RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 CCDC7Q96M83 1385 aa17.73■□□□□ 0.43
TNFRSF8-203ENST00000417814 EXOC6Q8TAG9 804 aa17.72■□□□□ 0.43
TNFRSF8-203ENST00000417814 BIVM-ERCC5R4GMW8 1640 aa17.72■□□□□ 0.43
TNFRSF8-203ENST00000417814 ARXQ96QS3 562 aa17.72■□□□□ 0.43
TNFRSF8-203ENST00000417814 TSPY4P0CV99 314 aa17.71■□□□□ 0.43
TNFRSF8-203ENST00000417814 TSPY10P0CW01 314 aa17.71■□□□□ 0.43
TNFRSF8-203ENST00000417814 CASKIN1Q8WXD9 1431 aa17.71■□□□□ 0.43
TNFRSF8-203ENST00000417814 CDCA7LQ96GN5 454 aa17.71■□□□□ 0.43
TNFRSF8-203ENST00000417814 MYOM3Q5VTT5 1437 aa17.71■□□□□ 0.43
TNFRSF8-203ENST00000417814 TNNT2P45379 298 aaPredicted RBP17.66■□□□□ 0.42
TNFRSF8-203ENST00000417814 CDK13Q14004 1512 aaKnown RBP17.66■□□□□ 0.42
TNFRSF8-203ENST00000417814 DAXXQ9UER7 740 aaPredicted RBP17.66■□□□□ 0.42
TNFRSF8-203ENST00000417814 NEUROD2Q15784 382 aa17.65■□□□□ 0.42
TNFRSF8-203ENST00000417814 NUP155O75694 1391 aa17.65■□□□□ 0.42
TNFRSF8-203ENST00000417814 HFM1A2PYH4 1435 aa17.65■□□□□ 0.42
TNFRSF8-203ENST00000417814 RGS3P49796 1198 aa17.64■□□□□ 0.41
TNFRSF8-203ENST00000417814 PLEKHD1A6NEE1 506 aa17.64■□□□□ 0.41
TNFRSF8-203ENST00000417814 GAPVD1Q14C86 1478 aa17.64■□□□□ 0.41
TNFRSF8-203ENST00000417814 NUDCQ9Y266 331 aa17.63■□□□□ 0.41
TNFRSF8-203ENST00000417814 TOPBP1Q92547 1522 aa17.63■□□□□ 0.41
TNFRSF8-203ENST00000417814 NBPF1Q3BBV0 1214 aa17.63■□□□□ 0.41
TNFRSF8-203ENST00000417814 CHGAP10645 457 aaKnown RBP17.62■□□□□ 0.41
TNFRSF8-203ENST00000417814 ZBED9Q6R2W3 1325 aa17.62■□□□□ 0.41
TNFRSF8-203ENST00000417814 USP47Q96K76 1375 aa17.61■□□□□ 0.41
TNFRSF8-203ENST00000417814 ANO8Q9HCE9 1232 aaPredicted RBP17.6■□□□□ 0.41
TNFRSF8-203ENST00000417814 CNTLNQ9NXG0 1405 aa17.6■□□□□ 0.41
TNFRSF8-203ENST00000417814 FYCO1Q9BQS8 1478 aa17.58■□□□□ 0.41
TNFRSF8-203ENST00000417814 CCDC146Q8IYE0 955 aa17.58■□□□□ 0.4
TNFRSF8-203ENST00000417814 NEFMP07197 916 aa17.57■□□□□ 0.4
TNFRSF8-203ENST00000417814 RCAN3Q9UKA8 241 aa17.56■□□□□ 0.4
TNFRSF8-203ENST00000417814 HMGXB3Q12766 1538 aa17.55■□□□□ 0.4
TNFRSF8-203ENST00000417814 CC2D2AQ9P2K1 1620 aa17.55■□□□□ 0.4
TNFRSF8-203ENST00000417814 FANCIQ9NVI1 1328 aa17.55■□□□□ 0.4
TNFRSF8-203ENST00000417814 PRG4Q92954 1404 aaPredicted RBP17.55■□□□□ 0.4
TNFRSF8-203ENST00000417814 PNISRQ8TF01 805 aaKnown RBP17.51■□□□□ 0.39
TNFRSF8-203ENST00000417814 PANK3Q9H999 370 aa17.51■□□□□ 0.39
TNFRSF8-203ENST00000417814 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.5■□□□□ 0.39
TNFRSF8-203ENST00000417814 ROCK2O75116 1388 aaKnown RBP17.5■□□□□ 0.39
TNFRSF8-203ENST00000417814 PTPN23Q9H3S7 1636 aa17.5■□□□□ 0.39
TNFRSF8-203ENST00000417814 CANXP27824 592 aaKnown RBP17.5■□□□□ 0.39
TNFRSF8-203ENST00000417814 JPH4Q96JJ6 628 aa17.49■□□□□ 0.39
TNFRSF8-203ENST00000417814 CRBNQ96SW2 442 aa17.49■□□□□ 0.39
TNFRSF8-203ENST00000417814 IPO9Q96P70 1041 aaKnown RBP17.48■□□□□ 0.39
TNFRSF8-203ENST00000417814 WDR43Q15061 677 aaKnown RBP eCLIP17.48■□□□□ 0.39
TNFRSF8-203ENST00000417814 C20orf194Q5TEA3 1177 aa17.47■□□□□ 0.39
TNFRSF8-203ENST00000417814 ANKRD30BQ9BXX2 1392 aa17.46■□□□□ 0.39
TNFRSF8-203ENST00000417814 URB2Q14146 1524 aaKnown RBP17.46■□□□□ 0.39
TNFRSF8-203ENST00000417814 KDM6BO15054 1643 aa17.46■□□□□ 0.39
TNFRSF8-203ENST00000417814 IL27Q8NEV9 243 aa17.46■□□□□ 0.39
TNFRSF8-203ENST00000417814 RRP1P56182 461 aaKnown RBP17.45■□□□□ 0.38
TNFRSF8-203ENST00000417814 NUTM2DQ5VT03 806 aaPredicted RBP17.45■□□□□ 0.38
TNFRSF8-203ENST00000417814 PDE4AP27815 886 aa17.45■□□□□ 0.38
TNFRSF8-203ENST00000417814 SPRYD3Q8NCJ5 442 aa17.45■□□□□ 0.38
TNFRSF8-203ENST00000417814 FRAT1Q92837 279 aaPredicted RBP17.44■□□□□ 0.38
TNFRSF8-203ENST00000417814 EIF5BO60841 1220 aaKnown RBP17.44■□□□□ 0.38
TNFRSF8-203ENST00000417814 PRDM2Q13029 1718 aa17.43■□□□□ 0.38
TNFRSF8-203ENST00000417814 ABCA10Q8WWZ4 1543 aa17.43■□□□□ 0.38
TNFRSF8-203ENST00000417814 SAFB2Q14151 953 aaKnown RBP eCLIP17.42■□□□□ 0.38
TNFRSF8-203ENST00000417814 MAGI3Q5TCQ9 1506 aa17.42■□□□□ 0.38
TNFRSF8-203ENST00000417814 RRP7AQ9Y3A4 280 aaKnown RBP17.41■□□□□ 0.38
TNFRSF8-203ENST00000417814 SNAPC4Q5SXM2 1469 aa17.41■□□□□ 0.38
TNFRSF8-203ENST00000417814 KNSTRNQ9Y448 316 aa17.4■□□□□ 0.38
TNFRSF8-203ENST00000417814 EPRSP07814 1512 aaKnown RBP17.4■□□□□ 0.38
TNFRSF8-203ENST00000417814 BCL2L13Q9BXK5 485 aa17.4■□□□□ 0.38
TNFRSF8-203ENST00000417814 ABCC5O15440 1437 aa17.39■□□□□ 0.38
TNFRSF8-203ENST00000417814 NCOA1Q15788 1441 aa17.39■□□□□ 0.38
TNFRSF8-203ENST00000417814 ADAMTS8Q9UP79 889 aa17.39■□□□□ 0.37
TNFRSF8-203ENST00000417814 THOC2Q8NI27 1593 aaKnown RBP17.38■□□□□ 0.37
TNFRSF8-203ENST00000417814 MAP3K1Q13233 1512 aa17.38■□□□□ 0.37
TNFRSF8-203ENST00000417814 DAPK1P53355 1430 aa17.38■□□□□ 0.37
TNFRSF8-203ENST00000417814 ZNF608Q9ULD9 1512 aaPredicted RBP17.37■□□□□ 0.37
TNFRSF8-203ENST00000417814 ANKRD30AQ9BXX3 1397 aa17.36■□□□□ 0.37
TNFRSF8-203ENST00000417814 MYBBP1AQ9BQG0 1328 aaKnown RBP17.36■□□□□ 0.37
TNFRSF8-203ENST00000417814 NLRP13Q86W25 1043 aa17.36■□□□□ 0.37
TNFRSF8-203ENST00000417814 CLUAP1Q96AJ1 413 aa17.36■□□□□ 0.37
TNFRSF8-203ENST00000417814 PLB1Q6P1J6 1458 aa17.35■□□□□ 0.37
TNFRSF8-203ENST00000417814 DNMBPQ6XZF7 1577 aa17.35■□□□□ 0.37
TNFRSF8-203ENST00000417814 KTN1Q86UP2 1357 aaKnown RBP17.34■□□□□ 0.37
TNFRSF8-203ENST00000417814 ERICH6BQ5W0A0 696 aa17.34■□□□□ 0.37
TNFRSF8-203ENST00000417814 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.34■□□□□ 0.37
TNFRSF8-203ENST00000417814 GRIN2BQ13224 1484 aa17.33■□□□□ 0.36
TNFRSF8-203ENST00000417814 ANKRD50Q9ULJ7 1429 aa17.33■□□□□ 0.36
TNFRSF8-203ENST00000417814 DENND4BO75064 1496 aaPredicted RBP17.32■□□□□ 0.36
TNFRSF8-203ENST00000417814 EFCAB5A4FU69 1503 aa17.32■□□□□ 0.36
TNFRSF8-203ENST00000417814 SLKQ9H2G2 1235 aaPredicted RBP17.32■□□□□ 0.36
TNFRSF8-203ENST00000417814 APAF1O14727 1248 aa17.31■□□□□ 0.36
TNFRSF8-203ENST00000417814 SUPT6HQ7KZ85 1726 aaKnown RBP17.3■□□□□ 0.36
TNFRSF8-203ENST00000417814 TMF1P82094 1093 aa17.3■□□□□ 0.36
TNFRSF8-203ENST00000417814 KIF15Q9NS87 1388 aa17.3■□□□□ 0.36
TNFRSF8-203ENST00000417814 RALBP1Q15311 655 aa17.29■□□□□ 0.36
TNFRSF8-203ENST00000417814 ERCC6Q03468 1493 aa17.29■□□□□ 0.36
TNFRSF8-203ENST00000417814 EHBP1L1Q8N3D4 1523 aa17.28■□□□□ 0.36
TNFRSF8-203ENST00000417814 BCAR3O75815 825 aa17.27■□□□□ 0.36
TNFRSF8-203ENST00000417814 DHX29Q7Z478 1369 aaKnown RBP17.27■□□□□ 0.35
TNFRSF8-203ENST00000417814 RPRD2Q5VT52 1461 aaKnown RBP17.26■□□□□ 0.35
TNFRSF8-203ENST00000417814 CFAP43Q8NDM7 1665 aa17.26■□□□□ 0.35
TNFRSF8-203ENST00000417814 BRPF3Q9ULD4 1205 aa17.26■□□□□ 0.35
TNFRSF8-203ENST00000417814 AFAP1Q8N556 730 aa17.24■□□□□ 0.35
TNFRSF8-203ENST00000417814 SMG6Q86US8 1419 aaKnown RBP17.24■□□□□ 0.35
TNFRSF8-203ENST00000417814 UGGT2Q9NYU1 1516 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms