RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 TOPBP1Q92547 1522 aa9.09□□□□□ -0.95
RTN4-203ENST00000357376 NUP155O75694 1391 aa9.09□□□□□ -0.95
RTN4-203ENST00000357376 CNTLNQ9NXG0 1405 aa9.08□□□□□ -0.96
RTN4-203ENST00000357376 DEKP35659 375 aaKnown RBP9.08□□□□□ -0.96
RTN4-203ENST00000357376 WDR43Q15061 677 aaKnown RBP eCLIP9.08□□□□□ -0.96
RTN4-203ENST00000357376 MAP3K1Q13233 1512 aa9.08□□□□□ -0.96
RTN4-203ENST00000357376 C11orf95C9JLR9 678 aaPredicted RBP9.08□□□□□ -0.96
RTN4-203ENST00000357376 EFCAB5A4FU69 1503 aa9.07□□□□□ -0.96
RTN4-203ENST00000357376 PTPRKQ15262 1439 aa9.07□□□□□ -0.96
RTN4-203ENST00000357376 ST20-MTHFSA0A0A6YYL1 179 aa9.06□□□□□ -0.96
RTN4-203ENST00000357376 USP47Q96K76 1375 aa9.06□□□□□ -0.96
RTN4-203ENST00000357376 FANCIQ9NVI1 1328 aa9.06□□□□□ -0.96
RTN4-203ENST00000357376 AQRO60306 1485 aaKnown RBP eCLIP9.05□□□□□ -0.967e-8■■■■■ 28.3
RTN4-203ENST00000357376 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.05□□□□□ -0.96
RTN4-203ENST00000357376 CHGAP10645 457 aaKnown RBP9.05□□□□□ -0.96
RTN4-203ENST00000357376 MSH5O43196 834 aa9.05□□□□□ -0.96
RTN4-203ENST00000357376 HNRNPMP52272 730 aaKnown RBP eCLIP9.04□□□□□ -0.967e-7■■■■□ 22.8
RTN4-203ENST00000357376 ANKRD30AQ9BXX3 1397 aa9.04□□□□□ -0.96
RTN4-203ENST00000357376 ROCK2O75116 1388 aaKnown RBP9.04□□□□□ -0.96
RTN4-203ENST00000357376 RCAN3Q9UKA8 241 aa9.03□□□□□ -0.96
RTN4-203ENST00000357376 ABCA10Q8WWZ4 1543 aa9.03□□□□□ -0.96
RTN4-203ENST00000357376 DNAJC5BQ9UF47 199 aa9.03□□□□□ -0.96
RTN4-203ENST00000357376 CC2D2AQ9P2K1 1620 aa9.03□□□□□ -0.96
RTN4-203ENST00000357376 DNMBPQ6XZF7 1577 aa9.02□□□□□ -0.97
RTN4-203ENST00000357376 KNSTRNQ9Y448 316 aa9.02□□□□□ -0.97
RTN4-203ENST00000357376 NEFMP07197 916 aa9.02□□□□□ -0.97
RTN4-203ENST00000357376 SENP3Q9H4L4 574 aaPredicted RBP9.01□□□□□ -0.97
RTN4-203ENST00000357376 RTN4Q9NQC3 1192 aaKnown RBP9.01□□□□□ -0.97
RTN4-203ENST00000357376 AKNAQ7Z591 1439 aa9.01□□□□□ -0.97
RTN4-203ENST00000357376 EHBP1L1Q8N3D4 1523 aa9.01□□□□□ -0.97
RTN4-203ENST00000357376 CDK13Q14004 1512 aaKnown RBP9.01□□□□□ -0.97
RTN4-203ENST00000357376 RGS3P49796 1198 aa9.01□□□□□ -0.97
RTN4-203ENST00000357376 EXOC6Q8TAG9 804 aa9.01□□□□□ -0.97
RTN4-203ENST00000357376 KTN1Q86UP2 1357 aaKnown RBP9.01□□□□□ -0.97
RTN4-203ENST00000357376 GOLGA6L2Q8N9W4 650 aaPredicted RBP9□□□□□ -0.97
RTN4-203ENST00000357376 PLIN1O60240 522 aa9□□□□□ -0.97
RTN4-203ENST00000357376 PTPN23Q9H3S7 1636 aa9□□□□□ -0.97
RTN4-203ENST00000357376 RALBP1Q15311 655 aa9□□□□□ -0.97
RTN4-203ENST00000357376 IPO9Q96P70 1041 aaKnown RBP9□□□□□ -0.97
RTN4-203ENST00000357376 ERCC6Q03468 1493 aa8.99□□□□□ -0.97
RTN4-203ENST00000357376 TMF1P82094 1093 aa8.99□□□□□ -0.97
RTN4-203ENST00000357376 NLRP13Q86W25 1043 aa8.99□□□□□ -0.97
RTN4-203ENST00000357376 JPH4Q96JJ6 628 aa8.99□□□□□ -0.97
RTN4-203ENST00000357376 SUPT6HQ7KZ85 1726 aaKnown RBP8.98□□□□□ -0.97
RTN4-203ENST00000357376 KIF15Q9NS87 1388 aa8.98□□□□□ -0.97
RTN4-203ENST00000357376 NEUROD2Q15784 382 aa8.98□□□□□ -0.97
RTN4-203ENST00000357376 MYBBP1AQ9BQG0 1328 aaKnown RBP8.98□□□□□ -0.97
RTN4-203ENST00000357376 RRP1P56182 461 aaKnown RBP8.97□□□□□ -0.97
RTN4-203ENST00000357376 ARXQ96QS3 562 aa8.97□□□□□ -0.97
RTN4-203ENST00000357376 PAK3O75914 559 aaPredicted RBP8.97□□□□□ -0.97
RTN4-203ENST00000357376 CARMIL2Q6F5E8 1435 aa8.97□□□□□ -0.97
RTN4-203ENST00000357376 PRDM2Q13029 1718 aa8.96□□□□□ -0.97
RTN4-203ENST00000357376 EPRSP07814 1512 aaKnown RBP8.96□□□□□ -0.97
RTN4-203ENST00000357376 TNNT2P45379 298 aaPredicted RBP8.96□□□□□ -0.97
RTN4-203ENST00000357376 DAPK1P53355 1430 aa8.95□□□□□ -0.98
RTN4-203ENST00000357376 MIA2Q96PC5 1412 aa8.95□□□□□ -0.98
RTN4-203ENST00000357376 ANKRD30BQ9BXX2 1392 aa8.95□□□□□ -0.98
RTN4-203ENST00000357376 PRG4Q92954 1404 aaPredicted RBP8.95□□□□□ -0.98
RTN4-203ENST00000357376 DDRGK1Q96HY6 314 aa8.95□□□□□ -0.98
RTN4-203ENST00000357376 TCERG1O14776 1098 aaKnown RBP8.95□□□□□ -0.98
RTN4-203ENST00000357376 PANK3Q9H999 370 aa8.95□□□□□ -0.98
RTN4-203ENST00000357376 URB2Q14146 1524 aaKnown RBP8.94□□□□□ -0.98
RTN4-203ENST00000357376 ANKRD50Q9ULJ7 1429 aa8.94□□□□□ -0.98
RTN4-203ENST00000357376 CUL7Q14999 1698 aa8.94□□□□□ -0.98
RTN4-203ENST00000357376 CFAP43Q8NDM7 1665 aa8.94□□□□□ -0.98
RTN4-203ENST00000357376 NCOA1Q15788 1441 aa8.94□□□□□ -0.98
RTN4-203ENST00000357376 PNISRQ8TF01 805 aaKnown RBP8.94□□□□□ -0.98
RTN4-203ENST00000357376 CDCA7LQ96GN5 454 aa8.94□□□□□ -0.98
RTN4-203ENST00000357376 SNAPC4Q5SXM2 1469 aa8.93□□□□□ -0.98
RTN4-203ENST00000357376 EIF5BO60841 1220 aaKnown RBP8.93□□□□□ -0.98
RTN4-203ENST00000357376 PDE4AP27815 886 aa8.93□□□□□ -0.98
RTN4-203ENST00000357376 PPM1GO15355 546 aaPredicted RBP8.93□□□□□ -0.98
RTN4-203ENST00000357376 FRAT1Q92837 279 aaPredicted RBP8.93□□□□□ -0.98
RTN4-203ENST00000357376 CCDC146Q8IYE0 955 aa8.93□□□□□ -0.98
RTN4-203ENST00000357376 GRIN2BQ13224 1484 aa8.92□□□□□ -0.98
RTN4-203ENST00000357376 HECW1Q76N89 1606 aa8.92□□□□□ -0.98
RTN4-203ENST00000357376 CDCA8Q53HL2 280 aa8.92□□□□□ -0.98
RTN4-203ENST00000357376 CCDC144AA2RUR9 1427 aa8.92□□□□□ -0.98
RTN4-203ENST00000357376 ABCC5O15440 1437 aa8.92□□□□□ -0.98
RTN4-203ENST00000357376 CRBNQ96SW2 442 aa8.92□□□□□ -0.98
RTN4-203ENST00000357376 SLC4A3P48751 1232 aa8.91□□□□□ -0.98
RTN4-203ENST00000357376 NBPF1Q3BBV0 1214 aa8.91□□□□□ -0.98
RTN4-203ENST00000357376 UPF2Q9HAU5 1272 aaKnown RBP8.91□□□□□ -0.98
RTN4-203ENST00000357376 KIAA1107Q9UPP5 1409 aa8.91□□□□□ -0.98
RTN4-203ENST00000357376 PDE3BQ13370 1112 aa8.9□□□□□ -0.98
RTN4-203ENST00000357376 RPRD2Q5VT52 1461 aaKnown RBP8.9□□□□□ -0.98
RTN4-203ENST00000357376 SMG6Q86US8 1419 aaKnown RBP8.9□□□□□ -0.99
RTN4-203ENST00000357376 UGGT2Q9NYU1 1516 aa8.89□□□□□ -0.99
RTN4-203ENST00000357376 THOC2Q8NI27 1593 aaKnown RBP8.89□□□□□ -0.99
RTN4-203ENST00000357376 IQGAP2Q13576 1575 aa8.89□□□□□ -0.99
RTN4-203ENST00000357376 ROCK1Q13464 1354 aa8.88□□□□□ -0.99
RTN4-203ENST00000357376 ARID4BQ4LE39 1312 aaPredicted RBP8.88□□□□□ -0.99
RTN4-203ENST00000357376 SKAP1Q86WV1 359 aa8.88□□□□□ -0.99
RTN4-203ENST00000357376 TROQ12816 1431 aaPredicted RBP8.87□□□□□ -0.99
RTN4-203ENST00000357376 GOLGA2Q08379 1002 aa8.87□□□□□ -0.99
RTN4-203ENST00000357376 BRD4O60885 1362 aaPredicted RBP8.87□□□□□ -0.99
RTN4-203ENST00000357376 CTTNBP2Q8WZ74 1663 aa8.86□□□□□ -0.99
RTN4-203ENST00000357376 PLB1Q6P1J6 1458 aa8.85□□□□□ -0.99
RTN4-203ENST00000357376 C9orf84Q5VXU9 1444 aa8.85□□□□□ -0.99
RTN4-203ENST00000357376 ADAMTS8Q9UP79 889 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms