RNA–Protein interactions for RNA: ENST00000416603.1

THUMPD3-202, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-202ENST00000416603 IRX5P78411 483 aaPredicted RBP12.3□□□□□ -0.44
THUMPD3-202ENST00000416603 CCDC88BA6NC98 1476 aa12.27□□□□□ -0.44
THUMPD3-202ENST00000416603 BCL11BQ9C0K0 894 aaPredicted RBP12.27□□□□□ -0.45
THUMPD3-202ENST00000416603 STK25O00506 426 aa12.26□□□□□ -0.45
THUMPD3-202ENST00000416603 OCEL1Q9H607 264 aa12.26□□□□□ -0.45
THUMPD3-202ENST00000416603 EFCAB3Q8N7B9 438 aa12.25□□□□□ -0.45
THUMPD3-202ENST00000416603 STK24Q9Y6E0 443 aa12.25□□□□□ -0.45
THUMPD3-202ENST00000416603 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.24□□□□□ -0.452e-6■■■■□ 22.9
THUMPD3-202ENST00000416603 TOPBP1Q92547 1522 aa12.22□□□□□ -0.45
THUMPD3-202ENST00000416603 IFT140Q96RY7 1462 aa12.22□□□□□ -0.45
THUMPD3-202ENST00000416603 AMER1Q5JTC6 1135 aaPredicted RBP12.22□□□□□ -0.45
THUMPD3-202ENST00000416603 POTEJP0CG39 1038 aa12.21□□□□□ -0.45
THUMPD3-202ENST00000416603 EIF4G3O43432 1585 aaKnown RBP12.21□□□□□ -0.46
THUMPD3-202ENST00000416603 ZNF608Q9ULD9 1512 aaPredicted RBP12.21□□□□□ -0.46
THUMPD3-202ENST00000416603 PDCD7Q8N8D1 485 aaKnown RBP12.2□□□□□ -0.46
THUMPD3-202ENST00000416603 DNMBPQ6XZF7 1577 aa12.2□□□□□ -0.46
THUMPD3-202ENST00000416603 RIMBP3CA6NJZ7 1639 aa12.18□□□□□ -0.46
THUMPD3-202ENST00000416603 RIMBP3BA6NNM3 1639 aa12.18□□□□□ -0.46
THUMPD3-202ENST00000416603 RIMBP3Q9UFD9 1639 aa12.18□□□□□ -0.46
THUMPD3-202ENST00000416603 ABCC8Q09428 1581 aa12.18□□□□□ -0.46
THUMPD3-202ENST00000416603 MAMSTRQ6ZN01 415 aa12.17□□□□□ -0.46
THUMPD3-202ENST00000416603 OTUD5Q96G74 571 aa12.17□□□□□ -0.46
THUMPD3-202ENST00000416603 ILDR1Q86SU0 546 aaPredicted RBP12.16□□□□□ -0.46
THUMPD3-202ENST00000416603 SCUBE2Q9NQ36 999 aa12.16□□□□□ -0.46
THUMPD3-202ENST00000416603 RTN4Q9NQC3 1192 aaKnown RBP12.16□□□□□ -0.46
THUMPD3-202ENST00000416603 CHD1O14646 1710 aa12.16□□□□□ -0.46
THUMPD3-202ENST00000416603 SOX12O15370 315 aa12.15□□□□□ -0.46
THUMPD3-202ENST00000416603 TARBP1Q13395 1621 aaKnown RBP12.13□□□□□ -0.47
THUMPD3-202ENST00000416603 CHGAP10645 457 aaKnown RBP12.13□□□□□ -0.47
THUMPD3-202ENST00000416603 HS6ST3Q8IZP7 471 aa12.13□□□□□ -0.47
THUMPD3-202ENST00000416603 PHF8Q9UPP1 1060 aa12.13□□□□□ -0.47
THUMPD3-202ENST00000416603 DPY19L2Q6NUT2 758 aa12.11□□□□□ -0.47
THUMPD3-202ENST00000416603 ARHGEF11O15085 1522 aa12.11□□□□□ -0.47
THUMPD3-202ENST00000416603 L3MBTL3Q96JM7 780 aaPredicted RBP12.1□□□□□ -0.47
THUMPD3-202ENST00000416603 POLA1P09884 1462 aaPredicted RBP12.08□□□□□ -0.47
THUMPD3-202ENST00000416603 NLRP6P59044 892 aa12.08□□□□□ -0.48
THUMPD3-202ENST00000416603 AQRO60306 1485 aaKnown RBP eCLIP12.08□□□□□ -0.488e-7■■■□□ 16.1
THUMPD3-202ENST00000416603 MFRPQ9BY79 579 aa12.07□□□□□ -0.48
THUMPD3-202ENST00000416603 G3V3G9 751 aa12.06□□□□□ -0.48
THUMPD3-202ENST00000416603 MS4A4AQ96JQ5 239 aa12.06□□□□□ -0.48
THUMPD3-202ENST00000416603 RAD54L2Q9Y4B4 1467 aa12.04□□□□□ -0.48
THUMPD3-202ENST00000416603 C3orf67Q6ZVT6 689 aa12.04□□□□□ -0.48
THUMPD3-202ENST00000416603 FBXO22Q8NEZ5 403 aa12.04□□□□□ -0.48
THUMPD3-202ENST00000416603 BOLA1Q9Y3E2 137 aa12.04□□□□□ -0.48
THUMPD3-202ENST00000416603 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.03□□□□□ -0.48
THUMPD3-202ENST00000416603 FGD5Q6ZNL6 1462 aa12.02□□□□□ -0.48
THUMPD3-202ENST00000416603 SOGA1O94964 1423 aa12.01□□□□□ -0.49
THUMPD3-202ENST00000416603 WDR97A6NE52 1622 aa12□□□□□ -0.49
THUMPD3-202ENST00000416603 SLAIN1Q8ND83 568 aa12□□□□□ -0.49
THUMPD3-202ENST00000416603 CUX1P39880 1505 aa12□□□□□ -0.49
THUMPD3-202ENST00000416603 TDRD9Q8NDG6 1382 aaKnown RBP11.99□□□□□ -0.49
THUMPD3-202ENST00000416603 SNAPC4Q5SXM2 1469 aa11.99□□□□□ -0.49
THUMPD3-202ENST00000416603 PBRM1Q86U86 1689 aa11.99□□□□□ -0.49
THUMPD3-202ENST00000416603 ARAP1Q96P48 1450 aa11.97□□□□□ -0.49
THUMPD3-202ENST00000416603 CYB5RLQ6IPT4 315 aa11.97□□□□□ -0.49
THUMPD3-202ENST00000416603 MICALL2Q8IY33 904 aa11.96□□□□□ -0.49
THUMPD3-202ENST00000416603 NKX1-1Q15270 411 aaPredicted RBP11.95□□□□□ -0.5
THUMPD3-202ENST00000416603 TMEM121BQ9BXQ6 578 aaPredicted RBP11.95□□□□□ -0.5
THUMPD3-202ENST00000416603 SYNJ1O43426 1573 aa11.95□□□□□ -0.5
THUMPD3-202ENST00000416603 CLASP1Q7Z460 1538 aa11.94□□□□□ -0.5
THUMPD3-202ENST00000416603 MAGI1Q96QZ7 1491 aaPredicted RBP11.94□□□□□ -0.5
THUMPD3-202ENST00000416603 GRIN2BQ13224 1484 aa11.93□□□□□ -0.5
THUMPD3-202ENST00000416603 CHMP7Q8WUX9 453 aaPredicted RBP11.91□□□□□ -0.5
THUMPD3-202ENST00000416603 SYNJ2O15056 1496 aa11.89□□□□□ -0.51
THUMPD3-202ENST00000416603 SUPT5HO00267 1087 aaKnown RBP11.89□□□□□ -0.51
THUMPD3-202ENST00000416603 ABCA5Q8WWZ7 1642 aa11.89□□□□□ -0.51
THUMPD3-202ENST00000416603 GAPVD1Q14C86 1478 aa11.89□□□□□ -0.51
THUMPD3-202ENST00000416603 PPP1R37O75864 691 aa11.88□□□□□ -0.51
THUMPD3-202ENST00000416603 RYDENQ9NUL5 291 aaKnown RBP11.88□□□□□ -0.51
THUMPD3-202ENST00000416603 ABCA10Q8WWZ4 1543 aa11.85□□□□□ -0.51
THUMPD3-202ENST00000416603 BIVM-ERCC5R4GMW8 1640 aa11.83□□□□□ -0.52
THUMPD3-202ENST00000416603 TMEM92Q6UXU6 159 aa11.82□□□□□ -0.52
THUMPD3-202ENST00000416603 ADAMTS12P58397 1594 aa11.81□□□□□ -0.52
THUMPD3-202ENST00000416603 GTPBP6O43824 516 aaPredicted RBP11.81□□□□□ -0.52
THUMPD3-202ENST00000416603 TOP2BQ02880 1626 aa11.8□□□□□ -0.52
THUMPD3-202ENST00000416603 BBXQ8WY36 941 aaPredicted RBP11.8□□□□□ -0.52
THUMPD3-202ENST00000416603 FAM163AQ96GL9 167 aaPredicted RBP11.8□□□□□ -0.52
THUMPD3-202ENST00000416603 SNPHO15079 494 aa11.79□□□□□ -0.52
THUMPD3-202ENST00000416603 WRNQ14191 1432 aaPredicted RBP eCLIP11.78□□□□□ -0.52
THUMPD3-202ENST00000416603 GRIN2AQ12879 1464 aa11.78□□□□□ -0.52
THUMPD3-202ENST00000416603 CEP170Q5SW79 1584 aa11.76□□□□□ -0.53
THUMPD3-202ENST00000416603 ERCC6L2Q5T890 1561 aa11.75□□□□□ -0.53
THUMPD3-202ENST00000416603 LCE2DQ5TA82 110 aaPredicted RBP11.74□□□□□ -0.53
THUMPD3-202ENST00000416603 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.73□□□□□ -0.53
THUMPD3-202ENST00000416603 ERICH3Q5RHP9 1530 aa11.72□□□□□ -0.53
THUMPD3-202ENST00000416603 C2orf72A6NCS6 295 aa11.72□□□□□ -0.53
THUMPD3-202ENST00000416603 SHROOM2Q13796 1616 aa11.71□□□□□ -0.53
THUMPD3-202ENST00000416603 FHAD1B1AJZ9 1412 aa11.71□□□□□ -0.53
THUMPD3-202ENST00000416603 NUP160Q12769 1436 aa11.71□□□□□ -0.53
THUMPD3-202ENST00000416603 ST18O60284 1047 aa11.71□□□□□ -0.53
THUMPD3-202ENST00000416603 TMC2Q8TDI7 906 aa11.71□□□□□ -0.53
THUMPD3-202ENST00000416603 KIF3CO14782 793 aa11.7□□□□□ -0.54
THUMPD3-202ENST00000416603 HOXB3P14651 431 aaPredicted RBP11.68□□□□□ -0.54
THUMPD3-202ENST00000416603 DOK7Q18PE1 504 aa11.68□□□□□ -0.54
THUMPD3-202ENST00000416603 POTEMA6NI47 508 aa11.66□□□□□ -0.54
THUMPD3-202ENST00000416603 SPRYD3Q8NCJ5 442 aa11.66□□□□□ -0.54
THUMPD3-202ENST00000416603 RUSC2Q8N2Y8 1516 aa11.65□□□□□ -0.54
THUMPD3-202ENST00000416603 POTEGQ6S5H5 508 aa11.65□□□□□ -0.54
THUMPD3-202ENST00000416603 ZNF710Q8N1W2 664 aa11.65□□□□□ -0.54
THUMPD3-202ENST00000416603 PAXIP1Q6ZW49 1069 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms