RNA–Protein interactions for RNA: ENST00000367520.3

COLGALT2-202, Transcript of collagen beta(1-O)galactosyltransferase 2, humanhuman

TSL 2 BASIC

Gene COLGALT2, Length 2,325 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT2-202ENST00000367520 ERCC6Q03468 1493 aa12.11□□□□□ -0.47
COLGALT2-202ENST00000367520 NKX1-1Q15270 411 aaPredicted RBP12.11□□□□□ -0.47
COLGALT2-202ENST00000367520 RNF216Q9NWF9 866 aaPredicted RBP12.1□□□□□ -0.47
COLGALT2-202ENST00000367520 TRAIPQ9BWF2 469 aa12.1□□□□□ -0.47
COLGALT2-202ENST00000367520 AQRO60306 1485 aaKnown RBP eCLIP12.1□□□□□ -0.47
COLGALT2-202ENST00000367520 ABCA10Q8WWZ4 1543 aa12.08□□□□□ -0.48
COLGALT2-202ENST00000367520 IL27Q8NEV9 243 aa12.08□□□□□ -0.48
COLGALT2-202ENST00000367520 SCAF1Q9H7N4 1312 aaKnown RBP12.07□□□□□ -0.48
COLGALT2-202ENST00000367520 ZNF608Q9ULD9 1512 aaPredicted RBP12.07□□□□□ -0.48
COLGALT2-202ENST00000367520 GZF1Q9H116 711 aaPredicted RBP12.06□□□□□ -0.48
COLGALT2-202ENST00000367520 GPBP1L1Q9HC44 474 aaPredicted RBP12.06□□□□□ -0.48
COLGALT2-202ENST00000367520 ARAP1Q96P48 1450 aa12.05□□□□□ -0.48
COLGALT2-202ENST00000367520 MRC2Q9UBG0 1479 aa12.05□□□□□ -0.48
COLGALT2-202ENST00000367520 HS6ST3Q8IZP7 471 aa12.05□□□□□ -0.48
COLGALT2-202ENST00000367520 ERICH3Q5RHP9 1530 aa12.04□□□□□ -0.48
COLGALT2-202ENST00000367520 E9PSI1 815 aa12.04□□□□□ -0.48
COLGALT2-202ENST00000367520 GTPBP6O43824 516 aaPredicted RBP12.04□□□□□ -0.48
COLGALT2-202ENST00000367520 ATP1B4Q9UN42 357 aaPredicted RBP12.03□□□□□ -0.48
COLGALT2-202ENST00000367520 GAPVD1Q14C86 1478 aa12.03□□□□□ -0.48
COLGALT2-202ENST00000367520 KCNV2Q8TDN2 545 aa12.03□□□□□ -0.48
COLGALT2-202ENST00000367520 ARHGAP35Q9NRY4 1499 aa12.01□□□□□ -0.49
COLGALT2-202ENST00000367520 VPS8Q8N3P4 1428 aa12.01□□□□□ -0.49
COLGALT2-202ENST00000367520 TARBP1Q13395 1621 aaKnown RBP12□□□□□ -0.49
COLGALT2-202ENST00000367520 WDR97A6NE52 1622 aa12□□□□□ -0.49
COLGALT2-202ENST00000367520 KANK4Q5T7N3 995 aaPredicted RBP12□□□□□ -0.49
COLGALT2-202ENST00000367520 CWC22Q9HCG8 908 aaKnown RBP11.99□□□□□ -0.49
COLGALT2-202ENST00000367520 ABCA5Q8WWZ7 1642 aa11.98□□□□□ -0.49
COLGALT2-202ENST00000367520 NEFLP07196 543 aa11.98□□□□□ -0.49
COLGALT2-202ENST00000367520 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.97□□□□□ -0.49
COLGALT2-202ENST00000367520 BCL11BQ9C0K0 894 aaPredicted RBP11.97□□□□□ -0.49
COLGALT2-202ENST00000367520 FHOD3Q2V2M9 1422 aa11.97□□□□□ -0.49
COLGALT2-202ENST00000367520 BRPF3Q9ULD4 1205 aa11.97□□□□□ -0.49
COLGALT2-202ENST00000367520 HNRNPUL2Q1KMD3 747 aaKnown RBP11.95□□□□□ -0.5
COLGALT2-202ENST00000367520 WDR70Q9NW82 654 aa11.95□□□□□ -0.5
COLGALT2-202ENST00000367520 WDR62O43379 1518 aa11.95□□□□□ -0.5
COLGALT2-202ENST00000367520 ZFP91Q96JP5 570 aaPredicted RBP11.94□□□□□ -0.5
COLGALT2-202ENST00000367520 THOC2Q8NI27 1593 aaKnown RBP11.94□□□□□ -0.5
COLGALT2-202ENST00000367520 PPM1GO15355 546 aaPredicted RBP11.93□□□□□ -0.5
COLGALT2-202ENST00000367520 BCCIPQ9P287 314 aaKnown RBP eCLIP11.92□□□□□ -0.5
COLGALT2-202ENST00000367520 RSPH4AQ5TD94 716 aa11.92□□□□□ -0.5
COLGALT2-202ENST00000367520 ZNF592Q92610 1267 aa11.91□□□□□ -0.5
COLGALT2-202ENST00000367520 IRX6P78412 446 aaPredicted RBP11.91□□□□□ -0.5
COLGALT2-202ENST00000367520 CERS3Q8IU89 383 aa11.91□□□□□ -0.5
COLGALT2-202ENST00000367520 SNAPC4Q5SXM2 1469 aa11.9□□□□□ -0.5
COLGALT2-202ENST00000367520 PBRM1Q86U86 1689 aa11.89□□□□□ -0.51
COLGALT2-202ENST00000367520 EIF4G3O43432 1585 aaKnown RBP11.88□□□□□ -0.51
COLGALT2-202ENST00000367520 IFT140Q96RY7 1462 aa11.88□□□□□ -0.51
COLGALT2-202ENST00000367520 CUL7Q14999 1698 aa11.88□□□□□ -0.51
COLGALT2-202ENST00000367520 ITGAEP38570 1179 aa11.88□□□□□ -0.51
COLGALT2-202ENST00000367520 ZMYND10O75800 440 aa11.87□□□□□ -0.51
COLGALT2-202ENST00000367520 IRF5Q13568 498 aa11.87□□□□□ -0.51
COLGALT2-202ENST00000367520 CLUAP1Q96AJ1 413 aa11.87□□□□□ -0.51
COLGALT2-202ENST00000367520 GRIN2BQ13224 1484 aa11.86□□□□□ -0.51
COLGALT2-202ENST00000367520 TMED8Q6PL24 325 aaPredicted RBP11.86□□□□□ -0.51
COLGALT2-202ENST00000367520 ADAMTS12P58397 1594 aa11.84□□□□□ -0.51
COLGALT2-202ENST00000367520 TRAK2O60296 914 aa11.84□□□□□ -0.51
COLGALT2-202ENST00000367520 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.84□□□□□ -0.51
COLGALT2-202ENST00000367520 PCF11O94913 1555 aaKnown RBP11.84□□□□□ -0.51
COLGALT2-202ENST00000367520 FHAD1B1AJZ9 1412 aa11.83□□□□□ -0.51
COLGALT2-202ENST00000367520 RETREG2Q8NC44 543 aa11.83□□□□□ -0.51
COLGALT2-202ENST00000367520 CHMP7Q8WUX9 453 aaPredicted RBP11.83□□□□□ -0.51
COLGALT2-202ENST00000367520 ZNF316A6NFI3 1004 aaPredicted RBP11.83□□□□□ -0.52
COLGALT2-202ENST00000367520 MKRN4PQ13434 485 aaPredicted RBP11.83□□□□□ -0.52
COLGALT2-202ENST00000367520 CTTNBP2Q8WZ74 1663 aa11.83□□□□□ -0.52
COLGALT2-202ENST00000367520 TICAM2Q86XR7 235 aa11.82□□□□□ -0.52
COLGALT2-202ENST00000367520 KDM4CQ9H3R0 1056 aa11.82□□□□□ -0.52
COLGALT2-202ENST00000367520 CCER1Q8TC90 406 aaPredicted RBP11.81□□□□□ -0.52
COLGALT2-202ENST00000367520 FBXW7Q969H0 707 aa11.81□□□□□ -0.52
COLGALT2-202ENST00000367520 RNF25Q96BH1 459 aaPredicted RBP11.81□□□□□ -0.52
COLGALT2-202ENST00000367520 CIZ1Q9ULV3 898 aaPredicted RBP11.8□□□□□ -0.52
COLGALT2-202ENST00000367520 CCDC125Q86Z20 511 aa11.78□□□□□ -0.52
COLGALT2-202ENST00000367520 ARID4BQ4LE39 1312 aaPredicted RBP11.78□□□□□ -0.52
COLGALT2-202ENST00000367520 PSMD1Q99460 953 aa11.78□□□□□ -0.52
COLGALT2-202ENST00000367520 BARGINQ6ZT62 677 aa11.77□□□□□ -0.52
COLGALT2-202ENST00000367520 GRIN2AQ12879 1464 aa11.76□□□□□ -0.53
COLGALT2-202ENST00000367520 PHLDB1Q86UU1 1377 aa11.74□□□□□ -0.53
COLGALT2-202ENST00000367520 TIAM1Q13009 1591 aa11.74□□□□□ -0.53
COLGALT2-202ENST00000367520 IQGAP2Q13576 1575 aa11.74□□□□□ -0.53
COLGALT2-202ENST00000367520 PKNOX2Q96KN3 472 aa11.74□□□□□ -0.53
COLGALT2-202ENST00000367520 CEP170Q5SW79 1584 aa11.73□□□□□ -0.53
COLGALT2-202ENST00000367520 ONECUT3O60422 494 aaPredicted RBP11.73□□□□□ -0.53
COLGALT2-202ENST00000367520 FAM50AQ14320 339 aaKnown RBP11.73□□□□□ -0.53
COLGALT2-202ENST00000367520 ZNF777Q9ULD5 760 aaPredicted RBP11.73□□□□□ -0.53
COLGALT2-202ENST00000367520 SEMA3EO15041 775 aa11.72□□□□□ -0.53
COLGALT2-202ENST00000367520 SAMD9Q5K651 1589 aa11.72□□□□□ -0.53
COLGALT2-202ENST00000367520 CLSTN1O94985 981 aa11.72□□□□□ -0.53
COLGALT2-202ENST00000367520 FGD1P98174 961 aa11.72□□□□□ -0.53
COLGALT2-202ENST00000367520 A6NJR5 290 aa11.71□□□□□ -0.53
COLGALT2-202ENST00000367520 FLIIQ13045 1269 aa11.71□□□□□ -0.53
COLGALT2-202ENST00000367520 CC2D2BQ6DHV5 1058 aa11.71□□□□□ -0.53
COLGALT2-202ENST00000367520 CCDC136Q96JN2 1154 aa11.71□□□□□ -0.53
COLGALT2-202ENST00000367520 LRRC9Q6ZRR7 1453 aa11.71□□□□□ -0.53
COLGALT2-202ENST00000367520 EFCAB5A4FU69 1503 aa11.71□□□□□ -0.53
COLGALT2-202ENST00000367520 KDM4AO75164 1064 aa11.7□□□□□ -0.54
COLGALT2-202ENST00000367520 LRRIQ1Q96JM4 1722 aa11.7□□□□□ -0.54
COLGALT2-202ENST00000367520 SYNJ2O15056 1496 aa11.7□□□□□ -0.54
COLGALT2-202ENST00000367520 CDK13Q14004 1512 aaKnown RBP11.7□□□□□ -0.54
COLGALT2-202ENST00000367520 CASKIN1Q8WXD9 1431 aa11.69□□□□□ -0.54
COLGALT2-202ENST00000367520 PRDM16Q9HAZ2 1276 aa11.69□□□□□ -0.54
COLGALT2-202ENST00000367520 MAGI1Q96QZ7 1491 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms