RNA–Protein interactions for RNA: ENST00000378588.4

CYBB-201, Transcript of cytochrome b-245 beta chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYBB, Length 4,324 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYBB-201ENST00000378588 CASKIN1Q8WXD9 1431 aa8.07□□□□□ -1.12
CYBB-201ENST00000378588 ROCK2O75116 1388 aaKnown RBP8.07□□□□□ -1.12
CYBB-201ENST00000378588 MYOM3Q5VTT5 1437 aa8.07□□□□□ -1.12
CYBB-201ENST00000378588 BECN1Q14457 450 aa8.07□□□□□ -1.12
CYBB-201ENST00000378588 GAPVD1Q14C86 1478 aa8.07□□□□□ -1.12
CYBB-201ENST00000378588 RCAN3Q9UKA8 241 aa8.06□□□□□ -1.12
CYBB-201ENST00000378588 HNRNPMP52272 730 aaKnown RBP eCLIP8.05□□□□□ -1.12
CYBB-201ENST00000378588 NEUROD2Q15784 382 aa8.05□□□□□ -1.12
CYBB-201ENST00000378588 EFCAB2Q5VUJ9 269 aa8.05□□□□□ -1.12
CYBB-201ENST00000378588 NLRP13Q86W25 1043 aa8.05□□□□□ -1.12
CYBB-201ENST00000378588 KANK1Q14678 1352 aa8.04□□□□□ -1.12
CYBB-201ENST00000378588 RGS3P49796 1198 aa8.04□□□□□ -1.12
CYBB-201ENST00000378588 ANP32BQ92688 251 aaKnown RBP8.04□□□□□ -1.12
CYBB-201ENST00000378588 CUX1P39880 1505 aa8.04□□□□□ -1.12
CYBB-201ENST00000378588 ST20-MTHFSA0A0A6YYL1 179 aa8.04□□□□□ -1.12
CYBB-201ENST00000378588 ZBED9Q6R2W3 1325 aa8.03□□□□□ -1.12
CYBB-201ENST00000378588 PDE3BQ13370 1112 aa8.03□□□□□ -1.12
CYBB-201ENST00000378588 HMGXB3Q12766 1538 aa8.02□□□□□ -1.13
CYBB-201ENST00000378588 TCERG1O14776 1098 aaKnown RBP8.02□□□□□ -1.13
CYBB-201ENST00000378588 FRAT1Q92837 279 aaPredicted RBP8.02□□□□□ -1.13
CYBB-201ENST00000378588 MYH16Q9H6N6 1097 aa8.02□□□□□ -1.13
CYBB-201ENST00000378588 FYCO1Q9BQS8 1478 aa8.02□□□□□ -1.13
CYBB-201ENST00000378588 TNNT2P45379 298 aaPredicted RBP8.02□□□□□ -1.13
CYBB-201ENST00000378588 FTSJ3Q8IY81 847 aaKnown RBP8.02□□□□□ -1.13
CYBB-201ENST00000378588 SENP3Q9H4L4 574 aaPredicted RBP8.02□□□□□ -1.13
CYBB-201ENST00000378588 LAS1LQ9Y4W2 734 aaKnown RBP8.02□□□□□ -1.13
CYBB-201ENST00000378588 NCOA2Q15596 1464 aa8.01□□□□□ -1.13
CYBB-201ENST00000378588 EIF5BO60841 1220 aaKnown RBP8.01□□□□□ -1.13
CYBB-201ENST00000378588 KIF15Q9NS87 1388 aa8.01□□□□□ -1.13
CYBB-201ENST00000378588 USP47Q96K76 1375 aa8.01□□□□□ -1.13
CYBB-201ENST00000378588 MAPK8IP3Q9UPT6 1336 aa8.01□□□□□ -1.13
CYBB-201ENST00000378588 MYBBP1AQ9BQG0 1328 aaKnown RBP8□□□□□ -1.13
CYBB-201ENST00000378588 ZNF644Q9H582 1327 aaPredicted RBP8□□□□□ -1.13
CYBB-201ENST00000378588 CCDC7Q96M83 1385 aa8□□□□□ -1.13
CYBB-201ENST00000378588 MS4A1P11836 297 aa8□□□□□ -1.13
CYBB-201ENST00000378588 MORC1Q86VD1 984 aa8□□□□□ -1.13
CYBB-201ENST00000378588 PRDM2Q13029 1718 aa7.99□□□□□ -1.13
CYBB-201ENST00000378588 WASHC2AQ641Q2 1341 aa7.99□□□□□ -1.13
CYBB-201ENST00000378588 POGKQ9P215 609 aa7.99□□□□□ -1.13
CYBB-201ENST00000378588 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.99□□□□□ -1.13
CYBB-201ENST00000378588 KIF7Q2M1P5 1343 aa7.99□□□□□ -1.13
CYBB-201ENST00000378588 TIAM1Q13009 1591 aa7.98□□□□□ -1.13
CYBB-201ENST00000378588 EFCAB5A4FU69 1503 aa7.98□□□□□ -1.13
CYBB-201ENST00000378588 ARID4BQ4LE39 1312 aaPredicted RBP7.98□□□□□ -1.13
CYBB-201ENST00000378588 HFM1A2PYH4 1435 aa7.98□□□□□ -1.13
CYBB-201ENST00000378588 CCDC144AA2RUR9 1427 aa7.98□□□□□ -1.13
CYBB-201ENST00000378588 U2SURPO15042 1029 aaKnown RBP7.97□□□□□ -1.13
CYBB-201ENST00000378588 ARXQ96QS3 562 aa7.97□□□□□ -1.13
CYBB-201ENST00000378588 DEKP35659 375 aaKnown RBP7.97□□□□□ -1.13
CYBB-201ENST00000378588 GOLGA2Q08379 1002 aa7.97□□□□□ -1.13
CYBB-201ENST00000378588 IPO9Q96P70 1041 aaKnown RBP7.97□□□□□ -1.13
CYBB-201ENST00000378588 SPAG9O60271 1321 aaKnown RBP7.97□□□□□ -1.13
CYBB-201ENST00000378588 PNNQ9H307 717 aaKnown RBP7.97□□□□□ -1.13
CYBB-201ENST00000378588 PTPRGP23470 1445 aa7.96□□□□□ -1.13
CYBB-201ENST00000378588 CNTLNQ9NXG0 1405 aa7.96□□□□□ -1.13
CYBB-201ENST00000378588 KIF3BO15066 747 aa7.96□□□□□ -1.13
CYBB-201ENST00000378588 GGT6Q6P531 493 aa7.96□□□□□ -1.13
CYBB-201ENST00000378588 PANK3Q9H999 370 aa7.96□□□□□ -1.13
CYBB-201ENST00000378588 CHMP4BQ9H444 224 aaKnown RBP7.96□□□□□ -1.14
CYBB-201ENST00000378588 AQRO60306 1485 aaKnown RBP eCLIP7.96□□□□□ -1.14
CYBB-201ENST00000378588 FANCIQ9NVI1 1328 aa7.95□□□□□ -1.14
CYBB-201ENST00000378588 POLA1P09884 1462 aaPredicted RBP7.95□□□□□ -1.14
CYBB-201ENST00000378588 PLPPR3Q6T4P5 718 aa7.95□□□□□ -1.14
CYBB-201ENST00000378588 EIF3AQ14152 1382 aaKnown RBP7.95□□□□□ -1.14
CYBB-201ENST00000378588 TOPBP1Q92547 1522 aa7.95□□□□□ -1.14
CYBB-201ENST00000378588 BIVM-ERCC5R4GMW8 1640 aa7.94□□□□□ -1.14
CYBB-201ENST00000378588 SRPK2P78362 688 aaKnown RBP7.94□□□□□ -1.14
CYBB-201ENST00000378588 MIA2Q96PC5 1412 aa7.94□□□□□ -1.14
CYBB-201ENST00000378588 MAP3K1Q13233 1512 aa7.94□□□□□ -1.14
CYBB-201ENST00000378588 ANKRD50Q9ULJ7 1429 aa7.94□□□□□ -1.14
CYBB-201ENST00000378588 RRP1P56182 461 aaKnown RBP7.93□□□□□ -1.14
CYBB-201ENST00000378588 GOLGA6L22H0YM25 854 aa7.93□□□□□ -1.14
CYBB-201ENST00000378588 GRIN2BQ13224 1484 aa7.93□□□□□ -1.14
CYBB-201ENST00000378588 NESP48681 1621 aa7.92□□□□□ -1.14
CYBB-201ENST00000378588 U2AF1L5P0DN76 240 aaPredicted RBP7.92□□□□□ -1.14
CYBB-201ENST00000378588 U2AF1Q01081 240 aaKnown RBP eCLIP7.92□□□□□ -1.14
CYBB-201ENST00000378588 WDR97A6NE52 1622 aa7.92□□□□□ -1.14
CYBB-201ENST00000378588 SAFB2Q14151 953 aaKnown RBP eCLIP7.92□□□□□ -1.14
CYBB-201ENST00000378588 NBPF8Q3BBV2 869 aa7.92□□□□□ -1.14
CYBB-201ENST00000378588 NAIPQ13075 1403 aa7.92□□□□□ -1.14
CYBB-201ENST00000378588 EXOC6Q8TAG9 804 aa7.92□□□□□ -1.14
CYBB-201ENST00000378588 EHBP1L1Q8N3D4 1523 aa7.91□□□□□ -1.14
CYBB-201ENST00000378588 ABCA10Q8WWZ4 1543 aa7.9□□□□□ -1.14
CYBB-201ENST00000378588 CCDC146Q8IYE0 955 aa7.9□□□□□ -1.14
CYBB-201ENST00000378588 RWDD1Q9H446 243 aaPredicted RBP7.9□□□□□ -1.14
CYBB-201ENST00000378588 IPO8O15397 1037 aaKnown RBP7.9□□□□□ -1.14
CYBB-201ENST00000378588 PDE4AP27815 886 aa7.9□□□□□ -1.14
CYBB-201ENST00000378588 STAC3Q96MF2 364 aa7.9□□□□□ -1.14
CYBB-201ENST00000378588 STK26Q9P289 416 aa7.9□□□□□ -1.14
CYBB-201ENST00000378588 CASC1Q6TDU7 716 aa7.89□□□□□ -1.15
CYBB-201ENST00000378588 TRIM44Q96DX7 344 aaPredicted RBP7.89□□□□□ -1.15
CYBB-201ENST00000378588 DNMBPQ6XZF7 1577 aa7.89□□□□□ -1.15
CYBB-201ENST00000378588 PLIN1O60240 522 aa7.89□□□□□ -1.15
CYBB-201ENST00000378588 HDGFL2Q7Z4V5 671 aaPredicted RBP7.89□□□□□ -1.15
CYBB-201ENST00000378588 PMFBP1Q8TBY8 1022 aa7.89□□□□□ -1.15
CYBB-201ENST00000378588 CENPJQ9HC77 1338 aaPredicted RBP7.89□□□□□ -1.15
CYBB-201ENST00000378588 CENPQQ7L2Z9 268 aaPredicted RBP7.89□□□□□ -1.15
CYBB-201ENST00000378588 BRD4O60885 1362 aaPredicted RBP7.88□□□□□ -1.15
CYBB-201ENST00000378588 NGEFQ8N5V2 710 aa7.88□□□□□ -1.15
CYBB-201ENST00000378588 HDGFP51858 240 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms