RNA–Protein interactions for RNA: ENST00000393758.6

PDZD4-202, Transcript of PDZ domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDZD4, Length 3,763 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-202ENST00000393758 IPO9Q96P70 1041 aaKnown RBP21.45■■□□□ 1.02
PDZD4-202ENST00000393758 DCAF11Q8TEB1 546 aa21.43■■□□□ 1.02
PDZD4-202ENST00000393758 HMGXB3Q12766 1538 aa21.42■■□□□ 1.02
PDZD4-202ENST00000393758 CC2D1BQ5T0F9 858 aaKnown RBP21.41■■□□□ 1.02
PDZD4-202ENST00000393758 EXOC6Q8TAG9 804 aa21.39■■□□□ 1.02
PDZD4-202ENST00000393758 TSPY4P0CV99 314 aa21.37■■□□□ 1.01
PDZD4-202ENST00000393758 TSPY10P0CW01 314 aa21.37■■□□□ 1.01
PDZD4-202ENST00000393758 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.37■■□□□ 1.01
PDZD4-202ENST00000393758 NESP48681 1621 aa21.36■■□□□ 1.01
PDZD4-202ENST00000393758 RCAN3Q9UKA8 241 aa21.36■■□□□ 1.01
PDZD4-202ENST00000393758 PLIN1O60240 522 aa21.35■■□□□ 1.01
PDZD4-202ENST00000393758 ST20-MTHFSA0A0A6YYL1 179 aa21.35■■□□□ 1.01
PDZD4-202ENST00000393758 USP47Q96K76 1375 aa21.34■■□□□ 1.01
PDZD4-202ENST00000393758 POLA1P09884 1462 aaPredicted RBP21.33■■□□□ 1.01
PDZD4-202ENST00000393758 PTPN23Q9H3S7 1636 aa21.31■■□□□ 1
PDZD4-202ENST00000393758 EIF5BO60841 1220 aaKnown RBP21.29■■□□□ 1
PDZD4-202ENST00000393758 EFCAB5A4FU69 1503 aa21.27■■□□□ 1
PDZD4-202ENST00000393758 GAPVD1Q14C86 1478 aa21.26■□□□□ 0.99
PDZD4-202ENST00000393758 RGS3P49796 1198 aa21.26■□□□□ 0.99
PDZD4-202ENST00000393758 SLC4A3P48751 1232 aa21.26■□□□□ 0.99
PDZD4-202ENST00000393758 CHMP7Q8WUX9 453 aaPredicted RBP21.25■□□□□ 0.99
PDZD4-202ENST00000393758 NUP155O75694 1391 aa21.25■□□□□ 0.99
PDZD4-202ENST00000393758 PDE4AP27815 886 aa21.25■□□□□ 0.99
PDZD4-202ENST00000393758 RRP1P56182 461 aaKnown RBP21.25■□□□□ 0.99
PDZD4-202ENST00000393758 TOPBP1Q92547 1522 aa21.25■□□□□ 0.99
PDZD4-202ENST00000393758 SKAP1Q86WV1 359 aa21.24■□□□□ 0.99
PDZD4-202ENST00000393758 ARXQ96QS3 562 aa21.23■□□□□ 0.99
PDZD4-202ENST00000393758 PLEKHD1A6NEE1 506 aa21.22■□□□□ 0.99
PDZD4-202ENST00000393758 CANXP27824 592 aaKnown RBP21.22■□□□□ 0.99
PDZD4-202ENST00000393758 WDR43Q15061 677 aaKnown RBP eCLIP21.22■□□□□ 0.99
PDZD4-202ENST00000393758 PNISRQ8TF01 805 aaKnown RBP21.22■□□□□ 0.99
PDZD4-202ENST00000393758 CDCA7LQ96GN5 454 aa21.22■□□□□ 0.99
PDZD4-202ENST00000393758 NCOA1Q15788 1441 aa21.22■□□□□ 0.99
PDZD4-202ENST00000393758 TCERG1O14776 1098 aaKnown RBP21.2■□□□□ 0.98
PDZD4-202ENST00000393758 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.19■□□□□ 0.98
PDZD4-202ENST00000393758 CDK13Q14004 1512 aaKnown RBP21.18■□□□□ 0.98
PDZD4-202ENST00000393758 CFAP43Q8NDM7 1665 aa21.18■□□□□ 0.98
PDZD4-202ENST00000393758 ROCK2O75116 1388 aaKnown RBP21.17■□□□□ 0.98
PDZD4-202ENST00000393758 IL27Q8NEV9 243 aa21.17■□□□□ 0.98
PDZD4-202ENST00000393758 ANKRD30BQ9BXX2 1392 aa21.17■□□□□ 0.98
PDZD4-202ENST00000393758 PPM1GO15355 546 aaPredicted RBP21.16■□□□□ 0.98
PDZD4-202ENST00000393758 ABCA10Q8WWZ4 1543 aa21.16■□□□□ 0.98
PDZD4-202ENST00000393758 MYBBP1AQ9BQG0 1328 aaKnown RBP21.16■□□□□ 0.98
PDZD4-202ENST00000393758 RALBP1Q15311 655 aa21.16■□□□□ 0.98
PDZD4-202ENST00000393758 SMG6Q86US8 1419 aaKnown RBP21.15■□□□□ 0.98
PDZD4-202ENST00000393758 EHBP1L1Q8N3D4 1523 aa21.14■□□□□ 0.98
PDZD4-202ENST00000393758 SUPT6HQ7KZ85 1726 aaKnown RBP21.14■□□□□ 0.98
PDZD4-202ENST00000393758 KIF15Q9NS87 1388 aa21.14■□□□□ 0.97
PDZD4-202ENST00000393758 HNRNPMP52272 730 aaKnown RBP eCLIP21.14■□□□□ 0.97
PDZD4-202ENST00000393758 NLRP13Q86W25 1043 aa21.14■□□□□ 0.97
PDZD4-202ENST00000393758 KTN1Q86UP2 1357 aaKnown RBP21.14■□□□□ 0.97
PDZD4-202ENST00000393758 CRBNQ96SW2 442 aa21.14■□□□□ 0.97
PDZD4-202ENST00000393758 PDS5BQ9NTI5 1447 aa21.14■□□□□ 0.97
PDZD4-202ENST00000393758 DNAJC5BQ9UF47 199 aa21.13■□□□□ 0.97
PDZD4-202ENST00000393758 DDRGK1Q96HY6 314 aa21.12■□□□□ 0.97
PDZD4-202ENST00000393758 SNAPC4Q5SXM2 1469 aa21.1■□□□□ 0.97
PDZD4-202ENST00000393758 ANO8Q9HCE9 1232 aaPredicted RBP21.1■□□□□ 0.97
PDZD4-202ENST00000393758 ANKRD30AQ9BXX3 1397 aa21.09■□□□□ 0.97
PDZD4-202ENST00000393758 DNMBPQ6XZF7 1577 aa21.08■□□□□ 0.97
PDZD4-202ENST00000393758 KNSTRNQ9Y448 316 aa21.08■□□□□ 0.96
PDZD4-202ENST00000393758 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.06■□□□□ 0.96
PDZD4-202ENST00000393758 NEUROD2Q15784 382 aa21.06■□□□□ 0.96
PDZD4-202ENST00000393758 PANK3Q9H999 370 aa21.06■□□□□ 0.96
PDZD4-202ENST00000393758 DAPK1P53355 1430 aa21.06■□□□□ 0.96
PDZD4-202ENST00000393758 EPRSP07814 1512 aaKnown RBP21.05■□□□□ 0.96
PDZD4-202ENST00000393758 RPRD2Q5VT52 1461 aaKnown RBP21.04■□□□□ 0.96
PDZD4-202ENST00000393758 GRIN2BQ13224 1484 aa21.04■□□□□ 0.96
PDZD4-202ENST00000393758 NBPF1Q3BBV0 1214 aa21.02■□□□□ 0.96
PDZD4-202ENST00000393758 CCDC146Q8IYE0 955 aa21.02■□□□□ 0.96
PDZD4-202ENST00000393758 MIA2Q96PC5 1412 aa21.01■□□□□ 0.95
PDZD4-202ENST00000393758 ABCC5O15440 1437 aa21.01■□□□□ 0.95
PDZD4-202ENST00000393758 CC2D2AQ9P2K1 1620 aa21.01■□□□□ 0.95
PDZD4-202ENST00000393758 TMF1P82094 1093 aa21■□□□□ 0.95
PDZD4-202ENST00000393758 PRG4Q92954 1404 aaPredicted RBP21■□□□□ 0.95
PDZD4-202ENST00000393758 BACH2Q9BYV9 841 aa20.99■□□□□ 0.95
PDZD4-202ENST00000393758 PRDM2Q13029 1718 aa20.99■□□□□ 0.95
PDZD4-202ENST00000393758 PDE3BQ13370 1112 aa20.99■□□□□ 0.95
PDZD4-202ENST00000393758 SENP3Q9H4L4 574 aaPredicted RBP20.99■□□□□ 0.95
PDZD4-202ENST00000393758 UGGT2Q9NYU1 1516 aa20.98■□□□□ 0.95
PDZD4-202ENST00000393758 TNNT2P45379 298 aaPredicted RBP20.98■□□□□ 0.95
PDZD4-202ENST00000393758 FRAT1Q92837 279 aaPredicted RBP20.98■□□□□ 0.95
PDZD4-202ENST00000393758 KDM6BO15054 1643 aa20.97■□□□□ 0.95
PDZD4-202ENST00000393758 ANKRD50Q9ULJ7 1429 aa20.96■□□□□ 0.95
PDZD4-202ENST00000393758 CHGAP10645 457 aaKnown RBP20.95■□□□□ 0.94
PDZD4-202ENST00000393758 CUL7Q14999 1698 aa20.95■□□□□ 0.94
PDZD4-202ENST00000393758 BRD4O60885 1362 aaPredicted RBP20.95■□□□□ 0.94
PDZD4-202ENST00000393758 KIAA1107Q9UPP5 1409 aa20.95■□□□□ 0.94
PDZD4-202ENST00000393758 DHX29Q7Z478 1369 aaKnown RBP20.94■□□□□ 0.94
PDZD4-202ENST00000393758 C20orf194Q5TEA3 1177 aa20.94■□□□□ 0.94
PDZD4-202ENST00000393758 BRPF3Q9ULD4 1205 aa20.94■□□□□ 0.94
PDZD4-202ENST00000393758 URB2Q14146 1524 aaKnown RBP20.94■□□□□ 0.94
PDZD4-202ENST00000393758 MAGI3Q5TCQ9 1506 aa20.93■□□□□ 0.94
PDZD4-202ENST00000393758 THOC2Q8NI27 1593 aaKnown RBP20.93■□□□□ 0.94
PDZD4-202ENST00000393758 ADAMTS8Q9UP79 889 aa20.92■□□□□ 0.94
PDZD4-202ENST00000393758 MS4A1P11836 297 aa20.92■□□□□ 0.94
PDZD4-202ENST00000393758 SLKQ9H2G2 1235 aaPredicted RBP20.92■□□□□ 0.94
PDZD4-202ENST00000393758 SPRYD3Q8NCJ5 442 aa20.91■□□□□ 0.94
PDZD4-202ENST00000393758 ARID4BQ4LE39 1312 aaPredicted RBP20.9■□□□□ 0.94
PDZD4-202ENST00000393758 HECW1Q76N89 1606 aa20.9■□□□□ 0.94
PDZD4-202ENST00000393758 NFKBIBQ15653 356 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms