RNA–Protein interactions for RNA: ENST00000340898.6

RNFT1P3-201, Transcript of ring finger protein, transmembrane 1 pseudogene 3, humanhuman

BASIC

Gene RNFT1P3, Length 1,052 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1P3-201ENST00000340898 MRC2Q9UBG0 1479 aa11.02□□□□□ -0.65
RNFT1P3-201ENST00000340898 TIE1P35590 1138 aa11.02□□□□□ -0.65
RNFT1P3-201ENST00000340898 MFRPQ9BY79 579 aa11.02□□□□□ -0.65
RNFT1P3-201ENST00000340898 EVX2Q03828 476 aa11.01□□□□□ -0.65
RNFT1P3-201ENST00000340898 MKRN3Q13064 507 aaKnown RBP11.01□□□□□ -0.65
RNFT1P3-201ENST00000340898 CEP164Q9UPV0 1460 aa11□□□□□ -0.65
RNFT1P3-201ENST00000340898 SUPT5HO00267 1087 aaKnown RBP10.99□□□□□ -0.65
RNFT1P3-201ENST00000340898 WDR62O43379 1518 aa10.99□□□□□ -0.65
RNFT1P3-201ENST00000340898 PHF8Q9UPP1 1060 aa10.98□□□□□ -0.65
RNFT1P3-201ENST00000340898 CADPS2Q86UW7 1296 aa10.97□□□□□ -0.65
RNFT1P3-201ENST00000340898 TRPC6Q9Y210 931 aa10.97□□□□□ -0.65
RNFT1P3-201ENST00000340898 URB2Q14146 1524 aaKnown RBP10.97□□□□□ -0.65
RNFT1P3-201ENST00000340898 TTLL13PA6NNM8 815 aa10.95□□□□□ -0.66
RNFT1P3-201ENST00000340898 GALR2O43603 387 aaPredicted RBP10.95□□□□□ -0.66
RNFT1P3-201ENST00000340898 FBXO22Q8NEZ5 403 aa10.95□□□□□ -0.66
RNFT1P3-201ENST00000340898 PRDM2Q13029 1718 aa10.94□□□□□ -0.66
RNFT1P3-201ENST00000340898 BMP2KQ9NSY1 1161 aaPredicted RBP10.93□□□□□ -0.66
RNFT1P3-201ENST00000340898 KCNV2Q8TDN2 545 aa10.91□□□□□ -0.66
RNFT1P3-201ENST00000340898 TRIM35Q9UPQ4 493 aa10.89□□□□□ -0.67
RNFT1P3-201ENST00000340898 PPP1R37O75864 691 aa10.88□□□□□ -0.67
RNFT1P3-201ENST00000340898 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.88□□□□□ -0.67
RNFT1P3-201ENST00000340898 TOPBP1Q92547 1522 aa10.86□□□□□ -0.67
RNFT1P3-201ENST00000340898 GABBR2O75899 941 aa10.85□□□□□ -0.67
RNFT1P3-201ENST00000340898 TULP1O00294 542 aaPredicted RBP10.84□□□□□ -0.67
RNFT1P3-201ENST00000340898 MS4A4AQ96JQ5 239 aa10.84□□□□□ -0.67
RNFT1P3-201ENST00000340898 ARHGEF1Q92888 912 aaKnown RBP10.83□□□□□ -0.68
RNFT1P3-201ENST00000340898 ATMINO43313 823 aaPredicted RBP10.82□□□□□ -0.68
RNFT1P3-201ENST00000340898 ATN1P54259 1190 aaPredicted RBP10.82□□□□□ -0.68
RNFT1P3-201ENST00000340898 DCBLD2Q96PD2 775 aa10.82□□□□□ -0.68
RNFT1P3-201ENST00000340898 ZNF608Q9ULD9 1512 aaPredicted RBP10.82□□□□□ -0.68
RNFT1P3-201ENST00000340898 E2F4Q16254 413 aa10.81□□□□□ -0.68
RNFT1P3-201ENST00000340898 ASTLQ6HA08 431 aaPredicted RBP10.81□□□□□ -0.68
RNFT1P3-201ENST00000340898 DNMBPQ6XZF7 1577 aa10.81□□□□□ -0.68
RNFT1P3-201ENST00000340898 IER5LQ5T953 404 aa10.8□□□□□ -0.68
RNFT1P3-201ENST00000340898 LMOD2Q6P5Q4 547 aa10.8□□□□□ -0.68
RNFT1P3-201ENST00000340898 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.8□□□□□ -0.68
RNFT1P3-201ENST00000340898 ABCC8Q09428 1581 aa10.79□□□□□ -0.68
RNFT1P3-201ENST00000340898 PDE4AP27815 886 aa10.79□□□□□ -0.68
RNFT1P3-201ENST00000340898 ILDR1Q86SU0 546 aaPredicted RBP10.78□□□□□ -0.68
RNFT1P3-201ENST00000340898 IFT140Q96RY7 1462 aa10.78□□□□□ -0.68
RNFT1P3-201ENST00000340898 RAD54L2Q9Y4B4 1467 aa10.77□□□□□ -0.69
RNFT1P3-201ENST00000340898 CUX1P39880 1505 aa10.77□□□□□ -0.69
RNFT1P3-201ENST00000340898 TARBP1Q13395 1621 aaKnown RBP10.76□□□□□ -0.69
RNFT1P3-201ENST00000340898 POLA1P09884 1462 aaPredicted RBP10.76□□□□□ -0.69
RNFT1P3-201ENST00000340898 OCEL1Q9H607 264 aa10.76□□□□□ -0.69
RNFT1P3-201ENST00000340898 AQRO60306 1485 aaKnown RBP eCLIP10.75□□□□□ -0.69
RNFT1P3-201ENST00000340898 G3V3G9 751 aa10.75□□□□□ -0.69
RNFT1P3-201ENST00000340898 PLCG2P16885 1265 aa10.74□□□□□ -0.69
RNFT1P3-201ENST00000340898 LARP6Q9BRS8 491 aaKnown RBP10.73□□□□□ -0.69
RNFT1P3-201ENST00000340898 SOGA1O94964 1423 aa10.73□□□□□ -0.69
RNFT1P3-201ENST00000340898 SEC24BO95487 1268 aa10.72□□□□□ -0.69
RNFT1P3-201ENST00000340898 IRX5P78411 483 aaPredicted RBP10.72□□□□□ -0.69
RNFT1P3-201ENST00000340898 FGD5Q6ZNL6 1462 aa10.72□□□□□ -0.69
RNFT1P3-201ENST00000340898 DPY19L2Q6NUT2 758 aa10.71□□□□□ -0.69
RNFT1P3-201ENST00000340898 TDRD9Q8NDG6 1382 aaKnown RBP10.71□□□□□ -0.69
RNFT1P3-201ENST00000340898 NCKAP5LQ9HCH0 1330 aa10.71□□□□□ -0.69
RNFT1P3-201ENST00000340898 EIF4G3O43432 1585 aaKnown RBP10.7□□□□□ -0.7
RNFT1P3-201ENST00000340898 MFSD10Q14728 455 aa10.69□□□□□ -0.7
RNFT1P3-201ENST00000340898 PDCD7Q8N8D1 485 aaKnown RBP10.69□□□□□ -0.7
RNFT1P3-201ENST00000340898 L3MBTL3Q96JM7 780 aaPredicted RBP10.69□□□□□ -0.7
RNFT1P3-201ENST00000340898 TESPA1A2RU30 521 aaPredicted RBP10.68□□□□□ -0.7
RNFT1P3-201ENST00000340898 SLC39A7Q92504 469 aa10.68□□□□□ -0.7
RNFT1P3-201ENST00000340898 DDX27Q96GQ7 796 aaKnown RBP10.68□□□□□ -0.7
RNFT1P3-201ENST00000340898 CRISPLD2Q9H0B8 497 aa10.68□□□□□ -0.7
RNFT1P3-201ENST00000340898 SEMA3EO15041 775 aa10.67□□□□□ -0.7
RNFT1P3-201ENST00000340898 C7P10643 843 aa10.67□□□□□ -0.7
RNFT1P3-201ENST00000340898 BOLA1Q9Y3E2 137 aa10.67□□□□□ -0.7
RNFT1P3-201ENST00000340898 SMYD5Q6GMV2 418 aa10.66□□□□□ -0.7
RNFT1P3-201ENST00000340898 MICALL2Q8IY33 904 aa10.66□□□□□ -0.7
RNFT1P3-201ENST00000340898 TMEM132AQ24JP5 1023 aa10.65□□□□□ -0.7
RNFT1P3-201ENST00000340898 PELP1Q8IZL8 1130 aaKnown RBP10.64□□□□□ -0.71
RNFT1P3-201ENST00000340898 TMC2Q8TDI7 906 aa10.64□□□□□ -0.71
RNFT1P3-201ENST00000340898 GPHNQ9NQX3 736 aaPredicted RBP10.64□□□□□ -0.71
RNFT1P3-201ENST00000340898 ARIH1Q9Y4X5 557 aaPredicted RBP10.64□□□□□ -0.71
RNFT1P3-201ENST00000340898 SYNJ1O43426 1573 aa10.64□□□□□ -0.71
RNFT1P3-201ENST00000340898 WRNQ14191 1432 aaPredicted RBP eCLIP10.63□□□□□ -0.71
RNFT1P3-201ENST00000340898 WDR97A6NE52 1622 aa10.62□□□□□ -0.71
RNFT1P3-201ENST00000340898 LHX8Q68G74 356 aa10.62□□□□□ -0.71
RNFT1P3-201ENST00000340898 ZC3H15Q8WU90 426 aaKnown RBP10.62□□□□□ -0.71
RNFT1P3-201ENST00000340898 GTF3C3Q9Y5Q9 886 aa10.62□□□□□ -0.71
RNFT1P3-201ENST00000340898 TMEM121BQ9BXQ6 578 aaPredicted RBP10.61□□□□□ -0.71
RNFT1P3-201ENST00000340898 TOP2BQ02880 1626 aa10.61□□□□□ -0.71
RNFT1P3-201ENST00000340898 CHD1O14646 1710 aa10.61□□□□□ -0.71
RNFT1P3-201ENST00000340898 BIVM-ERCC5R4GMW8 1640 aa10.6□□□□□ -0.71
RNFT1P3-201ENST00000340898 CAMK2BQ13554 666 aa10.6□□□□□ -0.71
RNFT1P3-201ENST00000340898 SNAPC4Q5SXM2 1469 aa10.6□□□□□ -0.71
RNFT1P3-201ENST00000340898 ABCA10Q8WWZ4 1543 aa10.59□□□□□ -0.71
RNFT1P3-201ENST00000340898 METRNQ9UJH8 293 aa10.59□□□□□ -0.71
RNFT1P3-201ENST00000340898 GAPVD1Q14C86 1478 aa10.59□□□□□ -0.71
RNFT1P3-201ENST00000340898 PPP1R15BQ5SWA1 713 aa10.58□□□□□ -0.72
RNFT1P3-201ENST00000340898 COLQQ9Y215 455 aaPredicted RBP10.58□□□□□ -0.72
RNFT1P3-201ENST00000340898 GRIN2BQ13224 1484 aa10.57□□□□□ -0.72
RNFT1P3-201ENST00000340898 ABCA5Q8WWZ7 1642 aa10.56□□□□□ -0.72
RNFT1P3-201ENST00000340898 ERICH6Q7L0X2 663 aa10.56□□□□□ -0.72
RNFT1P3-201ENST00000340898 CHMP7Q8WUX9 453 aaPredicted RBP10.56□□□□□ -0.72
RNFT1P3-201ENST00000340898 PBRM1Q86U86 1689 aa10.55□□□□□ -0.72
RNFT1P3-201ENST00000340898 POTEIP0CG38 1075 aa10.55□□□□□ -0.72
RNFT1P3-201ENST00000340898 RIMBP3CA6NJZ7 1639 aa10.54□□□□□ -0.72
RNFT1P3-201ENST00000340898 RIMBP3BA6NNM3 1639 aa10.54□□□□□ -0.72
RNFT1P3-201ENST00000340898 RIMBP3Q9UFD9 1639 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms