RNA–Protein interactions for RNA: ENST00000394830.7

PBRM1-204, Transcript of polybromo 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PBRM1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-204ENST00000394830 PRKRIP1Q9H875 184 aaPredicted RBP18.63■□□□□ 0.57
PBRM1-204ENST00000394830 SUPT6HQ7KZ85 1726 aaKnown RBP18.62■□□□□ 0.57
PBRM1-204ENST00000394830 URB2Q14146 1524 aaKnown RBP18.59■□□□□ 0.57
PBRM1-204ENST00000394830 ZNF644Q9H582 1327 aaPredicted RBP18.59■□□□□ 0.57
PBRM1-204ENST00000394830 HECW1Q76N89 1606 aa18.58■□□□□ 0.57
PBRM1-204ENST00000394830 WASHC2AQ641Q2 1341 aa18.58■□□□□ 0.57
PBRM1-204ENST00000394830 B4GALNT3Q6L9W6 998 aa18.58■□□□□ 0.56
PBRM1-204ENST00000394830 CCDC7Q96M83 1385 aa18.56■□□□□ 0.56
PBRM1-204ENST00000394830 WDR43Q15061 677 aaKnown RBP eCLIP18.56■□□□□ 0.56
PBRM1-204ENST00000394830 MRC2Q9UBG0 1479 aa18.55■□□□□ 0.56
PBRM1-204ENST00000394830 CNTLNQ9NXG0 1405 aa18.55■□□□□ 0.56
PBRM1-204ENST00000394830 ROCK2O75116 1388 aaKnown RBP18.55■□□□□ 0.56
PBRM1-204ENST00000394830 RSPH4AQ5TD94 716 aa18.55■□□□□ 0.56
PBRM1-204ENST00000394830 EPRSP07814 1512 aaKnown RBP18.54■□□□□ 0.56
PBRM1-204ENST00000394830 SENP3-EIF4A1A0A087X0R7 540 aa18.53■□□□□ 0.56
PBRM1-204ENST00000394830 NPM2Q86SE8 214 aaKnown RBP18.53■□□□□ 0.56
PBRM1-204ENST00000394830 CDCA8Q53HL2 280 aa18.52■□□□□ 0.56
PBRM1-204ENST00000394830 CFAP43Q8NDM7 1665 aa18.52■□□□□ 0.55
PBRM1-204ENST00000394830 IFT140Q96RY7 1462 aa18.51■□□□□ 0.55
PBRM1-204ENST00000394830 ZBED9Q6R2W3 1325 aa18.51■□□□□ 0.55
PBRM1-204ENST00000394830 HNRNPMP52272 730 aaKnown RBP eCLIP18.51■□□□□ 0.55
PBRM1-204ENST00000394830 RALBP1Q15311 655 aa18.51■□□□□ 0.55
PBRM1-204ENST00000394830 PTPN23Q9H3S7 1636 aa18.5■□□□□ 0.55
PBRM1-204ENST00000394830 USP47Q96K76 1375 aa18.5■□□□□ 0.55
PBRM1-204ENST00000394830 IQGAP2Q13576 1575 aa18.5■□□□□ 0.55
PBRM1-204ENST00000394830 PRDM2Q13029 1718 aa18.5■□□□□ 0.55
PBRM1-204ENST00000394830 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.5■□□□□ 0.55
PBRM1-204ENST00000394830 CANXP27824 592 aaKnown RBP18.5■□□□□ 0.55
PBRM1-204ENST00000394830 ZBTB47Q9UFB7 747 aaPredicted RBP18.5■□□□□ 0.55
PBRM1-204ENST00000394830 KIF7Q2M1P5 1343 aa18.49■□□□□ 0.55
PBRM1-204ENST00000394830 CHGAP10645 457 aaKnown RBP18.48■□□□□ 0.55
PBRM1-204ENST00000394830 THOC2Q8NI27 1593 aaKnown RBP18.48■□□□□ 0.55
PBRM1-204ENST00000394830 KNSTRNQ9Y448 316 aa18.48■□□□□ 0.55
PBRM1-204ENST00000394830 TMF1P82094 1093 aa18.48■□□□□ 0.55
PBRM1-204ENST00000394830 NUDCQ9Y266 331 aa18.47■□□□□ 0.55
PBRM1-204ENST00000394830 ROCK1Q13464 1354 aa18.47■□□□□ 0.55
PBRM1-204ENST00000394830 CDK13Q14004 1512 aaKnown RBP18.46■□□□□ 0.55
PBRM1-204ENST00000394830 DAPK1P53355 1430 aa18.46■□□□□ 0.55
PBRM1-204ENST00000394830 KIAA0586Q9BVV6 1533 aa18.46■□□□□ 0.55
PBRM1-204ENST00000394830 PTPRKQ15262 1439 aa18.46■□□□□ 0.55
PBRM1-204ENST00000394830 NPM1P06748 294 aaKnown RBP eCLIP18.45■□□□□ 0.54
PBRM1-204ENST00000394830 KTN1Q86UP2 1357 aaKnown RBP18.45■□□□□ 0.54
PBRM1-204ENST00000394830 TROQ12816 1431 aaPredicted RBP18.45■□□□□ 0.54
PBRM1-204ENST00000394830 SNAPC4Q5SXM2 1469 aa18.44■□□□□ 0.54
PBRM1-204ENST00000394830 ANKRD50Q9ULJ7 1429 aa18.44■□□□□ 0.54
PBRM1-204ENST00000394830 ARID4BQ4LE39 1312 aaPredicted RBP18.44■□□□□ 0.54
PBRM1-204ENST00000394830 CTTNBP2Q8WZ74 1663 aa18.43■□□□□ 0.54
PBRM1-204ENST00000394830 NBPF8Q3BBV2 869 aa18.43■□□□□ 0.54
PBRM1-204ENST00000394830 AKNAQ7Z591 1439 aa18.43■□□□□ 0.54
PBRM1-204ENST00000394830 ST20-MTHFSA0A0A6YYL1 179 aa18.43■□□□□ 0.54
PBRM1-204ENST00000394830 KIF15Q9NS87 1388 aa18.42■□□□□ 0.54
PBRM1-204ENST00000394830 CC2D1BQ5T0F9 858 aaKnown RBP18.42■□□□□ 0.54
PBRM1-204ENST00000394830 PTPRGP23470 1445 aa18.42■□□□□ 0.54
PBRM1-204ENST00000394830 EFCAB2Q5VUJ9 269 aa18.4■□□□□ 0.54
PBRM1-204ENST00000394830 NLRP13Q86W25 1043 aa18.39■□□□□ 0.53
PBRM1-204ENST00000394830 PRG4Q92954 1404 aaPredicted RBP18.39■□□□□ 0.53
PBRM1-204ENST00000394830 UGGT2Q9NYU1 1516 aa18.39■□□□□ 0.53
PBRM1-204ENST00000394830 ANKRD30BQ9BXX2 1392 aa18.38■□□□□ 0.53
PBRM1-204ENST00000394830 CCDC144AA2RUR9 1427 aa18.38■□□□□ 0.53
PBRM1-204ENST00000394830 KIAA1107Q9UPP5 1409 aa18.38■□□□□ 0.53
PBRM1-204ENST00000394830 MYBBP1AQ9BQG0 1328 aaKnown RBP18.37■□□□□ 0.53
PBRM1-204ENST00000394830 SLC24A1O60721 1099 aa18.37■□□□□ 0.53
PBRM1-204ENST00000394830 NBR1Q14596 966 aa18.37■□□□□ 0.53
PBRM1-204ENST00000394830 ABCC5O15440 1437 aa18.35■□□□□ 0.53
PBRM1-204ENST00000394830 RCAN3Q9UKA8 241 aa18.33■□□□□ 0.53
PBRM1-204ENST00000394830 NOP58Q9Y2X3 529 aaKnown RBP18.33■□□□□ 0.53
PBRM1-204ENST00000394830 PDE3BQ13370 1112 aa18.33■□□□□ 0.52
PBRM1-204ENST00000394830 KANK1Q14678 1352 aa18.32■□□□□ 0.52
PBRM1-204ENST00000394830 TCOF1Q13428 1488 aaKnown RBP18.31■□□□□ 0.52
PBRM1-204ENST00000394830 RPRD2Q5VT52 1461 aaKnown RBP18.29■□□□□ 0.52
PBRM1-204ENST00000394830 NEFMP07197 916 aa18.29■□□□□ 0.52
PBRM1-204ENST00000394830 CCDC184Q52MB2 194 aa18.28■□□□□ 0.52
PBRM1-204ENST00000394830 C9orf84Q5VXU9 1444 aa18.28■□□□□ 0.52
PBRM1-204ENST00000394830 GRIN2AQ12879 1464 aa18.28■□□□□ 0.52
PBRM1-204ENST00000394830 FANCIQ9NVI1 1328 aa18.28■□□□□ 0.52
PBRM1-204ENST00000394830 NCOA1Q15788 1441 aa18.27■□□□□ 0.52
PBRM1-204ENST00000394830 C11orf95C9JLR9 678 aaPredicted RBP18.27■□□□□ 0.52
PBRM1-204ENST00000394830 SYNJ2O15056 1496 aa18.26■□□□□ 0.51
PBRM1-204ENST00000394830 DDRGK1Q96HY6 314 aa18.25■□□□□ 0.51
PBRM1-204ENST00000394830 SAMD9Q5K651 1589 aa18.25■□□□□ 0.51
PBRM1-204ENST00000394830 CAMSAP2Q08AD1 1489 aa18.25■□□□□ 0.51
PBRM1-204ENST00000394830 SPAG9O60271 1321 aaKnown RBP18.24■□□□□ 0.51
PBRM1-204ENST00000394830 ZNF608Q9ULD9 1512 aaPredicted RBP18.24■□□□□ 0.51
PBRM1-204ENST00000394830 ABCA5Q8WWZ7 1642 aa18.24■□□□□ 0.51
PBRM1-204ENST00000394830 PLB1Q6P1J6 1458 aa18.22■□□□□ 0.51
PBRM1-204ENST00000394830 TCERG1O14776 1098 aaKnown RBP18.21■□□□□ 0.51
PBRM1-204ENST00000394830 MAGI1Q96QZ7 1491 aaPredicted RBP18.21■□□□□ 0.51
PBRM1-204ENST00000394830 BRD4O60885 1362 aaPredicted RBP18.21■□□□□ 0.51
PBRM1-204ENST00000394830 PANK3Q9H999 370 aa18.21■□□□□ 0.51
PBRM1-204ENST00000394830 CFAP53Q96M91 514 aa18.2■□□□□ 0.5
PBRM1-204ENST00000394830 UPF2Q9HAU5 1272 aaKnown RBP18.19■□□□□ 0.5
PBRM1-204ENST00000394830 ADAMTS12P58397 1594 aa18.18■□□□□ 0.5
PBRM1-204ENST00000394830 WDR62O43379 1518 aa18.18■□□□□ 0.5
PBRM1-204ENST00000394830 STAG3Q9UJ98 1225 aa18.18■□□□□ 0.5
PBRM1-204ENST00000394830 EIF3AQ14152 1382 aaKnown RBP18.17■□□□□ 0.5
PBRM1-204ENST00000394830 RRP1P56182 461 aaKnown RBP18.17■□□□□ 0.5
PBRM1-204ENST00000394830 NUP153P49790 1475 aaKnown RBP18.17■□□□□ 0.5
PBRM1-204ENST00000394830 PNISRQ8TF01 805 aaKnown RBP18.16■□□□□ 0.5
PBRM1-204ENST00000394830 KIF21AQ7Z4S6 1674 aa18.16■□□□□ 0.5
PBRM1-204ENST00000394830 KIF3BO15066 747 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms