RNA–Protein interactions for RNA: ENST00000416603.1

THUMPD3-202, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-202ENST00000416603 AEBP2Q6ZN18 517 aaPredicted RBP25.66■■□□□ 1.7
THUMPD3-202ENST00000416603 CHIC1Q5VXU3 224 aa24.84■■□□□ 1.57
THUMPD3-202ENST00000416603 SENP3Q9H4L4 574 aaPredicted RBP21.84■■□□□ 1.09
THUMPD3-202ENST00000416603 PHF23Q9BUL5 403 aaPredicted RBP21.8■■□□□ 1.08
THUMPD3-202ENST00000416603 FOXD1Q16676 465 aa20.28■□□□□ 0.84
THUMPD3-202ENST00000416603 PLPPR3Q6T4P5 718 aa20.08■□□□□ 0.81
THUMPD3-202ENST00000416603 PPP6R1Q9UPN7 881 aa19.31■□□□□ 0.68
THUMPD3-202ENST00000416603 ADRA2BP18089 450 aa19.3■□□□□ 0.68
THUMPD3-202ENST00000416603 PIAS4Q8N2W9 510 aaPredicted RBP19.1■□□□□ 0.65
THUMPD3-202ENST00000416603 MSH5O43196 834 aa18.82■□□□□ 0.6
THUMPD3-202ENST00000416603 PPP4R3CPQ6ZMV5 832 aa17.66■□□□□ 0.42
THUMPD3-202ENST00000416603 SCAF1Q9H7N4 1312 aaKnown RBP17.66■□□□□ 0.42
THUMPD3-202ENST00000416603 MAPK8IP2Q13387 824 aaPredicted RBP17.57■□□□□ 0.4
THUMPD3-202ENST00000416603 POTEDQ86YR6 584 aa17.56■□□□□ 0.4
THUMPD3-202ENST00000416603 DMRT2Q9Y5R5 561 aa17.38■□□□□ 0.37
THUMPD3-202ENST00000416603 CNKSR2Q8WXI2 1034 aa17.22■□□□□ 0.35
THUMPD3-202ENST00000416603 NCBP3Q53F19 620 aaKnown RBP17.12■□□□□ 0.33
THUMPD3-202ENST00000416603 KCNA4P22459 653 aa16.97■□□□□ 0.31
THUMPD3-202ENST00000416603 HOXD11P31277 338 aaPredicted RBP16.92■□□□□ 0.3
THUMPD3-202ENST00000416603 RNF216Q9NWF9 866 aaPredicted RBP16.92■□□□□ 0.3
THUMPD3-202ENST00000416603 NPM3O75607 178 aaKnown RBP16.87■□□□□ 0.29
THUMPD3-202ENST00000416603 DCAF8L1A6NGE4 600 aa16.69■□□□□ 0.26
THUMPD3-202ENST00000416603 NISCHQ9Y2I1 1504 aa16.54■□□□□ 0.24
THUMPD3-202ENST00000416603 DNAJC5BQ9UF47 199 aa16.36■□□□□ 0.21
THUMPD3-202ENST00000416603 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.16■□□□□ 0.18
THUMPD3-202ENST00000416603 SLC4A1APQ9BWU0 796 aaKnown RBP16.13■□□□□ 0.17
THUMPD3-202ENST00000416603 RNF39Q9H2S5 420 aa16.08■□□□□ 0.16
THUMPD3-202ENST00000416603 SLC4A2P04920 1241 aa15.97■□□□□ 0.15
THUMPD3-202ENST00000416603 C1QBPQ07021 282 aaKnown RBP15.88■□□□□ 0.13
THUMPD3-202ENST00000416603 CACNB1Q02641 598 aaPredicted RBP15.87■□□□□ 0.13
THUMPD3-202ENST00000416603 U3KPZ7 1027 aaPredicted RBP15.86■□□□□ 0.13
THUMPD3-202ENST00000416603 FOXD4L1Q9NU39 408 aa15.71■□□□□ 0.11
THUMPD3-202ENST00000416603 MYCNP04198 464 aaPredicted RBP15.61■□□□□ 0.09
THUMPD3-202ENST00000416603 ZBTB22O15209 634 aa15.6■□□□□ 0.09
THUMPD3-202ENST00000416603 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.57■□□□□ 0.08
THUMPD3-202ENST00000416603 HNRNPUL2Q1KMD3 747 aaKnown RBP15.57■□□□□ 0.08
THUMPD3-202ENST00000416603 SAMD1Q6SPF0 538 aaPredicted RBP15.51■□□□□ 0.07
THUMPD3-202ENST00000416603 APLP2Q06481 763 aa15.49■□□□□ 0.07
THUMPD3-202ENST00000416603 SPINK5Q9NQ38 1064 aaPredicted RBP15.49■□□□□ 0.07
THUMPD3-202ENST00000416603 CAPN15O75808 1086 aa15.46■□□□□ 0.07
THUMPD3-202ENST00000416603 EHMT2Q96KQ7 1210 aa15.41■□□□□ 0.06
THUMPD3-202ENST00000416603 TRHP20396 242 aaPredicted RBP15.33■□□□□ 0.04
THUMPD3-202ENST00000416603 CSRNP3Q8WYN3 585 aa15.31■□□□□ 0.04
THUMPD3-202ENST00000416603 ZNF219Q9P2Y4 722 aaPredicted RBP15.31■□□□□ 0.04
THUMPD3-202ENST00000416603 DSG3P32926 999 aa15.23■□□□□ 0.03
THUMPD3-202ENST00000416603 ATF5Q9Y2D1 282 aaPredicted RBP15.19■□□□□ 0.02
THUMPD3-202ENST00000416603 ABCB7O75027 752 aa15.15■□□□□ 0.02
THUMPD3-202ENST00000416603 ATXN8OSP0DMR3 200 aa15.15■□□□□ 0.02
THUMPD3-202ENST00000416603 POLA2Q14181 598 aa15□□□□□ -0.01
THUMPD3-202ENST00000416603 ABCC9O60706 1549 aa14.94□□□□□ -0.02
THUMPD3-202ENST00000416603 CCDC180Q9P1Z9 1646 aa14.94□□□□□ -0.02
THUMPD3-202ENST00000416603 ZBTB12Q9Y330 459 aaPredicted RBP14.75□□□□□ -0.05
THUMPD3-202ENST00000416603 FBLN2P98095 1184 aa14.6□□□□□ -0.07
THUMPD3-202ENST00000416603 RBM42Q9BTD8 480 aaKnown RBP14.54□□□□□ -0.08
THUMPD3-202ENST00000416603 OSCARQ8IYS5 282 aa14.53□□□□□ -0.08
THUMPD3-202ENST00000416603 MKRN4PQ13434 485 aaPredicted RBP14.51□□□□□ -0.09
THUMPD3-202ENST00000416603 SPDYE2BA6NHP3 402 aa14.32□□□□□ -0.12
THUMPD3-202ENST00000416603 SPDYE6P0CI01 402 aa14.32□□□□□ -0.12
THUMPD3-202ENST00000416603 SPDYE2Q495Y8 402 aa14.32□□□□□ -0.12
THUMPD3-202ENST00000416603 AKT1S1Q96B36 256 aa14.29□□□□□ -0.12
THUMPD3-202ENST00000416603 ZNF692Q9BU19 519 aaPredicted RBP14.23□□□□□ -0.13
THUMPD3-202ENST00000416603 RB1CC1Q8TDY2 1594 aa14.22□□□□□ -0.13
THUMPD3-202ENST00000416603 SSUH2Q9Y2M2 353 aa14.18□□□□□ -0.14
THUMPD3-202ENST00000416603 REM2Q8IYK8 340 aaPredicted RBP14.15□□□□□ -0.14
THUMPD3-202ENST00000416603 SPDYE4A6NLX3 237 aa14.09□□□□□ -0.15
THUMPD3-202ENST00000416603 NACADO15069 1562 aa14.07□□□□□ -0.16
THUMPD3-202ENST00000416603 PABPN1Q86U42 306 aaKnown RBP eCLIP14.04□□□□□ -0.16
THUMPD3-202ENST00000416603 CHRDL2Q6WN34 429 aa14.02□□□□□ -0.17
THUMPD3-202ENST00000416603 PITPNM1O00562 1244 aa14.01□□□□□ -0.17
THUMPD3-202ENST00000416603 DCAF8L2P0C7V8 631 aa13.99□□□□□ -0.17
THUMPD3-202ENST00000416603 SPDYE1Q8NFV5 336 aaPredicted RBP13.97□□□□□ -0.17
THUMPD3-202ENST00000416603 UNC13AQ9UPW8 1703 aa13.97□□□□□ -0.17
THUMPD3-202ENST00000416603 CLEC11AQ9Y240 323 aa13.94□□□□□ -0.18
THUMPD3-202ENST00000416603 FKBP8Q14318 412 aa13.89□□□□□ -0.19
THUMPD3-202ENST00000416603 POTEHQ6S545 545 aa13.86□□□□□ -0.19
THUMPD3-202ENST00000416603 MYO15BQ96JP2 1530 aa13.81□□□□□ -0.2
THUMPD3-202ENST00000416603 PROM2Q8N271 834 aa13.79□□□□□ -0.2
THUMPD3-202ENST00000416603 PIP4P2Q8N4L2 257 aa13.79□□□□□ -0.2
THUMPD3-202ENST00000416603 BICRAQ9NZM4 1560 aa13.78□□□□□ -0.2
THUMPD3-202ENST00000416603 FXR2P51116 673 aaKnown RBP eCLIP13.77□□□□□ -0.21
THUMPD3-202ENST00000416603 PRR29P0C7W0 189 aa13.76□□□□□ -0.21
THUMPD3-202ENST00000416603 STAG3Q9UJ98 1225 aa13.75□□□□□ -0.21
THUMPD3-202ENST00000416603 ZCCHC6Q5VYS8 1495 aaKnown RBP13.71□□□□□ -0.21
THUMPD3-202ENST00000416603 PRKAR2AP13861 404 aaKnown RBP13.66□□□□□ -0.22
THUMPD3-202ENST00000416603 DCAF1Q9Y4B6 1507 aa13.64□□□□□ -0.23
THUMPD3-202ENST00000416603 SCRIBQ14160 1630 aa13.62□□□□□ -0.23
THUMPD3-202ENST00000416603 CHADLQ6NUI6 762 aa13.61□□□□□ -0.23
THUMPD3-202ENST00000416603 SHROOM4Q9ULL8 1493 aa13.57□□□□□ -0.24
THUMPD3-202ENST00000416603 CC2D2AQ9P2K1 1620 aa13.51□□□□□ -0.25
THUMPD3-202ENST00000416603 CREBZFQ9NS37 354 aa13.51□□□□□ -0.25
THUMPD3-202ENST00000416603 EIF4G1Q04637 1599 aaKnown RBP13.45□□□□□ -0.26
THUMPD3-202ENST00000416603 FBXO3Q9UK99 471 aa13.45□□□□□ -0.26
THUMPD3-202ENST00000416603 CECR2Q9BXF3 1484 aa13.44□□□□□ -0.26
THUMPD3-202ENST00000416603 FARP1Q9Y4F1 1045 aaPredicted RBP13.44□□□□□ -0.26
THUMPD3-202ENST00000416603 HAX1O00165 279 aa13.42□□□□□ -0.26
THUMPD3-202ENST00000416603 MIER1Q8N108 512 aa13.38□□□□□ -0.27
THUMPD3-202ENST00000416603 PLEKHG5O94827 1062 aa13.37□□□□□ -0.27
THUMPD3-202ENST00000416603 PLCD3Q8N3E9 789 aa13.36□□□□□ -0.27
THUMPD3-202ENST00000416603 MNX1P50219 401 aaPredicted RBP13.32□□□□□ -0.28
THUMPD3-202ENST00000416603 C19orf67A6NJJ6 358 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms