RNA–Protein interactions for RNA: ENST00000393811.6

R3HDM2-203, Transcript of R3H domain containing 2, humanhuman

TSL 1 (best)

Gene R3HDM2, Length 3,778 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-203ENST00000393811 EFCAB5A4FU69 1503 aa15.7■□□□□ 0.1
R3HDM2-203ENST00000393811 CFDP1Q9UEE9 299 aaPredicted RBP15.69■□□□□ 0.1
R3HDM2-203ENST00000393811 PKD2Q13563 968 aa15.68■□□□□ 0.1
R3HDM2-203ENST00000393811 CFAP43Q8NDM7 1665 aa15.67■□□□□ 0.1
R3HDM2-203ENST00000393811 EXOC6Q8TAG9 804 aa15.67■□□□□ 0.1
R3HDM2-203ENST00000393811 ZNF644Q9H582 1327 aaPredicted RBP15.67■□□□□ 0.1
R3HDM2-203ENST00000393811 RCAN3Q9UKA8 241 aa15.66■□□□□ 0.1
R3HDM2-203ENST00000393811 FBLN2P98095 1184 aa15.65■□□□□ 0.1
R3HDM2-203ENST00000393811 USP47Q96K76 1375 aa15.64■□□□□ 0.09
R3HDM2-203ENST00000393811 NCOA1Q15788 1441 aa15.64■□□□□ 0.09
R3HDM2-203ENST00000393811 POLA1P09884 1462 aaPredicted RBP15.63■□□□□ 0.09
R3HDM2-203ENST00000393811 RGL3Q3MIN7 710 aa15.63■□□□□ 0.09
R3HDM2-203ENST00000393811 TCERG1O14776 1098 aaKnown RBP15.62■□□□□ 0.09
R3HDM2-203ENST00000393811 DCAF11Q8TEB1 546 aa15.62■□□□□ 0.09
R3HDM2-203ENST00000393811 PDE4AP27815 886 aa15.62■□□□□ 0.09
R3HDM2-203ENST00000393811 SMG6Q86US8 1419 aaKnown RBP15.61■□□□□ 0.09
R3HDM2-203ENST00000393811 PPM1GO15355 546 aaPredicted RBP15.61■□□□□ 0.09
R3HDM2-203ENST00000393811 RRP1P56182 461 aaKnown RBP15.61■□□□□ 0.09
R3HDM2-203ENST00000393811 CC2D1BQ5T0F9 858 aaKnown RBP15.61■□□□□ 0.09
R3HDM2-203ENST00000393811 EIF5BO60841 1220 aaKnown RBP15.6■□□□□ 0.09
R3HDM2-203ENST00000393811 ST20-MTHFSA0A0A6YYL1 179 aa15.6■□□□□ 0.09
R3HDM2-203ENST00000393811 PLIN1O60240 522 aa15.59■□□□□ 0.09
R3HDM2-203ENST00000393811 SUPT6HQ7KZ85 1726 aaKnown RBP15.59■□□□□ 0.09
R3HDM2-203ENST00000393811 PNISRQ8TF01 805 aaKnown RBP15.58■□□□□ 0.09
R3HDM2-203ENST00000393811 EHBP1L1Q8N3D4 1523 aa15.58■□□□□ 0.08
R3HDM2-203ENST00000393811 TSPY4P0CV99 314 aa15.58■□□□□ 0.08
R3HDM2-203ENST00000393811 TSPY10P0CW01 314 aa15.58■□□□□ 0.08
R3HDM2-203ENST00000393811 TOPBP1Q92547 1522 aa15.58■□□□□ 0.08
R3HDM2-203ENST00000393811 IL27Q8NEV9 243 aa15.57■□□□□ 0.08
R3HDM2-203ENST00000393811 DDRGK1Q96HY6 314 aa15.57■□□□□ 0.08
R3HDM2-203ENST00000393811 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.57■□□□□ 0.081e-6■□□□□ 8.8
R3HDM2-203ENST00000393811 ABCA10Q8WWZ4 1543 aa15.56■□□□□ 0.08
R3HDM2-203ENST00000393811 GAPVD1Q14C86 1478 aa15.56■□□□□ 0.08
R3HDM2-203ENST00000393811 NESP48681 1621 aa15.56■□□□□ 0.08
R3HDM2-203ENST00000393811 ANKRD30BQ9BXX2 1392 aa15.56■□□□□ 0.08
R3HDM2-203ENST00000393811 ANO8Q9HCE9 1232 aaPredicted RBP15.55■□□□□ 0.08
R3HDM2-203ENST00000393811 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.55■□□□□ 0.08
R3HDM2-203ENST00000393811 RALBP1Q15311 655 aa15.55■□□□□ 0.08
R3HDM2-203ENST00000393811 SNAPC4Q5SXM2 1469 aa15.54■□□□□ 0.08
R3HDM2-203ENST00000393811 MYBBP1AQ9BQG0 1328 aaKnown RBP15.54■□□□□ 0.08
R3HDM2-203ENST00000393811 SLC4A3P48751 1232 aa15.54■□□□□ 0.08
R3HDM2-203ENST00000393811 KIF15Q9NS87 1388 aa15.54■□□□□ 0.08
R3HDM2-203ENST00000393811 RGS3P49796 1198 aa15.53■□□□□ 0.08
R3HDM2-203ENST00000393811 NUP155O75694 1391 aa15.52■□□□□ 0.08
R3HDM2-203ENST00000393811 CDCA7LQ96GN5 454 aa15.52■□□□□ 0.07
R3HDM2-203ENST00000393811 NLRP13Q86W25 1043 aa15.51■□□□□ 0.07
R3HDM2-203ENST00000393811 WDR43Q15061 677 aaKnown RBP eCLIP15.51■□□□□ 0.07
R3HDM2-203ENST00000393811 ROCK2O75116 1388 aaKnown RBP15.51■□□□□ 0.07
R3HDM2-203ENST00000393811 DNMBPQ6XZF7 1577 aa15.51■□□□□ 0.07
R3HDM2-203ENST00000393811 KTN1Q86UP2 1357 aaKnown RBP15.5■□□□□ 0.07
R3HDM2-203ENST00000393811 SKAP1Q86WV1 359 aa15.5■□□□□ 0.07
R3HDM2-203ENST00000393811 CDK13Q14004 1512 aaKnown RBP15.5■□□□□ 0.07
R3HDM2-203ENST00000393811 RPRD2Q5VT52 1461 aaKnown RBP15.5■□□□□ 0.07
R3HDM2-203ENST00000393811 CRBNQ96SW2 442 aa15.49■□□□□ 0.07
R3HDM2-203ENST00000393811 GRIN2BQ13224 1484 aa15.49■□□□□ 0.07
R3HDM2-203ENST00000393811 CANXP27824 592 aaKnown RBP15.48■□□□□ 0.07
R3HDM2-203ENST00000393811 MIA2Q96PC5 1412 aa15.48■□□□□ 0.07
R3HDM2-203ENST00000393811 CUL7Q14999 1698 aa15.47■□□□□ 0.07
R3HDM2-203ENST00000393811 UGGT2Q9NYU1 1516 aa15.47■□□□□ 0.07
R3HDM2-203ENST00000393811 BACH2Q9BYV9 841 aa15.47■□□□□ 0.07
R3HDM2-203ENST00000393811 USP35Q9P2H5 1018 aa15.47■□□□□ 0.07
R3HDM2-203ENST00000393811 DAPK1P53355 1430 aa15.46■□□□□ 0.07
R3HDM2-203ENST00000393811 PLEKHD1A6NEE1 506 aa15.46■□□□□ 0.07
R3HDM2-203ENST00000393811 PDE3BQ13370 1112 aa15.46■□□□□ 0.07
R3HDM2-203ENST00000393811 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.46■□□□□ 0.07
R3HDM2-203ENST00000393811 EPRSP07814 1512 aaKnown RBP15.45■□□□□ 0.06
R3HDM2-203ENST00000393811 ANKRD30AQ9BXX3 1397 aa15.45■□□□□ 0.06
R3HDM2-203ENST00000393811 ARXQ96QS3 562 aa15.45■□□□□ 0.06
R3HDM2-203ENST00000393811 MS4A1P11836 297 aa15.45■□□□□ 0.06
R3HDM2-203ENST00000393811 KDM5BQ9UGL1 1544 aa15.43■□□□□ 0.06
R3HDM2-203ENST00000393811 ARID4BQ4LE39 1312 aaPredicted RBP15.43■□□□□ 0.06
R3HDM2-203ENST00000393811 BRD4O60885 1362 aaPredicted RBP15.43■□□□□ 0.06
R3HDM2-203ENST00000393811 CHMP7Q8WUX9 453 aaPredicted RBP15.43■□□□□ 0.06
R3HDM2-203ENST00000393811 CTTNBP2Q8WZ74 1663 aa15.43■□□□□ 0.06
R3HDM2-203ENST00000393811 DHX29Q7Z478 1369 aaKnown RBP15.42■□□□□ 0.06
R3HDM2-203ENST00000393811 ABCC5O15440 1437 aa15.42■□□□□ 0.06
R3HDM2-203ENST00000393811 KDM6BO15054 1643 aa15.42■□□□□ 0.06
R3HDM2-203ENST00000393811 PDS5BQ9NTI5 1447 aa15.4■□□□□ 0.06
R3HDM2-203ENST00000393811 KNSTRNQ9Y448 316 aa15.4■□□□□ 0.06
R3HDM2-203ENST00000393811 GSE1Q14687 1217 aa15.4■□□□□ 0.06
R3HDM2-203ENST00000393811 RNF123Q5XPI4 1314 aa15.4■□□□□ 0.06
R3HDM2-203ENST00000393811 KIAA1107Q9UPP5 1409 aa15.39■□□□□ 0.05
R3HDM2-203ENST00000393811 HECW1Q76N89 1606 aa15.39■□□□□ 0.05
R3HDM2-203ENST00000393811 PANK3Q9H999 370 aa15.39■□□□□ 0.05
R3HDM2-203ENST00000393811 BRPF3Q9ULD4 1205 aa15.39■□□□□ 0.05
R3HDM2-203ENST00000393811 ROCK1Q13464 1354 aa15.39■□□□□ 0.05
R3HDM2-203ENST00000393811 MAGI3Q5TCQ9 1506 aa15.38■□□□□ 0.05
R3HDM2-203ENST00000393811 HNRNPMP52272 730 aaKnown RBP eCLIP15.38■□□□□ 0.05
R3HDM2-203ENST00000393811 PRKCSHP14314 528 aaPredicted RBP15.38■□□□□ 0.05
R3HDM2-203ENST00000393811 NFKBIBQ15653 356 aa15.38■□□□□ 0.05
R3HDM2-203ENST00000393811 DENND4BO75064 1496 aaPredicted RBP15.37■□□□□ 0.05
R3HDM2-203ENST00000393811 TCOF1Q13428 1488 aaKnown RBP15.37■□□□□ 0.05
R3HDM2-203ENST00000393811 SPATA31E1Q6ZUB1 1445 aa15.37■□□□□ 0.05
R3HDM2-203ENST00000393811 TMF1P82094 1093 aa15.37■□□□□ 0.05
R3HDM2-203ENST00000393811 PRDM2Q13029 1718 aa15.37■□□□□ 0.05
R3HDM2-203ENST00000393811 TEX14Q8IWB6 1497 aa15.36■□□□□ 0.05
R3HDM2-203ENST00000393811 ANKRD50Q9ULJ7 1429 aa15.36■□□□□ 0.05
R3HDM2-203ENST00000393811 THOC2Q8NI27 1593 aaKnown RBP15.35■□□□□ 0.05
R3HDM2-203ENST00000393811 ERCC6Q03468 1493 aa15.35■□□□□ 0.05
R3HDM2-203ENST00000393811 NBPF1Q3BBV0 1214 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 881.8 ms