RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 UACAQ9BZF9 1416 aa15.22■□□□□ 0.03
CDC42BPA-202ENST00000366764 RGL3Q3MIN7 710 aa15.22■□□□□ 0.03
CDC42BPA-202ENST00000366764 RCAN3Q9UKA8 241 aa15.22■□□□□ 0.03
CDC42BPA-202ENST00000366764 KIF15Q9NS87 1388 aa15.21■□□□□ 0.03
CDC42BPA-202ENST00000366764 ERCC6Q03468 1493 aa15.21■□□□□ 0.03
CDC42BPA-202ENST00000366764 DCAF11Q8TEB1 546 aa15.2■□□□□ 0.02
CDC42BPA-202ENST00000366764 NLRP13Q86W25 1043 aa15.2■□□□□ 0.02
CDC42BPA-202ENST00000366764 RSPH4AQ5TD94 716 aa15.2■□□□□ 0.02
CDC42BPA-202ENST00000366764 FGD6Q6ZV73 1430 aa15.2■□□□□ 0.02
CDC42BPA-202ENST00000366764 IPO9Q96P70 1041 aaKnown RBP15.19■□□□□ 0.02
CDC42BPA-202ENST00000366764 NCLP19338 710 aaKnown RBP15.19■□□□□ 0.02
CDC42BPA-202ENST00000366764 PKD2Q13563 968 aa15.18■□□□□ 0.02
CDC42BPA-202ENST00000366764 MYOM3Q5VTT5 1437 aa15.18■□□□□ 0.02
CDC42BPA-202ENST00000366764 LAS1LQ9Y4W2 734 aaKnown RBP15.17■□□□□ 0.02
CDC42BPA-202ENST00000366764 CASKIN1Q8WXD9 1431 aa15.17■□□□□ 0.02
CDC42BPA-202ENST00000366764 PTMSP20962 102 aa15.17■□□□□ 0.02
CDC42BPA-202ENST00000366764 MAPK8IP3Q9UPT6 1336 aa15.17■□□□□ 0.02
CDC42BPA-202ENST00000366764 NUP155O75694 1391 aa15.16■□□□□ 0.02
CDC42BPA-202ENST00000366764 HMGXB3Q12766 1538 aa15.16■□□□□ 0.02
CDC42BPA-202ENST00000366764 TIAM1Q13009 1591 aa15.16■□□□□ 0.02
CDC42BPA-202ENST00000366764 SUPT6HQ7KZ85 1726 aaKnown RBP15.15■□□□□ 0.02
CDC42BPA-202ENST00000366764 L3MBTL2Q969R5 705 aa15.15■□□□□ 0.02
CDC42BPA-202ENST00000366764 FANCD2Q9BXW9 1451 aa15.15■□□□□ 0.02
CDC42BPA-202ENST00000366764 RGS3P49796 1198 aa15.15■□□□□ 0.02
CDC42BPA-202ENST00000366764 FGD5Q6ZNL6 1462 aa15.14■□□□□ 0.01
CDC42BPA-202ENST00000366764 NCAPD3P42695 1498 aa15.14■□□□□ 0.01
CDC42BPA-202ENST00000366764 HAP1P54257 671 aaPredicted RBP15.13■□□□□ 0.01
CDC42BPA-202ENST00000366764 PRXQ9BXM0 1461 aa15.12■□□□□ 0.01
CDC42BPA-202ENST00000366764 CC2D1BQ5T0F9 858 aaKnown RBP15.11■□□□□ 0.01
CDC42BPA-202ENST00000366764 MYBBP1AQ9BQG0 1328 aaKnown RBP15.11■□□□□ 0.01
CDC42BPA-202ENST00000366764 MAP3K1Q13233 1512 aa15.11■□□□□ 0.01
CDC42BPA-202ENST00000366764 PRKRIP1Q9H875 184 aaPredicted RBP15.11■□□□□ 0.01
CDC42BPA-202ENST00000366764 HSCBQ8IWL3 235 aa15.11■□□□□ 0.01
CDC42BPA-202ENST00000366764 ARAP1Q96P48 1450 aa15.1■□□□□ 0.01
CDC42BPA-202ENST00000366764 PRDM2Q13029 1718 aa15.1■□□□□ 0.01
CDC42BPA-202ENST00000366764 ARXQ96QS3 562 aa15.1■□□□□ 0.01
CDC42BPA-202ENST00000366764 NGEFQ8N5V2 710 aa15.09■□□□□ 0.01
CDC42BPA-202ENST00000366764 IGF1RP08069 1367 aa15.09■□□□□ 0.01
CDC42BPA-202ENST00000366764 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.09■□□□□ 0.01
CDC42BPA-202ENST00000366764 USP47Q96K76 1375 aa15.09■□□□□ 0.01
CDC42BPA-202ENST00000366764 CNTLNQ9NXG0 1405 aa15.08■□□□□ 0.01
CDC42BPA-202ENST00000366764 EHBP1L1Q8N3D4 1523 aa15.08■□□□□ 0
CDC42BPA-202ENST00000366764 TNNT2P45379 298 aaPredicted RBP15.08■□□□□ 0
CDC42BPA-202ENST00000366764 KCNH8Q96L42 1107 aa15.08■□□□□ 0
CDC42BPA-202ENST00000366764 TDRD9Q8NDG6 1382 aaKnown RBP15.08■□□□□ 0
CDC42BPA-202ENST00000366764 UNC13AQ9UPW8 1703 aa15.07■□□□□ 0
CDC42BPA-202ENST00000366764 IPO8O15397 1037 aaKnown RBP15.06■□□□□ 0
CDC42BPA-202ENST00000366764 CFTRP13569 1480 aa15.06■□□□□ 0
CDC42BPA-202ENST00000366764 GAPVD1Q14C86 1478 aa15.06■□□□□ 0
CDC42BPA-202ENST00000366764 PEG3Q9GZU2 1588 aa15.05■□□□□ -0
CDC42BPA-202ENST00000366764 CCDC144AA2RUR9 1427 aa15.05■□□□□ -0
CDC42BPA-202ENST00000366764 FRAT1Q92837 279 aaPredicted RBP15.05■□□□□ -0
CDC42BPA-202ENST00000366764 CALD1Q05682 793 aaKnown RBP15.04■□□□□ -0
CDC42BPA-202ENST00000366764 RWDD1Q9H446 243 aaPredicted RBP15.04■□□□□ -0
CDC42BPA-202ENST00000366764 HSP90AB1P08238 724 aaKnown RBP15.04■□□□□ -0
CDC42BPA-202ENST00000366764 MIA2Q96PC5 1412 aa15.04■□□□□ -0
CDC42BPA-202ENST00000366764 HECW1Q76N89 1606 aa15.03■□□□□ -0
CDC42BPA-202ENST00000366764 CUL7Q14999 1698 aa15.03■□□□□ -0
CDC42BPA-202ENST00000366764 HFM1A2PYH4 1435 aa15.02■□□□□ -0
CDC42BPA-202ENST00000366764 FOXD1Q16676 465 aa15.02■□□□□ -0
CDC42BPA-202ENST00000366764 PMFBP1Q8TBY8 1022 aa15.02■□□□□ -0
CDC42BPA-202ENST00000366764 PTMAP06454 111 aaKnown RBP15.02□□□□□ -0.01
CDC42BPA-202ENST00000366764 GBP4Q96PP9 640 aa15.02□□□□□ -0.01
CDC42BPA-202ENST00000366764 MORC1Q86VD1 984 aa15.02□□□□□ -0.01
CDC42BPA-202ENST00000366764 NCOA2Q15596 1464 aa15.01□□□□□ -0.01
CDC42BPA-202ENST00000366764 CCDC7Q96M83 1385 aa15.01□□□□□ -0.01
CDC42BPA-202ENST00000366764 CENPQQ7L2Z9 268 aaPredicted RBP15.01□□□□□ -0.01
CDC42BPA-202ENST00000366764 BIVM-ERCC5R4GMW8 1640 aa15.01□□□□□ -0.01
CDC42BPA-202ENST00000366764 GOLGA2Q08379 1002 aa15.01□□□□□ -0.01
CDC42BPA-202ENST00000366764 NAP1L5Q96NT1 182 aaPredicted RBP15□□□□□ -0.01
CDC42BPA-202ENST00000366764 AAMPQ13685 434 aa14.97□□□□□ -0.01
CDC42BPA-202ENST00000366764 NEUROD2Q15784 382 aa14.97□□□□□ -0.01
CDC42BPA-202ENST00000366764 STAC3Q96MF2 364 aa14.97□□□□□ -0.01
CDC42BPA-202ENST00000366764 AQRO60306 1485 aaKnown RBP eCLIP14.97□□□□□ -0.011e-6■■■■■ 27.7
CDC42BPA-202ENST00000366764 RRP1P56182 461 aaKnown RBP14.97□□□□□ -0.01
CDC42BPA-202ENST00000366764 POGKQ9P215 609 aa14.96□□□□□ -0.01
CDC42BPA-202ENST00000366764 EFCAB2Q5VUJ9 269 aa14.96□□□□□ -0.01
CDC42BPA-202ENST00000366764 BRD4O60885 1362 aaPredicted RBP14.96□□□□□ -0.02
CDC42BPA-202ENST00000366764 WDR97A6NE52 1622 aa14.96□□□□□ -0.02
CDC42BPA-202ENST00000366764 CGNL1Q0VF96 1302 aa14.95□□□□□ -0.02
CDC42BPA-202ENST00000366764 MCCP23508 829 aa14.95□□□□□ -0.02
CDC42BPA-202ENST00000366764 CC2D2AQ9P2K1 1620 aa14.94□□□□□ -0.02
CDC42BPA-202ENST00000366764 CENPJQ9HC77 1338 aaPredicted RBP14.93□□□□□ -0.02
CDC42BPA-202ENST00000366764 FAM161AQ3B820 660 aa14.93□□□□□ -0.02
CDC42BPA-202ENST00000366764 ZRSR1Q15695 479 aaKnown RBP14.93□□□□□ -0.02
CDC42BPA-202ENST00000366764 SENP3-EIF4A1A0A087X0R7 540 aa14.92□□□□□ -0.02
CDC42BPA-202ENST00000366764 MSNP26038 577 aaKnown RBP14.92□□□□□ -0.02
CDC42BPA-202ENST00000366764 DNMBPQ6XZF7 1577 aa14.92□□□□□ -0.02
CDC42BPA-202ENST00000366764 CHAF1AQ13111 956 aaPredicted RBP14.91□□□□□ -0.02
CDC42BPA-202ENST00000366764 WASHC2AQ641Q2 1341 aa14.91□□□□□ -0.02
CDC42BPA-202ENST00000366764 WASHC2CQ9Y4E1 1318 aa14.91□□□□□ -0.02
CDC42BPA-202ENST00000366764 U2SURPO15042 1029 aaKnown RBP14.91□□□□□ -0.02
CDC42BPA-202ENST00000366764 PDE4AP27815 886 aa14.91□□□□□ -0.02
CDC42BPA-202ENST00000366764 CHMP4AQ9BY43 222 aa14.91□□□□□ -0.02
CDC42BPA-202ENST00000366764 ST20-MTHFSA0A0A6YYL1 179 aa14.9□□□□□ -0.02
CDC42BPA-202ENST00000366764 NRDCO43847 1150 aa14.9□□□□□ -0.02
CDC42BPA-202ENST00000366764 DNTTIP2Q5QJE6 756 aaKnown RBP14.9□□□□□ -0.02
CDC42BPA-202ENST00000366764 GOLGA6L6A8MZA4 724 aa14.9□□□□□ -0.02
CDC42BPA-202ENST00000366764 KIF7Q2M1P5 1343 aa14.89□□□□□ -0.03
CDC42BPA-202ENST00000366764 RTN4Q9NQC3 1192 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms