNF-210ENST00000438929 CARD11Q9BXL7 1154 aa8.02□□□□□ -1.13
BDNF-210ENST00000438929 ARAP1Q96P48 1450 aa8.02□□□□□ -1.13
BDNF-210ENST00000438929 PHLDB1Q86UU1 1377 aa8.02□□□□□ -1.13
BDNF-210ENST00000438929 ARHGAP35Q9NRY4 1499 aa8.02□□□□□ -1.13
BDNF-210ENST00000438929 RRP1P56182 461 aaKnown RBP8.02□□□□□ -1.13
BDNF-210ENST00000438929 WDR43Q15061 677 aaKnown RBP eCLIP8.02□□□□□ -1.13
BDNF-210ENST00000438929 ANP32BQ92688 251 aaKnown RBP8.01□□□□□ -1.13
BDNF-210ENST00000438929 TOPBP1Q92547 1522 aa8.01□□□□□ -1.13
BDNF-210ENST00000438929 CC2D1BQ5T0F9 858 aaKnown RBP8.01□□□□□ -1.13
BDNF-210ENST00000438929 FHAD1B1AJZ9 1412 aa8□□□□□ -1.13
BDNF-210ENST00000438929 MPHOSPH9Q99550 1183 aa8□□□□□ -1.13
BDNF-210ENST00000438929 SYNJ1O43426 1573 aa8□□□□□ -1.13
BDNF-210ENST00000438929 HSP90AA2PQ14568 343 aaPredicted RBP7.99□□□□□ -1.13
BDNF-210ENST00000438929 SKAP1Q86WV1 359 aa7.99□□□□□ -1.13
BDNF-210ENST00000438929 DNMBPQ6XZF7 1577 aa7.99□□□□□ -1.13
BDNF-210ENST00000438929 FRAT2O75474 233 aaPredicted RBP7.99□□□□□ -1.13
BDNF-210ENST00000438929 BIVM-ERCC5R4GMW8 1640 aa7.99□□□□□ -1.13
BDNF-210ENST00000438929 L1TD1Q5T7N2 865 aaKnown RBP7.99□□□□□ -1.13
BDNF-210ENST00000438929 BACH2Q9BYV9 841 aa7.98□□□□□ -1.13
BDNF-210ENST00000438929 CARMIL1Q5VZK9 1371 aa7.98□□□□□ -1.13
BDNF-210ENST00000438929 ZNF608Q9ULD9 1512 aaPredicted RBP7.98□□□□□ -1.13
BDNF-210ENST00000438929 CNTLNQ9NXG0 1405 aa7.98□□□□□ -1.13
BDNF-210ENST00000438929 IFT140Q96RY7 1462 aa7.98□□□□□ -1.13
BDNF-210ENST00000438929 CCDC7Q96M83 1385 aa7.98□□□□□ -1.13
BDNF-210ENST00000438929 MS4A1P11836 297 aa7.98□□□□□ -1.13
BDNF-210ENST00000438929 KIF7Q2M1P5 1343 aa7.97□□□□□ -1.13
BDNF-210ENST00000438929 CRBNQ96SW2 442 aa7.97□□□□□ -1.13
BDNF-210ENST00000438929 RGL3Q3MIN7 710 aa7.97□□□□□ -1.13
BDNF-210ENST00000438929 CCDC18Q5T9S5 1454 aa7.97□□□□□ -1.13
BDNF-210ENST00000438929 FMN1Q68DA7 1419 aa7.96□□□□□ -1.13
BDNF-210ENST00000438929 ARID3AQ99856 593 aa7.96□□□□□ -1.14
BDNF-210ENST00000438929 C11orf95C9JLR9 678 aaPredicted RBP7.96□□□□□ -1.14
BDNF-210ENST00000438929 POLA1P09884 1462 aaPredicted RBP7.95□□□□□ -1.14
BDNF-210ENST00000438929 EIF4G3O43432 1585 aaKnown RBP7.95□□□□□ -1.14
BDNF-210ENST00000438929 GOLGA6L3A6NEY3 463 aa7.94□□□□□ -1.14
BDNF-210ENST00000438929 TULP1O00294 542 aaPredicted RBP7.94□□□□□ -1.14
BDNF-210ENST00000438929 FAM161AQ3B820 660 aa7.94□□□□□ -1.14
BDNF-210ENST00000438929 FHOD3Q2V2M9 1422 aa7.94□□□□□ -1.14
BDNF-210ENST00000438929 MAPKBP1O60336 1514 aa7.94□□□□□ -1.14
BDNF-210ENST00000438929 TOP2BQ02880 1626 aa7.94□□□□□ -1.14
BDNF-210ENST00000438929 CDCA7LQ96GN5 454 aa7.94□□□□□ -1.14
BDNF-210ENST00000438929 NEUROD2Q15784 382 aa7.93□□□□□ -1.14
BDNF-210ENST00000438929 RAD54L2Q9Y4B4 1467 aa7.93□□□□□ -1.14
BDNF-210ENST00000438929 DCAF11Q8TEB1 546 aa7.93□□□□□ -1.14
BDNF-210ENST00000438929 BCL11BQ9C0K0 894 aaPredicted RBP7.93□□□□□ -1.14
BDNF-210ENST00000438929 LRRC9Q6ZRR7 1453 aa7.92□□□□□ -1.14
BDNF-210ENST00000438929 ABCA5Q8WWZ7 1642 aa7.92□□□□□ -1.14
BDNF-210ENST00000438929 FAM43AQ8N2R8 423 aa7.92□□□□□ -1.14
BDNF-210ENST00000438929 SMG6Q86US8 1419 aaKnown RBP7.92□□□□□ -1.14
BDNF-210ENST00000438929 UACAQ9BZF9 1416 aa7.92□□□□□ -1.14
BDNF-210ENST00000438929 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.92□□□□□ -1.14
BDNF-210ENST00000438929 NLRP13Q86W25 1043 aa7.91□□□□□ -1.14
BDNF-210ENST00000438929 NCLP19338 710 aaKnown RBP7.91□□□□□ -1.14
BDNF-210ENST00000438929 PDE3BQ13370 1112 aa7.91□□□□□ -1.14
BDNF-210ENST00000438929 RALBP1Q15311 655 aa7.91□□□□□ -1.14
BDNF-210ENST00000438929 MYH16Q9H6N6 1097 aa7.91□□□□□ -1.14
BDNF-210ENST00000438929 FGD5Q6ZNL6 1462 aa7.91□□□□□ -1.14
BDNF-210ENST00000438929 ST20-MTHFSA0A0A6YYL1 179 aa7.9□□□□□ -1.14
BDNF-210ENST00000438929 HAP1P54257 671 aaPredicted RBP7.9□□□□□ -1.14
BDNF-210ENST00000438929 NBPF8Q3BBV2 869 aa7.9□□□□□ -1.14
BDNF-210ENST00000438929 CENPQQ7L2Z9 268 aaPredicted RBP7.9□□□□□ -1.14
BDNF-210ENST00000438929 PBRM1Q86U86 1689 aa7.9□□□□□ -1.14
BDNF-210ENST00000438929 PNISRQ8TF01 805 aaKnown RBP7.9□□□□□ -1.15
BDNF-210ENST00000438929 KTN1Q86UP2 1357 aaKnown RBP7.89□□□□□ -1.15
BDNF-210ENST00000438929 MYBBP1AQ9BQG0 1328 aaKnown RBP7.89□□□□□ -1.15
BDNF-210ENST00000438929 PKD2Q13563 968 aa7.89□□□□□ -1.15
BDNF-210ENST00000438929 KNSTRNQ9Y448 316 aa7.89□□□□□ -1.15
BDNF-210ENST00000438929 CHD1O14646 1710 aa7.89□□□□□ -1.15
BDNF-210ENST00000438929 POGKQ9P215 609 aa7.89□□□□□ -1.15
BDNF-210ENST00000438929 USP47Q96K76 1375 aa7.88□□□□□ -1.15
BDNF-210ENST00000438929 PRXQ9BXM0 1461 aa7.88□□□□□ -1.15
BDNF-210ENST00000438929 ZBTB7CA1YPR0 619 aa7.88□□□□□ -1.15
BDNF-210ENST00000438929 FGD6Q6ZV73 1430 aa7.87□□□□□ -1.15
BDNF-210ENST00000438929 KIF15Q9NS87 1388 aa7.87□□□□□ -1.15
BDNF-210ENST00000438929 TSPY4P0CV99 314 aa7.87□□□□□ -1.15
BDNF-210ENST00000438929 TSPY10P0CW01 314 aa7.87□□□□□ -1.15
BDNF-210ENST00000438929 MSNP26038 577 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms