RNA–Protein interactions for RNA: ENST00000399004.6

GIN1-201, Transcript of gypsy retrotransposon integrase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GIN1, Length 3,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIN1-201ENST00000399004 SYNJ2O15056 1496 aa12.76□□□□□ -0.37
GIN1-201ENST00000399004 TRIM52Q96A61 297 aa12.74□□□□□ -0.37
GIN1-201ENST00000399004 TSHZ2Q9NRE2 1034 aa12.73□□□□□ -0.37
GIN1-201ENST00000399004 CNGB1Q14028 1251 aaPredicted RBP12.72□□□□□ -0.37
GIN1-201ENST00000399004 SHANK2Q9UPX8 1470 aa12.72□□□□□ -0.37
GIN1-201ENST00000399004 CDK13Q14004 1512 aaKnown RBP12.72□□□□□ -0.37
GIN1-201ENST00000399004 ARHGEF5Q12774 1597 aa12.71□□□□□ -0.37
GIN1-201ENST00000399004 DDX10Q13206 875 aaKnown RBP12.71□□□□□ -0.37
GIN1-201ENST00000399004 IRX6P78412 446 aaPredicted RBP12.7□□□□□ -0.38
GIN1-201ENST00000399004 MBD5Q9P267 1494 aa12.7□□□□□ -0.38
GIN1-201ENST00000399004 MAST1Q9Y2H9 1570 aa12.69□□□□□ -0.38
GIN1-201ENST00000399004 ABCC10Q5T3U5 1492 aa12.68□□□□□ -0.38
GIN1-201ENST00000399004 KIF14Q15058 1648 aa12.67□□□□□ -0.38
GIN1-201ENST00000399004 DAPK1P53355 1430 aa12.67□□□□□ -0.38
GIN1-201ENST00000399004 MTUS2Q5JR59 1369 aa12.66□□□□□ -0.38
GIN1-201ENST00000399004 PREX2Q70Z35 1606 aa12.66□□□□□ -0.38
GIN1-201ENST00000399004 TEX14Q8IWB6 1497 aa12.66□□□□□ -0.38
GIN1-201ENST00000399004 ERCC6Q03468 1493 aa12.65□□□□□ -0.38
GIN1-201ENST00000399004 BCL11AQ9H165 835 aa12.64□□□□□ -0.39
GIN1-201ENST00000399004 NEFLP07196 543 aa12.64□□□□□ -0.39
GIN1-201ENST00000399004 ANP32EQ9BTT0 268 aa12.64□□□□□ -0.39
GIN1-201ENST00000399004 CDC42BPBQ9Y5S2 1711 aa12.64□□□□□ -0.39
GIN1-201ENST00000399004 ABCC5O15440 1437 aa12.63□□□□□ -0.39
GIN1-201ENST00000399004 TROQ12816 1431 aaPredicted RBP12.63□□□□□ -0.39
GIN1-201ENST00000399004 PPP1R15AO75807 674 aaPredicted RBP12.62□□□□□ -0.39
GIN1-201ENST00000399004 RPRD2Q5VT52 1461 aaKnown RBP12.62□□□□□ -0.39
GIN1-201ENST00000399004 CHD1O14646 1710 aa12.61□□□□□ -0.39
GIN1-201ENST00000399004 UNC13BO14795 1591 aa12.61□□□□□ -0.39
GIN1-201ENST00000399004 CAMSAP2Q08AD1 1489 aa12.61□□□□□ -0.39
GIN1-201ENST00000399004 LAMC1P11047 1609 aa12.61□□□□□ -0.39
GIN1-201ENST00000399004 FAM50AQ14320 339 aaKnown RBP12.6□□□□□ -0.39
GIN1-201ENST00000399004 E9PCH4 1651 aa12.6□□□□□ -0.39
GIN1-201ENST00000399004 GPATCH8Q9UKJ3 1502 aaKnown RBP12.6□□□□□ -0.39
GIN1-201ENST00000399004 PZPP20742 1482 aa12.6□□□□□ -0.39
GIN1-201ENST00000399004 SENP3-EIF4A1A0A087X0R7 540 aa12.6□□□□□ -0.39
GIN1-201ENST00000399004 PLXNC1O60486 1568 aa12.59□□□□□ -0.39
GIN1-201ENST00000399004 SIN3AQ96ST3 1273 aa12.59□□□□□ -0.39
GIN1-201ENST00000399004 PTPRGP23470 1445 aa12.59□□□□□ -0.39
GIN1-201ENST00000399004 P3H3Q8IVL6 736 aa12.58□□□□□ -0.39
GIN1-201ENST00000399004 ERICH6Q7L0X2 663 aa12.57□□□□□ -0.4
GIN1-201ENST00000399004 SPATA31E1Q6ZUB1 1445 aa12.57□□□□□ -0.4
GIN1-201ENST00000399004 ARHGEF12Q9NZN5 1544 aa12.56□□□□□ -0.4
GIN1-201ENST00000399004 ANKRD30BQ9BXX2 1392 aa12.55□□□□□ -0.4
GIN1-201ENST00000399004 KDM5CP41229 1560 aa12.54□□□□□ -0.4
GIN1-201ENST00000399004 MAGI2Q86UL8 1455 aa12.54□□□□□ -0.4
GIN1-201ENST00000399004 CLASP1Q7Z460 1538 aa12.54□□□□□ -0.4
GIN1-201ENST00000399004 RIMBP3CA6NJZ7 1639 aa12.54□□□□□ -0.4
GIN1-201ENST00000399004 RIMBP3BA6NNM3 1639 aa12.54□□□□□ -0.4
GIN1-201ENST00000399004 RIMBP3Q9UFD9 1639 aa12.54□□□□□ -0.4
GIN1-201ENST00000399004 SAMD9LQ8IVG5 1584 aa12.53□□□□□ -0.4
GIN1-201ENST00000399004 UHRF1BP1Q6BDS2 1440 aa12.53□□□□□ -0.4
GIN1-201ENST00000399004 CCER2I3L3R5 266 aa12.52□□□□□ -0.4
GIN1-201ENST00000399004 NCOA1Q15788 1441 aa12.52□□□□□ -0.41
GIN1-201ENST00000399004 IQGAP3Q86VI3 1631 aa12.52□□□□□ -0.41
GIN1-201ENST00000399004 ARAP3Q8WWN8 1544 aa12.51□□□□□ -0.41
GIN1-201ENST00000399004 MYO5CQ9NQX4 1742 aa12.51□□□□□ -0.41
GIN1-201ENST00000399004 NEURL4Q96JN8 1562 aa12.5□□□□□ -0.41
GIN1-201ENST00000399004 PLB1Q6P1J6 1458 aa12.5□□□□□ -0.41
GIN1-201ENST00000399004 RBM19Q9Y4C8 960 aaKnown RBP12.5□□□□□ -0.41
GIN1-201ENST00000399004 ATP10BO94823 1461 aa12.49□□□□□ -0.41
GIN1-201ENST00000399004 UHRF1BP1LA0JNW5 1464 aa12.48□□□□□ -0.41
GIN1-201ENST00000399004 CARMIL2Q6F5E8 1435 aa12.48□□□□□ -0.41
GIN1-201ENST00000399004 DEPDC5O75140 1603 aa12.48□□□□□ -0.41
GIN1-201ENST00000399004 BCORL1Q5H9F3 1711 aa12.47□□□□□ -0.41
GIN1-201ENST00000399004 RNF17Q9BXT8 1623 aaKnown RBP12.47□□□□□ -0.41
GIN1-201ENST00000399004 TRPM1Q7Z4N2 1603 aa12.46□□□□□ -0.41
GIN1-201ENST00000399004 PRG4Q92954 1404 aaPredicted RBP12.45□□□□□ -0.42
GIN1-201ENST00000399004 ATP10AO60312 1499 aa12.45□□□□□ -0.42
GIN1-201ENST00000399004 TTC37Q6PGP7 1564 aa12.44□□□□□ -0.42
GIN1-201ENST00000399004 ABCC2Q92887 1545 aa12.44□□□□□ -0.42
GIN1-201ENST00000399004 HNRNPUQ00839 825 aaKnown RBP eCLIP12.44□□□□□ -0.42
GIN1-201ENST00000399004 POLR3GLQ9BT43 218 aa12.43□□□□□ -0.42
GIN1-201ENST00000399004 RALGAPBQ86X10 1494 aa12.43□□□□□ -0.42
GIN1-201ENST00000399004 KIAA1107Q9UPP5 1409 aa12.43□□□□□ -0.42
GIN1-201ENST00000399004 ANP32CO43423 234 aa12.43□□□□□ -0.42
GIN1-201ENST00000399004 FOXD1Q16676 465 aa12.42□□□□□ -0.42
GIN1-201ENST00000399004 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.42□□□□□ -0.42
GIN1-201ENST00000399004 TONSLQ96HA7 1378 aa12.42□□□□□ -0.42
GIN1-201ENST00000399004 CNTLNQ9NXG0 1405 aa12.41□□□□□ -0.42
GIN1-201ENST00000399004 ZCCHC11Q5TAX3 1644 aaKnown RBP12.41□□□□□ -0.42
GIN1-201ENST00000399004 NBR1Q14596 966 aa12.4□□□□□ -0.42
GIN1-201ENST00000399004 ADRA2BP18089 450 aa12.39□□□□□ -0.43
GIN1-201ENST00000399004 ABCA9Q8IUA7 1624 aa12.39□□□□□ -0.43
GIN1-201ENST00000399004 VWDEQ8N2E2 1590 aa12.38□□□□□ -0.43
GIN1-201ENST00000399004 CEP152O94986 1710 aa12.38□□□□□ -0.43
GIN1-201ENST00000399004 EIF2AK4Q9P2K8 1649 aaKnown RBP12.38□□□□□ -0.43
GIN1-201ENST00000399004 KIAA1210Q9ULL0 1709 aa12.38□□□□□ -0.43
GIN1-201ENST00000399004 MPHOSPH9Q99550 1183 aa12.37□□□□□ -0.43
GIN1-201ENST00000399004 CCDC141Q6ZP82 1450 aa12.37□□□□□ -0.43
GIN1-201ENST00000399004 ARID3CA6NKF2 412 aa12.36□□□□□ -0.43
GIN1-201ENST00000399004 ABCC1P33527 1531 aa12.36□□□□□ -0.43
GIN1-201ENST00000399004 PPP6R1Q9UPN7 881 aa12.36□□□□□ -0.43
GIN1-201ENST00000399004 ZMYM4Q5VZL5 1548 aa12.36□□□□□ -0.43
GIN1-201ENST00000399004 IFT172Q9UG01 1749 aa12.35□□□□□ -0.43
GIN1-201ENST00000399004 ARID4BQ4LE39 1312 aaPredicted RBP12.35□□□□□ -0.43
GIN1-201ENST00000399004 C9orf84Q5VXU9 1444 aa12.35□□□□□ -0.43
GIN1-201ENST00000399004 INO80Q9ULG1 1556 aaPredicted RBP12.35□□□□□ -0.43
GIN1-201ENST00000399004 PLEKHH2Q8IVE3 1493 aa12.35□□□□□ -0.43
GIN1-201ENST00000399004 PRDM15P57071 1507 aaPredicted RBP12.35□□□□□ -0.43
GIN1-201ENST00000399004 FAM135AQ9P2D6 1515 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms