RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 CFTRP13569 1480 aa15.09■□□□□ 0.01
SMAD9-202ENST00000379826 NCAPD3P42695 1498 aa15.08■□□□□ 0.01
SMAD9-202ENST00000379826 SLC24A1O60721 1099 aa15.08■□□□□ 0
SMAD9-202ENST00000379826 PKD2Q13563 968 aa15.08■□□□□ 0
SMAD9-202ENST00000379826 DCAF11Q8TEB1 546 aa15.08■□□□□ 0
SMAD9-202ENST00000379826 WDR43Q15061 677 aaKnown RBP eCLIP15.08■□□□□ 0
SMAD9-202ENST00000379826 NUDCQ9Y266 331 aa15.07■□□□□ 0
SMAD9-202ENST00000379826 CASKIN1Q8WXD9 1431 aa15.07■□□□□ 0
SMAD9-202ENST00000379826 EIF5BO60841 1220 aaKnown RBP15.06■□□□□ 0
SMAD9-202ENST00000379826 NCOA2Q15596 1464 aa15.06■□□□□ 0
SMAD9-202ENST00000379826 ZBED9Q6R2W3 1325 aa15.05■□□□□ 0
SMAD9-202ENST00000379826 FYCO1Q9BQS8 1478 aa15.05■□□□□ 0
SMAD9-202ENST00000379826 MYOM3Q5VTT5 1437 aa15.05■□□□□ -0
SMAD9-202ENST00000379826 CNTLNQ9NXG0 1405 aa15.05■□□□□ -0
SMAD9-202ENST00000379826 ARXQ96QS3 562 aa15.04■□□□□ -0
SMAD9-202ENST00000379826 PLEKHG5O94827 1062 aa15.04■□□□□ -0
SMAD9-202ENST00000379826 CCDC7Q96M83 1385 aa15.03■□□□□ -0
SMAD9-202ENST00000379826 IPO9Q96P70 1041 aaKnown RBP15.02■□□□□ -0
SMAD9-202ENST00000379826 KIF7Q2M1P5 1343 aa15.01□□□□□ -0.01
SMAD9-202ENST00000379826 PLEKHD1A6NEE1 506 aa15□□□□□ -0.01
SMAD9-202ENST00000379826 DDRGK1Q96HY6 314 aa14.99□□□□□ -0.01
SMAD9-202ENST00000379826 RCAN3Q9UKA8 241 aa14.99□□□□□ -0.01
SMAD9-202ENST00000379826 ZNF644Q9H582 1327 aaPredicted RBP14.98□□□□□ -0.01
SMAD9-202ENST00000379826 RGS3P49796 1198 aa14.98□□□□□ -0.01
SMAD9-202ENST00000379826 HMGXB3Q12766 1538 aa14.97□□□□□ -0.01
SMAD9-202ENST00000379826 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.97□□□□□ -0.01
SMAD9-202ENST00000379826 HFM1A2PYH4 1435 aa14.97□□□□□ -0.01
SMAD9-202ENST00000379826 AKNAQ7Z591 1439 aa14.96□□□□□ -0.02
SMAD9-202ENST00000379826 EXOC6Q8TAG9 804 aa14.95□□□□□ -0.02
SMAD9-202ENST00000379826 NBPF8Q3BBV2 869 aa14.95□□□□□ -0.02
SMAD9-202ENST00000379826 ROCK2O75116 1388 aaKnown RBP14.94□□□□□ -0.02
SMAD9-202ENST00000379826 USP47Q96K76 1375 aa14.94□□□□□ -0.02
SMAD9-202ENST00000379826 C11orf95C9JLR9 678 aaPredicted RBP14.94□□□□□ -0.02
SMAD9-202ENST00000379826 PHF23Q9BUL5 403 aaPredicted RBP14.94□□□□□ -0.02
SMAD9-202ENST00000379826 PLIN1O60240 522 aa14.94□□□□□ -0.02
SMAD9-202ENST00000379826 NUP155O75694 1391 aa14.93□□□□□ -0.02
SMAD9-202ENST00000379826 PPM1GO15355 546 aaPredicted RBP14.93□□□□□ -0.02
SMAD9-202ENST00000379826 PAK3O75914 559 aaPredicted RBP14.92□□□□□ -0.02
SMAD9-202ENST00000379826 KTN1Q86UP2 1357 aaKnown RBP14.92□□□□□ -0.02
SMAD9-202ENST00000379826 NAIPQ13075 1403 aa14.92□□□□□ -0.02
SMAD9-202ENST00000379826 KNSTRNQ9Y448 316 aa14.92□□□□□ -0.02
SMAD9-202ENST00000379826 EFCAB5A4FU69 1503 aa14.92□□□□□ -0.02
SMAD9-202ENST00000379826 ST20-MTHFSA0A0A6YYL1 179 aa14.91□□□□□ -0.02
SMAD9-202ENST00000379826 MAP3K1Q13233 1512 aa14.91□□□□□ -0.02
SMAD9-202ENST00000379826 NESP48681 1621 aa14.91□□□□□ -0.02
SMAD9-202ENST00000379826 GAPVD1Q14C86 1478 aa14.91□□□□□ -0.02
SMAD9-202ENST00000379826 RALBP1Q15311 655 aa14.89□□□□□ -0.03
SMAD9-202ENST00000379826 RRP1P56182 461 aaKnown RBP14.89□□□□□ -0.03
SMAD9-202ENST00000379826 ZBTB7CA1YPR0 619 aa14.88□□□□□ -0.03
SMAD9-202ENST00000379826 TCERG1O14776 1098 aaKnown RBP14.88□□□□□ -0.03
SMAD9-202ENST00000379826 PTPN23Q9H3S7 1636 aa14.88□□□□□ -0.03
SMAD9-202ENST00000379826 PTPRKQ15262 1439 aa14.88□□□□□ -0.03
SMAD9-202ENST00000379826 KIF15Q9NS87 1388 aa14.88□□□□□ -0.03
SMAD9-202ENST00000379826 POLA1P09884 1462 aaPredicted RBP14.87□□□□□ -0.03
SMAD9-202ENST00000379826 MYBBP1AQ9BQG0 1328 aaKnown RBP14.87□□□□□ -0.03
SMAD9-202ENST00000379826 NEUROD2Q15784 382 aa14.87□□□□□ -0.03
SMAD9-202ENST00000379826 SUPT6HQ7KZ85 1726 aaKnown RBP14.87□□□□□ -0.03
SMAD9-202ENST00000379826 EHBP1L1Q8N3D4 1523 aa14.87□□□□□ -0.03
SMAD9-202ENST00000379826 SLC4A3P48751 1232 aa14.87□□□□□ -0.03
SMAD9-202ENST00000379826 ANKRD30AQ9BXX3 1397 aa14.86□□□□□ -0.03
SMAD9-202ENST00000379826 HNRNPMP52272 730 aaKnown RBP eCLIP14.86□□□□□ -0.032e-6■■■■□ 21.3
SMAD9-202ENST00000379826 UPF2Q9HAU5 1272 aaKnown RBP14.86□□□□□ -0.03
SMAD9-202ENST00000379826 DNAJC5BQ9UF47 199 aa14.86□□□□□ -0.03
SMAD9-202ENST00000379826 PDE4AP27815 886 aa14.86□□□□□ -0.03
SMAD9-202ENST00000379826 PRDM2Q13029 1718 aa14.86□□□□□ -0.03
SMAD9-202ENST00000379826 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.85□□□□□ -0.03
SMAD9-202ENST00000379826 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.84□□□□□ -0.03
SMAD9-202ENST00000379826 TMF1P82094 1093 aa14.84□□□□□ -0.03
SMAD9-202ENST00000379826 TOPBP1Q92547 1522 aa14.84□□□□□ -0.03
SMAD9-202ENST00000379826 TNNT2P45379 298 aaPredicted RBP14.83□□□□□ -0.03
SMAD9-202ENST00000379826 AQRO60306 1485 aaKnown RBP eCLIP14.83□□□□□ -0.04
SMAD9-202ENST00000379826 FRAT1Q92837 279 aaPredicted RBP14.82□□□□□ -0.04
SMAD9-202ENST00000379826 CRBNQ96SW2 442 aa14.82□□□□□ -0.04
SMAD9-202ENST00000379826 CFAP43Q8NDM7 1665 aa14.81□□□□□ -0.04
SMAD9-202ENST00000379826 CDK13Q14004 1512 aaKnown RBP14.81□□□□□ -0.04
SMAD9-202ENST00000379826 NLRP13Q86W25 1043 aa14.8□□□□□ -0.04
SMAD9-202ENST00000379826 CCDC146Q8IYE0 955 aa14.8□□□□□ -0.04
SMAD9-202ENST00000379826 LMOD2Q6P5Q4 547 aa14.78□□□□□ -0.04
SMAD9-202ENST00000379826 DNMBPQ6XZF7 1577 aa14.78□□□□□ -0.04
SMAD9-202ENST00000379826 PANK3Q9H999 370 aa14.78□□□□□ -0.04
SMAD9-202ENST00000379826 DCAF8L1A6NGE4 600 aa14.78□□□□□ -0.04
SMAD9-202ENST00000379826 SPRYD3Q8NCJ5 442 aa14.78□□□□□ -0.04
SMAD9-202ENST00000379826 FAM69CQ0P6D2 419 aa14.77□□□□□ -0.04
SMAD9-202ENST00000379826 SMG6Q86US8 1419 aaKnown RBP14.77□□□□□ -0.04
SMAD9-202ENST00000379826 CDCA7LQ96GN5 454 aa14.77□□□□□ -0.04
SMAD9-202ENST00000379826 BECN1Q14457 450 aa14.77□□□□□ -0.05
SMAD9-202ENST00000379826 CC2D2AQ9P2K1 1620 aa14.76□□□□□ -0.05
SMAD9-202ENST00000379826 ABCA10Q8WWZ4 1543 aa14.76□□□□□ -0.05
SMAD9-202ENST00000379826 DAPK1P53355 1430 aa14.75□□□□□ -0.05
SMAD9-202ENST00000379826 HSP90AA1P07900 732 aaKnown RBP14.74□□□□□ -0.05
SMAD9-202ENST00000379826 HECW1Q76N89 1606 aa14.74□□□□□ -0.05
SMAD9-202ENST00000379826 NCOA1Q15788 1441 aa14.73□□□□□ -0.05
SMAD9-202ENST00000379826 MEX3CQ5U5Q3 659 aaKnown RBP14.73□□□□□ -0.05
SMAD9-202ENST00000379826 CUL7Q14999 1698 aa14.73□□□□□ -0.05
SMAD9-202ENST00000379826 PDE3BQ13370 1112 aa14.72□□□□□ -0.05
SMAD9-202ENST00000379826 SKAP1Q86WV1 359 aa14.72□□□□□ -0.05
SMAD9-202ENST00000379826 PNISRQ8TF01 805 aaKnown RBP14.72□□□□□ -0.05
SMAD9-202ENST00000379826 CDCA8Q53HL2 280 aa14.71□□□□□ -0.05
SMAD9-202ENST00000379826 EPRSP07814 1512 aaKnown RBP14.71□□□□□ -0.05
SMAD9-202ENST00000379826 ANKRD30BQ9BXX2 1392 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms