RNA–Protein interactions for RNA: ENST00000296978.3

TMEM200A-201, Transcript of transmembrane protein 200A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM200A, Length 3,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200A-201ENST00000296978 NUDCQ9Y266 331 aa16.85■□□□□ 0.29
TMEM200A-201ENST00000296978 RGL3Q3MIN7 710 aa16.84■□□□□ 0.29
TMEM200A-201ENST00000296978 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.84■□□□□ 0.29
TMEM200A-201ENST00000296978 AKNAQ7Z591 1439 aa16.84■□□□□ 0.29
TMEM200A-201ENST00000296978 POLA1P09884 1462 aaPredicted RBP16.83■□□□□ 0.29
TMEM200A-201ENST00000296978 RTN4Q9NQC3 1192 aaKnown RBP16.82■□□□□ 0.28
TMEM200A-201ENST00000296978 PDS5BQ9NTI5 1447 aa16.81■□□□□ 0.28
TMEM200A-201ENST00000296978 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.8■□□□□ 0.28
TMEM200A-201ENST00000296978 PTPN23Q9H3S7 1636 aa16.8■□□□□ 0.28
TMEM200A-201ENST00000296978 DCAF11Q8TEB1 546 aa16.79■□□□□ 0.28
TMEM200A-201ENST00000296978 CHMP7Q8WUX9 453 aaPredicted RBP16.79■□□□□ 0.28
TMEM200A-201ENST00000296978 EFCAB5A4FU69 1503 aa16.79■□□□□ 0.28
TMEM200A-201ENST00000296978 TOPBP1Q92547 1522 aa16.77■□□□□ 0.28
TMEM200A-201ENST00000296978 IPO9Q96P70 1041 aaKnown RBP16.76■□□□□ 0.27
TMEM200A-201ENST00000296978 GAPVD1Q14C86 1478 aa16.76■□□□□ 0.27
TMEM200A-201ENST00000296978 TSPY4P0CV99 314 aa16.75■□□□□ 0.27
TMEM200A-201ENST00000296978 TSPY10P0CW01 314 aa16.75■□□□□ 0.27
TMEM200A-201ENST00000296978 CC2D1BQ5T0F9 858 aaKnown RBP16.75■□□□□ 0.27
TMEM200A-201ENST00000296978 CFAP43Q8NDM7 1665 aa16.74■□□□□ 0.27
TMEM200A-201ENST00000296978 USP47Q96K76 1375 aa16.74■□□□□ 0.27
TMEM200A-201ENST00000296978 EXOC6Q8TAG9 804 aa16.74■□□□□ 0.27
TMEM200A-201ENST00000296978 ST20-MTHFSA0A0A6YYL1 179 aa16.74■□□□□ 0.27
TMEM200A-201ENST00000296978 NEFMP07197 916 aa16.74■□□□□ 0.27
TMEM200A-201ENST00000296978 ANO8Q9HCE9 1232 aaPredicted RBP16.73■□□□□ 0.27
TMEM200A-201ENST00000296978 ABCA10Q8WWZ4 1543 aa16.71■□□□□ 0.27
TMEM200A-201ENST00000296978 RCAN3Q9UKA8 241 aa16.71■□□□□ 0.27
TMEM200A-201ENST00000296978 PLIN1O60240 522 aa16.7■□□□□ 0.26
TMEM200A-201ENST00000296978 NCOA1Q15788 1441 aa16.68■□□□□ 0.26
TMEM200A-201ENST00000296978 SUPT6HQ7KZ85 1726 aaKnown RBP16.68■□□□□ 0.26
TMEM200A-201ENST00000296978 CDK13Q14004 1512 aaKnown RBP16.68■□□□□ 0.26
TMEM200A-201ENST00000296978 NUP155O75694 1391 aa16.68■□□□□ 0.26
TMEM200A-201ENST00000296978 EHBP1L1Q8N3D4 1523 aa16.67■□□□□ 0.26
TMEM200A-201ENST00000296978 DNMBPQ6XZF7 1577 aa16.66■□□□□ 0.26
TMEM200A-201ENST00000296978 PLEKHD1A6NEE1 506 aa16.66■□□□□ 0.26
TMEM200A-201ENST00000296978 SNAPC4Q5SXM2 1469 aa16.65■□□□□ 0.26
TMEM200A-201ENST00000296978 ANKRD30BQ9BXX2 1392 aa16.65■□□□□ 0.26
TMEM200A-201ENST00000296978 PNISRQ8TF01 805 aaKnown RBP16.64■□□□□ 0.25
TMEM200A-201ENST00000296978 URB2Q14146 1524 aaKnown RBP16.64■□□□□ 0.25
TMEM200A-201ENST00000296978 RRP1P56182 461 aaKnown RBP16.64■□□□□ 0.25
TMEM200A-201ENST00000296978 PDE4AP27815 886 aa16.62■□□□□ 0.25
TMEM200A-201ENST00000296978 CDCA7LQ96GN5 454 aa16.62■□□□□ 0.25
TMEM200A-201ENST00000296978 SKAP1Q86WV1 359 aa16.61■□□□□ 0.25
TMEM200A-201ENST00000296978 RGS3P49796 1198 aa16.61■□□□□ 0.25
TMEM200A-201ENST00000296978 ROCK2O75116 1388 aaKnown RBP16.6■□□□□ 0.25
TMEM200A-201ENST00000296978 SLC4A3P48751 1232 aa16.6■□□□□ 0.25
TMEM200A-201ENST00000296978 SMG6Q86US8 1419 aaKnown RBP16.6■□□□□ 0.25
TMEM200A-201ENST00000296978 WDR43Q15061 677 aaKnown RBP eCLIP16.59■□□□□ 0.25
TMEM200A-201ENST00000296978 GRIN2BQ13224 1484 aa16.59■□□□□ 0.25
TMEM200A-201ENST00000296978 MYBBP1AQ9BQG0 1328 aaKnown RBP16.59■□□□□ 0.25
TMEM200A-201ENST00000296978 TCERG1O14776 1098 aaKnown RBP16.59■□□□□ 0.25
TMEM200A-201ENST00000296978 HNRNPMP52272 730 aaKnown RBP eCLIP16.59■□□□□ 0.25
TMEM200A-201ENST00000296978 EPRSP07814 1512 aaKnown RBP16.59■□□□□ 0.25
TMEM200A-201ENST00000296978 RALBP1Q15311 655 aa16.58■□□□□ 0.25
TMEM200A-201ENST00000296978 KIF15Q9NS87 1388 aa16.58■□□□□ 0.25
TMEM200A-201ENST00000296978 NLRP13Q86W25 1043 aa16.57■□□□□ 0.24
TMEM200A-201ENST00000296978 DAPK1P53355 1430 aa16.57■□□□□ 0.24
TMEM200A-201ENST00000296978 ANKRD30AQ9BXX3 1397 aa16.57■□□□□ 0.24
TMEM200A-201ENST00000296978 CUL7Q14999 1698 aa16.57■□□□□ 0.24
TMEM200A-201ENST00000296978 CANXP27824 592 aaKnown RBP16.57■□□□□ 0.24
TMEM200A-201ENST00000296978 KTN1Q86UP2 1357 aaKnown RBP16.57■□□□□ 0.24
TMEM200A-201ENST00000296978 RPRD2Q5VT52 1461 aaKnown RBP16.56■□□□□ 0.24
TMEM200A-201ENST00000296978 UGGT2Q9NYU1 1516 aa16.55■□□□□ 0.24
TMEM200A-201ENST00000296978 MIA2Q96PC5 1412 aa16.55■□□□□ 0.24
TMEM200A-201ENST00000296978 PRDM2Q13029 1718 aa16.55■□□□□ 0.24
TMEM200A-201ENST00000296978 EIF5BO60841 1220 aaKnown RBP16.55■□□□□ 0.24
TMEM200A-201ENST00000296978 CRBNQ96SW2 442 aa16.54■□□□□ 0.24
TMEM200A-201ENST00000296978 ABCC5O15440 1437 aa16.53■□□□□ 0.24
TMEM200A-201ENST00000296978 KDM6BO15054 1643 aa16.53■□□□□ 0.24
TMEM200A-201ENST00000296978 PPM1GO15355 546 aaPredicted RBP16.53■□□□□ 0.24
TMEM200A-201ENST00000296978 CTTNBP2Q8WZ74 1663 aa16.53■□□□□ 0.24
TMEM200A-201ENST00000296978 ZNF608Q9ULD9 1512 aaPredicted RBP16.53■□□□□ 0.24
TMEM200A-201ENST00000296978 IL27Q8NEV9 243 aa16.52■□□□□ 0.23
TMEM200A-201ENST00000296978 ARXQ96QS3 562 aa16.52■□□□□ 0.23
TMEM200A-201ENST00000296978 PRG4Q92954 1404 aaPredicted RBP16.52■□□□□ 0.23
TMEM200A-201ENST00000296978 MAGI3Q5TCQ9 1506 aa16.51■□□□□ 0.23
TMEM200A-201ENST00000296978 DDRGK1Q96HY6 314 aa16.5■□□□□ 0.23
TMEM200A-201ENST00000296978 PANK3Q9H999 370 aa16.5■□□□□ 0.23
TMEM200A-201ENST00000296978 KNSTRNQ9Y448 316 aa16.5■□□□□ 0.23
TMEM200A-201ENST00000296978 THOC2Q8NI27 1593 aaKnown RBP16.5■□□□□ 0.23
TMEM200A-201ENST00000296978 NBPF1Q3BBV0 1214 aa16.49■□□□□ 0.23
TMEM200A-201ENST00000296978 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.49■□□□□ 0.23
TMEM200A-201ENST00000296978 KIF21AQ7Z4S6 1674 aa16.49■□□□□ 0.23
TMEM200A-201ENST00000296978 HECW1Q76N89 1606 aa16.49■□□□□ 0.23
TMEM200A-201ENST00000296978 ANKRD50Q9ULJ7 1429 aa16.48■□□□□ 0.23
TMEM200A-201ENST00000296978 KIAA1107Q9UPP5 1409 aa16.47■□□□□ 0.23
TMEM200A-201ENST00000296978 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.47■□□□□ 0.23
TMEM200A-201ENST00000296978 LAMC3Q9Y6N6 1575 aa16.47■□□□□ 0.23
TMEM200A-201ENST00000296978 DHX29Q7Z478 1369 aaKnown RBP16.46■□□□□ 0.23
TMEM200A-201ENST00000296978 KDM5BQ9UGL1 1544 aa16.46■□□□□ 0.23
TMEM200A-201ENST00000296978 TMF1P82094 1093 aa16.46■□□□□ 0.23
TMEM200A-201ENST00000296978 NEUROD2Q15784 382 aa16.46■□□□□ 0.23
TMEM200A-201ENST00000296978 PDE3BQ13370 1112 aa16.45■□□□□ 0.22
TMEM200A-201ENST00000296978 DENND4BO75064 1496 aaPredicted RBP16.45■□□□□ 0.22
TMEM200A-201ENST00000296978 BRD4O60885 1362 aaPredicted RBP16.44■□□□□ 0.22
TMEM200A-201ENST00000296978 ROCK1Q13464 1354 aa16.44■□□□□ 0.22
TMEM200A-201ENST00000296978 CCDC146Q8IYE0 955 aa16.44■□□□□ 0.22
TMEM200A-201ENST00000296978 BACH2Q9BYV9 841 aa16.44■□□□□ 0.22
TMEM200A-201ENST00000296978 JPH4Q96JJ6 628 aa16.43■□□□□ 0.22
TMEM200A-201ENST00000296978 ARID4BQ4LE39 1312 aaPredicted RBP16.43■□□□□ 0.22
TMEM200A-201ENST00000296978 MRC2Q9UBG0 1479 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms