RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 DNAJC5Q9H3Z4 198 aa15.74■□□□□ 0.11
UBE2D3-209ENST00000394804 CYB5RLQ6IPT4 315 aa15.74■□□□□ 0.11
UBE2D3-209ENST00000394804 ERICH6BQ5W0A0 696 aa15.73■□□□□ 0.11
UBE2D3-209ENST00000394804 L3MBTL2Q969R5 705 aa15.73■□□□□ 0.11
UBE2D3-209ENST00000394804 KDM2AQ9Y2K7 1162 aa15.73■□□□□ 0.11
UBE2D3-209ENST00000394804 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.73■□□□□ 0.111e-10■■■□□ 14.9
UBE2D3-209ENST00000394804 KIAA0586Q9BVV6 1533 aa15.72■□□□□ 0.11
UBE2D3-209ENST00000394804 PRG4Q92954 1404 aaPredicted RBP15.72■□□□□ 0.11
UBE2D3-209ENST00000394804 PCF11O94913 1555 aaKnown RBP15.71■□□□□ 0.11
UBE2D3-209ENST00000394804 NCOA2Q15596 1464 aa15.7■□□□□ 0.1
UBE2D3-209ENST00000394804 PLEKHD1A6NEE1 506 aa15.68■□□□□ 0.1
UBE2D3-209ENST00000394804 B4GALNT3Q6L9W6 998 aa15.68■□□□□ 0.1
UBE2D3-209ENST00000394804 HFM1A2PYH4 1435 aa15.67■□□□□ 0.1
UBE2D3-209ENST00000394804 IQGAP2Q13576 1575 aa15.67■□□□□ 0.1
UBE2D3-209ENST00000394804 SALL2Q9Y467 1007 aaPredicted RBP15.67■□□□□ 0.1
UBE2D3-209ENST00000394804 MAPKBP1O60336 1514 aa15.67■□□□□ 0.1
UBE2D3-209ENST00000394804 CARD11Q9BXL7 1154 aa15.67■□□□□ 0.1
UBE2D3-209ENST00000394804 CLASP1Q7Z460 1538 aa15.64■□□□□ 0.09
UBE2D3-209ENST00000394804 NPM2Q86SE8 214 aaKnown RBP15.64■□□□□ 0.09
UBE2D3-209ENST00000394804 CARMIL2Q6F5E8 1435 aa15.64■□□□□ 0.09
UBE2D3-209ENST00000394804 ERCC6L2Q5T890 1561 aa15.63■□□□□ 0.09
UBE2D3-209ENST00000394804 PRKRIP1Q9H875 184 aaPredicted RBP15.62■□□□□ 0.09
UBE2D3-209ENST00000394804 ZBTB47Q9UFB7 747 aaPredicted RBP15.61■□□□□ 0.09
UBE2D3-209ENST00000394804 ARHGEF11O15085 1522 aa15.61■□□□□ 0.09
UBE2D3-209ENST00000394804 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.61■□□□□ 0.09
UBE2D3-209ENST00000394804 PKD2Q13563 968 aa15.6■□□□□ 0.09
UBE2D3-209ENST00000394804 CTTNBP2Q8WZ74 1663 aa15.6■□□□□ 0.09
UBE2D3-209ENST00000394804 SENP3-EIF4A1A0A087X0R7 540 aa15.6■□□□□ 0.09
UBE2D3-209ENST00000394804 EHBP1L1Q8N3D4 1523 aa15.6■□□□□ 0.09
UBE2D3-209ENST00000394804 WASHC2AQ641Q2 1341 aa15.59■□□□□ 0.09
UBE2D3-209ENST00000394804 NBR1Q14596 966 aa15.59■□□□□ 0.09
UBE2D3-209ENST00000394804 NAIPQ13075 1403 aa15.58■□□□□ 0.09
UBE2D3-209ENST00000394804 PTPRGP23470 1445 aa15.58■□□□□ 0.08
UBE2D3-209ENST00000394804 CNTLNQ9NXG0 1405 aa15.57■□□□□ 0.08
UBE2D3-209ENST00000394804 ZBED9Q6R2W3 1325 aa15.56■□□□□ 0.08
UBE2D3-209ENST00000394804 CCDC7Q96M83 1385 aa15.56■□□□□ 0.08
UBE2D3-209ENST00000394804 ANKRD30AQ9BXX3 1397 aa15.55■□□□□ 0.08
UBE2D3-209ENST00000394804 SUPT6HQ7KZ85 1726 aaKnown RBP15.55■□□□□ 0.08
UBE2D3-209ENST00000394804 RGL3Q3MIN7 710 aa15.54■□□□□ 0.08
UBE2D3-209ENST00000394804 DISP1Q96F81 1524 aa15.54■□□□□ 0.08
UBE2D3-209ENST00000394804 RIMBP3CA6NJZ7 1639 aa15.54■□□□□ 0.08
UBE2D3-209ENST00000394804 RIMBP3BA6NNM3 1639 aa15.54■□□□□ 0.08
UBE2D3-209ENST00000394804 RIMBP3Q9UFD9 1639 aa15.54■□□□□ 0.08
UBE2D3-209ENST00000394804 DCAF11Q8TEB1 546 aa15.53■□□□□ 0.08
UBE2D3-209ENST00000394804 UGGT2Q9NYU1 1516 aa15.52■□□□□ 0.08
UBE2D3-209ENST00000394804 NOP58Q9Y2X3 529 aaKnown RBP15.52■□□□□ 0.08
UBE2D3-209ENST00000394804 NUDCQ9Y266 331 aa15.51■□□□□ 0.07
UBE2D3-209ENST00000394804 NPM1P06748 294 aaKnown RBP eCLIP15.51■□□□□ 0.07
UBE2D3-209ENST00000394804 CFAP43Q8NDM7 1665 aa15.51■□□□□ 0.07
UBE2D3-209ENST00000394804 NUP155O75694 1391 aa15.51■□□□□ 0.07
UBE2D3-209ENST00000394804 MIA2Q96PC5 1412 aa15.5■□□□□ 0.07
UBE2D3-209ENST00000394804 WDR43Q15061 677 aaKnown RBP eCLIP15.5■□□□□ 0.07
UBE2D3-209ENST00000394804 KIAA0556O60303 1618 aa15.49■□□□□ 0.07
UBE2D3-209ENST00000394804 SHROOM2Q13796 1616 aa15.49■□□□□ 0.07
UBE2D3-209ENST00000394804 FANCIQ9NVI1 1328 aa15.49■□□□□ 0.07
UBE2D3-209ENST00000394804 ROCK2O75116 1388 aaKnown RBP15.48■□□□□ 0.07
UBE2D3-209ENST00000394804 KIF7Q2M1P5 1343 aa15.48■□□□□ 0.07
UBE2D3-209ENST00000394804 PTPN23Q9H3S7 1636 aa15.48■□□□□ 0.07
UBE2D3-209ENST00000394804 PLB1Q6P1J6 1458 aa15.47■□□□□ 0.07
UBE2D3-209ENST00000394804 CANXP27824 592 aaKnown RBP15.47■□□□□ 0.07
UBE2D3-209ENST00000394804 USP47Q96K76 1375 aa15.47■□□□□ 0.07
UBE2D3-209ENST00000394804 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.46■□□□□ 0.07
UBE2D3-209ENST00000394804 ZNF644Q9H582 1327 aaPredicted RBP15.46■□□□□ 0.07
UBE2D3-209ENST00000394804 HECW1Q76N89 1606 aa15.46■□□□□ 0.07
UBE2D3-209ENST00000394804 BCL11AQ9H165 835 aa15.46■□□□□ 0.07
UBE2D3-209ENST00000394804 RALBP1Q15311 655 aa15.45■□□□□ 0.06
UBE2D3-209ENST00000394804 PTPRKQ15262 1439 aa15.43■□□□□ 0.06
UBE2D3-209ENST00000394804 KTN1Q86UP2 1357 aaKnown RBP15.42■□□□□ 0.06
UBE2D3-209ENST00000394804 NBPF8Q3BBV2 869 aa15.42■□□□□ 0.06
UBE2D3-209ENST00000394804 EPRSP07814 1512 aaKnown RBP15.41■□□□□ 0.06
UBE2D3-209ENST00000394804 TRHP20396 242 aaPredicted RBP15.41■□□□□ 0.06
UBE2D3-209ENST00000394804 SAMD9Q5K651 1589 aa15.41■□□□□ 0.06
UBE2D3-209ENST00000394804 KIF15Q9NS87 1388 aa15.41■□□□□ 0.06
UBE2D3-209ENST00000394804 CC2D1BQ5T0F9 858 aaKnown RBP15.4■□□□□ 0.06
UBE2D3-209ENST00000394804 KNSTRNQ9Y448 316 aa15.39■□□□□ 0.05
UBE2D3-209ENST00000394804 CCDC184Q52MB2 194 aa15.39■□□□□ 0.05
UBE2D3-209ENST00000394804 RCAN3Q9UKA8 241 aa15.39■□□□□ 0.05
UBE2D3-209ENST00000394804 ST20-MTHFSA0A0A6YYL1 179 aa15.38■□□□□ 0.05
UBE2D3-209ENST00000394804 TMF1P82094 1093 aa15.38■□□□□ 0.05
UBE2D3-209ENST00000394804 CDCA8Q53HL2 280 aa15.38■□□□□ 0.05
UBE2D3-209ENST00000394804 CDK13Q14004 1512 aaKnown RBP15.38■□□□□ 0.05
UBE2D3-209ENST00000394804 ARID4BQ4LE39 1312 aaPredicted RBP15.38■□□□□ 0.05
UBE2D3-209ENST00000394804 DAPK1P53355 1430 aa15.38■□□□□ 0.05
UBE2D3-209ENST00000394804 NLRP13Q86W25 1043 aa15.37■□□□□ 0.05
UBE2D3-209ENST00000394804 MYBBP1AQ9BQG0 1328 aaKnown RBP15.37■□□□□ 0.05
UBE2D3-209ENST00000394804 DDRGK1Q96HY6 314 aa15.37■□□□□ 0.05
UBE2D3-209ENST00000394804 ROCK1Q13464 1354 aa15.36■□□□□ 0.05
UBE2D3-209ENST00000394804 AKNAQ7Z591 1439 aa15.35■□□□□ 0.05
UBE2D3-209ENST00000394804 HNRNPMP52272 730 aaKnown RBP eCLIP15.35■□□□□ 0.054e-13■■■■■ 32.7
UBE2D3-209ENST00000394804 DEKP35659 375 aaKnown RBP15.35■□□□□ 0.05
UBE2D3-209ENST00000394804 ANKRD30BQ9BXX2 1392 aa15.34■□□□□ 0.05
UBE2D3-209ENST00000394804 ANKRD50Q9ULJ7 1429 aa15.33■□□□□ 0.05
UBE2D3-209ENST00000394804 PDE3BQ13370 1112 aa15.33■□□□□ 0.05
UBE2D3-209ENST00000394804 C11orf95C9JLR9 678 aaPredicted RBP15.32■□□□□ 0.04
UBE2D3-209ENST00000394804 TCERG1O14776 1098 aaKnown RBP15.32■□□□□ 0.04
UBE2D3-209ENST00000394804 NCOA1Q15788 1441 aa15.32■□□□□ 0.04
UBE2D3-209ENST00000394804 RSPH4AQ5TD94 716 aa15.32■□□□□ 0.04
UBE2D3-209ENST00000394804 CHGAP10645 457 aaKnown RBP15.32■□□□□ 0.04
UBE2D3-209ENST00000394804 KIAA1107Q9UPP5 1409 aa15.31■□□□□ 0.04
UBE2D3-209ENST00000394804 IPO9Q96P70 1041 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms