RNA–Protein interactions for RNA: ENST00000421503.6

CCDC117-202, Transcript of coiled-coil domain containing 117, humanhuman

TSL 2 BASIC

Gene CCDC117, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-202ENST00000421503 ST20-MTHFSA0A0A6YYL1 179 aa19.06■□□□□ 0.64
CCDC117-202ENST00000421503 FYCO1Q9BQS8 1478 aa19.05■□□□□ 0.64
CCDC117-202ENST00000421503 FANCIQ9NVI1 1328 aa19.05■□□□□ 0.64
CCDC117-202ENST00000421503 POLA1P09884 1462 aaPredicted RBP19.05■□□□□ 0.64
CCDC117-202ENST00000421503 HMGXB3Q12766 1538 aa19.05■□□□□ 0.64
CCDC117-202ENST00000421503 PAK3O75914 559 aaPredicted RBP19.03■□□□□ 0.64
CCDC117-202ENST00000421503 CNTLNQ9NXG0 1405 aa19.02■□□□□ 0.63
CCDC117-202ENST00000421503 ERICH6BQ5W0A0 696 aa19.01■□□□□ 0.63
CCDC117-202ENST00000421503 SENP3Q9H4L4 574 aaPredicted RBP19.01■□□□□ 0.63
CCDC117-202ENST00000421503 AKNAQ7Z591 1439 aa19.01■□□□□ 0.63
CCDC117-202ENST00000421503 PLIN1O60240 522 aa19.01■□□□□ 0.63
CCDC117-202ENST00000421503 GAPVD1Q14C86 1478 aa19.01■□□□□ 0.63
CCDC117-202ENST00000421503 NUP155O75694 1391 aa19■□□□□ 0.63
CCDC117-202ENST00000421503 EXOC6Q8TAG9 804 aa18.99■□□□□ 0.63
CCDC117-202ENST00000421503 PDS5BQ9NTI5 1447 aa18.98■□□□□ 0.63
CCDC117-202ENST00000421503 HNRNPMP52272 730 aaKnown RBP eCLIP18.98■□□□□ 0.63
CCDC117-202ENST00000421503 USP47Q96K76 1375 aa18.97■□□□□ 0.63
CCDC117-202ENST00000421503 TOPBP1Q92547 1522 aa18.96■□□□□ 0.63
CCDC117-202ENST00000421503 RCAN3Q9UKA8 241 aa18.96■□□□□ 0.63
CCDC117-202ENST00000421503 NEFMP07197 916 aa18.95■□□□□ 0.62
CCDC117-202ENST00000421503 CANXP27824 592 aaKnown RBP18.94■□□□□ 0.62
CCDC117-202ENST00000421503 MAP3K1Q13233 1512 aa18.93■□□□□ 0.62
CCDC117-202ENST00000421503 RGS3P49796 1198 aa18.93■□□□□ 0.62
CCDC117-202ENST00000421503 WDR43Q15061 677 aaKnown RBP eCLIP18.93■□□□□ 0.62
CCDC117-202ENST00000421503 IPO9Q96P70 1041 aaKnown RBP18.91■□□□□ 0.62
CCDC117-202ENST00000421503 CHGAP10645 457 aaKnown RBP18.9■□□□□ 0.62
CCDC117-202ENST00000421503 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.89■□□□□ 0.62
CCDC117-202ENST00000421503 SKAP1Q86WV1 359 aa18.89■□□□□ 0.61
CCDC117-202ENST00000421503 CDCA7LQ96GN5 454 aa18.89■□□□□ 0.61
CCDC117-202ENST00000421503 ARXQ96QS3 562 aa18.89■□□□□ 0.61
CCDC117-202ENST00000421503 CDK13Q14004 1512 aaKnown RBP18.88■□□□□ 0.61
CCDC117-202ENST00000421503 SLC4A3P48751 1232 aa18.87■□□□□ 0.61
CCDC117-202ENST00000421503 ROCK2O75116 1388 aaKnown RBP18.87■□□□□ 0.61
CCDC117-202ENST00000421503 NEUROD2Q15784 382 aa18.86■□□□□ 0.61
CCDC117-202ENST00000421503 EFCAB5A4FU69 1503 aa18.84■□□□□ 0.61
CCDC117-202ENST00000421503 PTPN23Q9H3S7 1636 aa18.84■□□□□ 0.61
CCDC117-202ENST00000421503 ABCA10Q8WWZ4 1543 aa18.83■□□□□ 0.61
CCDC117-202ENST00000421503 PNISRQ8TF01 805 aaKnown RBP18.83■□□□□ 0.6
CCDC117-202ENST00000421503 KNSTRNQ9Y448 316 aa18.83■□□□□ 0.6
CCDC117-202ENST00000421503 TNNT2P45379 298 aaPredicted RBP18.83■□□□□ 0.6
CCDC117-202ENST00000421503 RRP1P56182 461 aaKnown RBP18.82■□□□□ 0.6
CCDC117-202ENST00000421503 ANKRD30AQ9BXX3 1397 aa18.82■□□□□ 0.6
CCDC117-202ENST00000421503 CC2D2AQ9P2K1 1620 aa18.81■□□□□ 0.6
CCDC117-202ENST00000421503 PDE4AP27815 886 aa18.81■□□□□ 0.6
CCDC117-202ENST00000421503 ANKRD30BQ9BXX2 1392 aa18.8■□□□□ 0.6
CCDC117-202ENST00000421503 JPH4Q96JJ6 628 aa18.8■□□□□ 0.6
CCDC117-202ENST00000421503 NBPF1Q3BBV0 1214 aa18.8■□□□□ 0.6
CCDC117-202ENST00000421503 NLRP13Q86W25 1043 aa18.8■□□□□ 0.6
CCDC117-202ENST00000421503 EIF5BO60841 1220 aaKnown RBP18.79■□□□□ 0.6
CCDC117-202ENST00000421503 RALBP1Q15311 655 aa18.79■□□□□ 0.6
CCDC117-202ENST00000421503 PANK3Q9H999 370 aa18.79■□□□□ 0.6
CCDC117-202ENST00000421503 KTN1Q86UP2 1357 aaKnown RBP18.79■□□□□ 0.6
CCDC117-202ENST00000421503 MYBBP1AQ9BQG0 1328 aaKnown RBP18.78■□□□□ 0.6
CCDC117-202ENST00000421503 PRG4Q92954 1404 aaPredicted RBP18.77■□□□□ 0.6
CCDC117-202ENST00000421503 CRBNQ96SW2 442 aa18.77■□□□□ 0.6
CCDC117-202ENST00000421503 CCDC146Q8IYE0 955 aa18.77■□□□□ 0.6
CCDC117-202ENST00000421503 NCOA1Q15788 1441 aa18.76■□□□□ 0.59
CCDC117-202ENST00000421503 DNMBPQ6XZF7 1577 aa18.76■□□□□ 0.59
CCDC117-202ENST00000421503 KIF15Q9NS87 1388 aa18.75■□□□□ 0.59
CCDC117-202ENST00000421503 EPRSP07814 1512 aaKnown RBP18.74■□□□□ 0.59
CCDC117-202ENST00000421503 TCERG1O14776 1098 aaKnown RBP18.74■□□□□ 0.59
CCDC117-202ENST00000421503 TMF1P82094 1093 aa18.74■□□□□ 0.59
CCDC117-202ENST00000421503 EHBP1L1Q8N3D4 1523 aa18.74■□□□□ 0.59
CCDC117-202ENST00000421503 FRAT1Q92837 279 aaPredicted RBP18.72■□□□□ 0.59
CCDC117-202ENST00000421503 DAPK1P53355 1430 aa18.72■□□□□ 0.59
CCDC117-202ENST00000421503 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.72■□□□□ 0.59
CCDC117-202ENST00000421503 SUPT6HQ7KZ85 1726 aaKnown RBP18.71■□□□□ 0.59
CCDC117-202ENST00000421503 SNAPC4Q5SXM2 1469 aa18.71■□□□□ 0.59
CCDC117-202ENST00000421503 URB2Q14146 1524 aaKnown RBP18.71■□□□□ 0.59
CCDC117-202ENST00000421503 PRDM2Q13029 1718 aa18.7■□□□□ 0.58
CCDC117-202ENST00000421503 ABCC5O15440 1437 aa18.7■□□□□ 0.58
CCDC117-202ENST00000421503 ANKRD50Q9ULJ7 1429 aa18.69■□□□□ 0.58
CCDC117-202ENST00000421503 GRIN2BQ13224 1484 aa18.67■□□□□ 0.58
CCDC117-202ENST00000421503 PPM1GO15355 546 aaPredicted RBP18.66■□□□□ 0.58
CCDC117-202ENST00000421503 SMG6Q86US8 1419 aaKnown RBP18.66■□□□□ 0.58
CCDC117-202ENST00000421503 MIA2Q96PC5 1412 aa18.66■□□□□ 0.58
CCDC117-202ENST00000421503 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.66■□□□□ 0.58
CCDC117-202ENST00000421503 DDRGK1Q96HY6 314 aa18.65■□□□□ 0.58
CCDC117-202ENST00000421503 CFAP43Q8NDM7 1665 aa18.64■□□□□ 0.58
CCDC117-202ENST00000421503 ADAMTS8Q9UP79 889 aa18.64■□□□□ 0.57
CCDC117-202ENST00000421503 RPRD2Q5VT52 1461 aaKnown RBP18.64■□□□□ 0.57
CCDC117-202ENST00000421503 ERCC6Q03468 1493 aa18.62■□□□□ 0.57
CCDC117-202ENST00000421503 IL27Q8NEV9 243 aa18.62■□□□□ 0.57
CCDC117-202ENST00000421503 KIAA1107Q9UPP5 1409 aa18.62■□□□□ 0.57
CCDC117-202ENST00000421503 SPRYD3Q8NCJ5 442 aa18.61■□□□□ 0.57
CCDC117-202ENST00000421503 THOC2Q8NI27 1593 aaKnown RBP18.61■□□□□ 0.57
CCDC117-202ENST00000421503 C20orf194Q5TEA3 1177 aa18.6■□□□□ 0.57
CCDC117-202ENST00000421503 PDE3BQ13370 1112 aa18.6■□□□□ 0.57
CCDC117-202ENST00000421503 CCDC144AA2RUR9 1427 aa18.59■□□□□ 0.57
CCDC117-202ENST00000421503 UGGT2Q9NYU1 1516 aa18.59■□□□□ 0.57
CCDC117-202ENST00000421503 CARMIL2Q6F5E8 1435 aa18.59■□□□□ 0.57
CCDC117-202ENST00000421503 RRP7AQ9Y3A4 280 aaKnown RBP18.58■□□□□ 0.57
CCDC117-202ENST00000421503 GOLGA2Q08379 1002 aa18.58■□□□□ 0.56
CCDC117-202ENST00000421503 MAGI3Q5TCQ9 1506 aa18.58■□□□□ 0.56
CCDC117-202ENST00000421503 APAF1O14727 1248 aa18.58■□□□□ 0.56
CCDC117-202ENST00000421503 SLKQ9H2G2 1235 aaPredicted RBP18.57■□□□□ 0.56
CCDC117-202ENST00000421503 KDM6BO15054 1643 aa18.56■□□□□ 0.56
CCDC117-202ENST00000421503 CLUAP1Q96AJ1 413 aa18.56■□□□□ 0.56
CCDC117-202ENST00000421503 BCL2L13Q9BXK5 485 aa18.56■□□□□ 0.56
CCDC117-202ENST00000421503 BRD4O60885 1362 aaPredicted RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms