RNA–Protein interactions for RNA: ENST00000409767.5

PBRM1-207, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-207ENST00000409767 DENND4BO75064 1496 aaPredicted RBP8.6□□□□□ -1.03
PBRM1-207ENST00000409767 A0A0G2JS52 829 aa8.59□□□□□ -1.03
PBRM1-207ENST00000409767 MYT1Q01538 1121 aa8.59□□□□□ -1.03
PBRM1-207ENST00000409767 AFAP1Q8N556 730 aa8.59□□□□□ -1.03
PBRM1-207ENST00000409767 LMOD2Q6P5Q4 547 aa8.59□□□□□ -1.04
PBRM1-207ENST00000409767 PLEKHH2Q8IVE3 1493 aa8.58□□□□□ -1.04
PBRM1-207ENST00000409767 CANXP27824 592 aaKnown RBP8.58□□□□□ -1.04
PBRM1-207ENST00000409767 MEX3CQ5U5Q3 659 aaKnown RBP8.58□□□□□ -1.04
PBRM1-207ENST00000409767 KDM2AQ9Y2K7 1162 aa8.58□□□□□ -1.04
PBRM1-207ENST00000409767 CEP170Q5SW79 1584 aa8.58□□□□□ -1.04
PBRM1-207ENST00000409767 BIVM-ERCC5R4GMW8 1640 aa8.58□□□□□ -1.04
PBRM1-207ENST00000409767 ANKLE2Q86XL3 938 aa8.57□□□□□ -1.04
PBRM1-207ENST00000409767 ABCC2Q92887 1545 aa8.57□□□□□ -1.04
PBRM1-207ENST00000409767 ARHGAP35Q9NRY4 1499 aa8.57□□□□□ -1.04
PBRM1-207ENST00000409767 EFCAB5A4FU69 1503 aa8.57□□□□□ -1.04
PBRM1-207ENST00000409767 FOXD1Q16676 465 aa8.57□□□□□ -1.04
PBRM1-207ENST00000409767 POGKQ9P215 609 aa8.57□□□□□ -1.04
PBRM1-207ENST00000409767 ARAP1Q96P48 1450 aa8.56□□□□□ -1.04
PBRM1-207ENST00000409767 WDR7Q9Y4E6 1490 aa8.56□□□□□ -1.04
PBRM1-207ENST00000409767 EIF4G2P78344 907 aaKnown RBP eCLIP8.56□□□□□ -1.04
PBRM1-207ENST00000409767 PLEKHG5O94827 1062 aa8.56□□□□□ -1.04
PBRM1-207ENST00000409767 TARBP1Q13395 1621 aaKnown RBP8.56□□□□□ -1.04
PBRM1-207ENST00000409767 VPS8Q8N3P4 1428 aa8.56□□□□□ -1.04
PBRM1-207ENST00000409767 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.55□□□□□ -1.04
PBRM1-207ENST00000409767 CHD1O14646 1710 aa8.54□□□□□ -1.04
PBRM1-207ENST00000409767 TROQ12816 1431 aaPredicted RBP8.54□□□□□ -1.04
PBRM1-207ENST00000409767 PRXQ9BXM0 1461 aa8.54□□□□□ -1.04
PBRM1-207ENST00000409767 PBRM1Q86U86 1689 aa8.54□□□□□ -1.04
PBRM1-207ENST00000409767 RIMBP3CA6NJZ7 1639 aa8.54□□□□□ -1.04
PBRM1-207ENST00000409767 RIMBP3BA6NNM3 1639 aa8.54□□□□□ -1.04
PBRM1-207ENST00000409767 RIMBP3Q9UFD9 1639 aa8.54□□□□□ -1.04
PBRM1-207ENST00000409767 RGL3Q3MIN7 710 aa8.54□□□□□ -1.04
PBRM1-207ENST00000409767 PPP6R1Q9UPN7 881 aa8.53□□□□□ -1.04
PBRM1-207ENST00000409767 ADGRL1O94910 1474 aa8.53□□□□□ -1.04
PBRM1-207ENST00000409767 ATF3P18847 181 aa8.52□□□□□ -1.05
PBRM1-207ENST00000409767 TIMELESSQ9UNS1 1208 aa8.52□□□□□ -1.05
PBRM1-207ENST00000409767 ZBTB7CA1YPR0 619 aa8.52□□□□□ -1.05
PBRM1-207ENST00000409767 PIP4K2BP78356 416 aa8.51□□□□□ -1.05
PBRM1-207ENST00000409767 WDR43Q15061 677 aaKnown RBP eCLIP8.51□□□□□ -1.05
PBRM1-207ENST00000409767 TMC1Q8TDI8 760 aa8.51□□□□□ -1.05
PBRM1-207ENST00000409767 CASKIN1Q8WXD9 1431 aa8.5□□□□□ -1.05
PBRM1-207ENST00000409767 FANCAO15360 1455 aa8.5□□□□□ -1.05
PBRM1-207ENST00000409767 TXNDC2Q86VQ3 553 aa8.5□□□□□ -1.05
PBRM1-207ENST00000409767 PROSER2Q86WR7 435 aaPredicted RBP8.5□□□□□ -1.05
PBRM1-207ENST00000409767 HECW1Q76N89 1606 aa8.5□□□□□ -1.05
PBRM1-207ENST00000409767 TOM1O60784 492 aa8.5□□□□□ -1.05
PBRM1-207ENST00000409767 ABCA5Q8WWZ7 1642 aa8.5□□□□□ -1.05
PBRM1-207ENST00000409767 CCDC9Q9Y3X0 531 aaKnown RBP8.5□□□□□ -1.05
PBRM1-207ENST00000409767 UBAP1LF5GYI3 381 aa8.49□□□□□ -1.05
PBRM1-207ENST00000409767 NUP155O75694 1391 aa8.48□□□□□ -1.05
PBRM1-207ENST00000409767 NPM2Q86SE8 214 aaKnown RBP8.48□□□□□ -1.05
PBRM1-207ENST00000409767 CFAP53Q96M91 514 aa8.48□□□□□ -1.05
PBRM1-207ENST00000409767 ABCC10Q5T3U5 1492 aa8.47□□□□□ -1.05
PBRM1-207ENST00000409767 UGGT2Q9NYU1 1516 aa8.47□□□□□ -1.05
PBRM1-207ENST00000409767 MYOM3Q5VTT5 1437 aa8.47□□□□□ -1.05
PBRM1-207ENST00000409767 CEBPAP49715 358 aaPredicted RBP8.47□□□□□ -1.05
PBRM1-207ENST00000409767 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.47□□□□□ -1.05
PBRM1-207ENST00000409767 CARD11Q9BXL7 1154 aa8.46□□□□□ -1.05
PBRM1-207ENST00000409767 DDX10Q13206 875 aaKnown RBP8.46□□□□□ -1.05
PBRM1-207ENST00000409767 VGFO15240 615 aaPredicted RBP8.45□□□□□ -1.06
PBRM1-207ENST00000409767 HSPA2P54652 639 aa8.45□□□□□ -1.06
PBRM1-207ENST00000409767 KNSTRNQ9Y448 316 aa8.45□□□□□ -1.06
PBRM1-207ENST00000409767 KDM6BO15054 1643 aa8.44□□□□□ -1.06
PBRM1-207ENST00000409767 FYCO1Q9BQS8 1478 aa8.44□□□□□ -1.06
PBRM1-207ENST00000409767 KIF21BO75037 1637 aa8.44□□□□□ -1.06
PBRM1-207ENST00000409767 ATP10BO94823 1461 aa8.44□□□□□ -1.06
PBRM1-207ENST00000409767 STK26Q9P289 416 aa8.44□□□□□ -1.06
PBRM1-207ENST00000409767 UHRF1BP1LA0JNW5 1464 aa8.44□□□□□ -1.06
PBRM1-207ENST00000409767 EPRSP07814 1512 aaKnown RBP8.44□□□□□ -1.06
PBRM1-207ENST00000409767 SETD5Q9C0A6 1442 aa8.43□□□□□ -1.06
PBRM1-207ENST00000409767 DCAF8L1A6NGE4 600 aa8.43□□□□□ -1.06
PBRM1-207ENST00000409767 UHRF1BP1Q6BDS2 1440 aa8.43□□□□□ -1.06
PBRM1-207ENST00000409767 KIF14Q15058 1648 aa8.43□□□□□ -1.06
PBRM1-207ENST00000409767 PKD2Q13563 968 aa8.42□□□□□ -1.06
PBRM1-207ENST00000409767 KANK4Q5T7N3 995 aaPredicted RBP8.42□□□□□ -1.06
PBRM1-207ENST00000409767 SLC52A1Q9NWF4 448 aa8.42□□□□□ -1.06
PBRM1-207ENST00000409767 KIF15Q9NS87 1388 aa8.42□□□□□ -1.06
PBRM1-207ENST00000409767 KIAA0556O60303 1618 aa8.42□□□□□ -1.06
PBRM1-207ENST00000409767 PLCH2O75038 1416 aa8.42□□□□□ -1.06
PBRM1-207ENST00000409767 NEO1Q92859 1461 aa8.42□□□□□ -1.06
PBRM1-207ENST00000409767 NUDCQ9Y266 331 aa8.42□□□□□ -1.06
PBRM1-207ENST00000409767 CNTLNQ9NXG0 1405 aa8.41□□□□□ -1.06
PBRM1-207ENST00000409767 MRS2Q9HD23 443 aa8.41□□□□□ -1.06
PBRM1-207ENST00000409767 ZNF644Q9H582 1327 aaPredicted RBP8.41□□□□□ -1.06
PBRM1-207ENST00000409767 TMF1P82094 1093 aa8.41□□□□□ -1.06
PBRM1-207ENST00000409767 NUTM2DQ5VT03 806 aaPredicted RBP8.41□□□□□ -1.06
PBRM1-207ENST00000409767 ZNF518AQ6AHZ1 1483 aa8.4□□□□□ -1.06
PBRM1-207ENST00000409767 PNNQ9H307 717 aaKnown RBP8.4□□□□□ -1.06
PBRM1-207ENST00000409767 PAK3O75914 559 aaPredicted RBP8.4□□□□□ -1.06
PBRM1-207ENST00000409767 SF3B2Q13435 895 aaKnown RBP8.4□□□□□ -1.06
PBRM1-207ENST00000409767 FAM9BQ8IZU0 186 aa8.4□□□□□ -1.07
PBRM1-207ENST00000409767 CLASP1Q7Z460 1538 aa8.4□□□□□ -1.07
PBRM1-207ENST00000409767 HNRNPUQ00839 825 aaKnown RBP eCLIP8.4□□□□□ -1.07
PBRM1-207ENST00000409767 CDK13Q14004 1512 aaKnown RBP8.39□□□□□ -1.07
PBRM1-207ENST00000409767 RAPGEF6Q8TEU7 1601 aa8.39□□□□□ -1.07
PBRM1-207ENST00000409767 DCAF11Q8TEB1 546 aa8.39□□□□□ -1.07
PBRM1-207ENST00000409767 NGDNQ8NEJ9 315 aaKnown RBP8.38□□□□□ -1.07
PBRM1-207ENST00000409767 ATP10AO60312 1499 aa8.38□□□□□ -1.07
PBRM1-207ENST00000409767 TNRQ92752 1358 aa8.37□□□□□ -1.07
PBRM1-207ENST00000409767 C9orf84Q5VXU9 1444 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms