RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 SUPT6HQ7KZ85 1726 aaKnown RBP19.83■□□□□ 0.77
CCNF-201ENST00000293968 NCOA1Q15788 1441 aa19.83■□□□□ 0.77
CCNF-201ENST00000293968 NUDCQ9Y266 331 aa19.83■□□□□ 0.77
CCNF-201ENST00000293968 EHBP1L1Q8N3D4 1523 aa19.83■□□□□ 0.77
CCNF-201ENST00000293968 GAPVD1Q14C86 1478 aa19.83■□□□□ 0.76
CCNF-201ENST00000293968 KDM5BQ9UGL1 1544 aa19.83■□□□□ 0.76
CCNF-201ENST00000293968 GRIN2BQ13224 1484 aa19.82■□□□□ 0.76
CCNF-201ENST00000293968 PRDM2Q13029 1718 aa19.81■□□□□ 0.76
CCNF-201ENST00000293968 CUL7Q14999 1698 aa19.79■□□□□ 0.76
CCNF-201ENST00000293968 CTTNBP2Q8WZ74 1663 aa19.78■□□□□ 0.76
CCNF-201ENST00000293968 CC2D2AQ9P2K1 1620 aa19.78■□□□□ 0.76
CCNF-201ENST00000293968 CDK13Q14004 1512 aaKnown RBP19.76■□□□□ 0.75
CCNF-201ENST00000293968 KDM6BO15054 1643 aa19.76■□□□□ 0.75
CCNF-201ENST00000293968 UGGT2Q9NYU1 1516 aa19.76■□□□□ 0.75
CCNF-201ENST00000293968 MAGI3Q5TCQ9 1506 aa19.75■□□□□ 0.75
CCNF-201ENST00000293968 ANKRD30BQ9BXX2 1392 aa19.75■□□□□ 0.75
CCNF-201ENST00000293968 DENND4BO75064 1496 aaPredicted RBP19.75■□□□□ 0.75
CCNF-201ENST00000293968 PKD2Q13563 968 aa19.75■□□□□ 0.75
CCNF-201ENST00000293968 CARD11Q9BXL7 1154 aa19.75■□□□□ 0.75
CCNF-201ENST00000293968 CFDP1Q9UEE9 299 aaPredicted RBP19.74■□□□□ 0.75
CCNF-201ENST00000293968 IPO9Q96P70 1041 aaKnown RBP19.73■□□□□ 0.75
CCNF-201ENST00000293968 USP47Q96K76 1375 aa19.73■□□□□ 0.75
CCNF-201ENST00000293968 LAS1LQ9Y4W2 734 aaKnown RBP19.7■□□□□ 0.74
CCNF-201ENST00000293968 URB2Q14146 1524 aaKnown RBP19.7■□□□□ 0.74
CCNF-201ENST00000293968 EPRSP07814 1512 aaKnown RBP19.69■□□□□ 0.74
CCNF-201ENST00000293968 SMG6Q86US8 1419 aaKnown RBP19.69■□□□□ 0.74
CCNF-201ENST00000293968 RPRD2Q5VT52 1461 aaKnown RBP19.68■□□□□ 0.74
CCNF-201ENST00000293968 EXOC6Q8TAG9 804 aa19.66■□□□□ 0.74
CCNF-201ENST00000293968 DAPK1P53355 1430 aa19.66■□□□□ 0.74
CCNF-201ENST00000293968 FBLN2P98095 1184 aa19.66■□□□□ 0.74
CCNF-201ENST00000293968 MIA2Q96PC5 1412 aa19.66■□□□□ 0.74
CCNF-201ENST00000293968 PNISRQ8TF01 805 aaKnown RBP19.65■□□□□ 0.74
CCNF-201ENST00000293968 SAMD9Q5K651 1589 aa19.65■□□□□ 0.74
CCNF-201ENST00000293968 TCOF1Q13428 1488 aaKnown RBP19.65■□□□□ 0.74
CCNF-201ENST00000293968 DNAJC5BQ9UF47 199 aa19.64■□□□□ 0.74
CCNF-201ENST00000293968 HECW1Q76N89 1606 aa19.64■□□□□ 0.73
CCNF-201ENST00000293968 LRRIQ1Q96JM4 1722 aa19.64■□□□□ 0.73
CCNF-201ENST00000293968 ST20-MTHFSA0A0A6YYL1 179 aa19.63■□□□□ 0.73
CCNF-201ENST00000293968 DCAF11Q8TEB1 546 aa19.63■□□□□ 0.73
CCNF-201ENST00000293968 ABCC5O15440 1437 aa19.63■□□□□ 0.73
CCNF-201ENST00000293968 RTN4Q9NQC3 1192 aaKnown RBP19.61■□□□□ 0.73
CCNF-201ENST00000293968 THOC2Q8NI27 1593 aaKnown RBP19.61■□□□□ 0.73
CCNF-201ENST00000293968 RCAN3Q9UKA8 241 aa19.61■□□□□ 0.73
CCNF-201ENST00000293968 DHX29Q7Z478 1369 aaKnown RBP19.6■□□□□ 0.73
CCNF-201ENST00000293968 TEX14Q8IWB6 1497 aa19.6■□□□□ 0.73
CCNF-201ENST00000293968 RRP1P56182 461 aaKnown RBP19.59■□□□□ 0.73
CCNF-201ENST00000293968 RGL3Q3MIN7 710 aa19.59■□□□□ 0.73
CCNF-201ENST00000293968 PDS5BQ9NTI5 1447 aa19.59■□□□□ 0.73
CCNF-201ENST00000293968 SPATA31E1Q6ZUB1 1445 aa19.59■□□□□ 0.73
CCNF-201ENST00000293968 NEFMP07197 916 aa19.58■□□□□ 0.72
CCNF-201ENST00000293968 PLIN1O60240 522 aa19.57■□□□□ 0.72
CCNF-201ENST00000293968 GCC2Q8IWJ2 1684 aa19.57■□□□□ 0.72
CCNF-201ENST00000293968 ARHGEF11O15085 1522 aa19.57■□□□□ 0.72
CCNF-201ENST00000293968 NUP155O75694 1391 aa19.56■□□□□ 0.72
CCNF-201ENST00000293968 CC2D1BQ5T0F9 858 aaKnown RBP19.56■□□□□ 0.72
CCNF-201ENST00000293968 ROCK1Q13464 1354 aa19.55■□□□□ 0.72
CCNF-201ENST00000293968 KIF15Q9NS87 1388 aa19.54■□□□□ 0.72
CCNF-201ENST00000293968 PDE4AP27815 886 aa19.54■□□□□ 0.72
CCNF-201ENST00000293968 LAMC3Q9Y6N6 1575 aa19.54■□□□□ 0.72
CCNF-201ENST00000293968 MYBBP1AQ9BQG0 1328 aaKnown RBP19.53■□□□□ 0.72
CCNF-201ENST00000293968 SKAP1Q86WV1 359 aa19.53■□□□□ 0.72
CCNF-201ENST00000293968 CDCA7LQ96GN5 454 aa19.53■□□□□ 0.72
CCNF-201ENST00000293968 DAXXQ9UER7 740 aaPredicted RBP19.53■□□□□ 0.72
CCNF-201ENST00000293968 TSPY4P0CV99 314 aa19.52■□□□□ 0.71
CCNF-201ENST00000293968 TSPY10P0CW01 314 aa19.52■□□□□ 0.71
CCNF-201ENST00000293968 PRG4Q92954 1404 aaPredicted RBP19.51■□□□□ 0.71
CCNF-201ENST00000293968 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.51■□□□□ 0.71
CCNF-201ENST00000293968 TCERG1O14776 1098 aaKnown RBP19.51■□□□□ 0.71
CCNF-201ENST00000293968 RALBP1Q15311 655 aa19.51■□□□□ 0.71
CCNF-201ENST00000293968 IQGAP2Q13576 1575 aa19.5■□□□□ 0.71
CCNF-201ENST00000293968 KIAA1107Q9UPP5 1409 aa19.5■□□□□ 0.71
CCNF-201ENST00000293968 ABCA5Q8WWZ7 1642 aa19.49■□□□□ 0.71
CCNF-201ENST00000293968 RNF123Q5XPI4 1314 aa19.49■□□□□ 0.71
CCNF-201ENST00000293968 ANKRD30AQ9BXX3 1397 aa19.49■□□□□ 0.71
CCNF-201ENST00000293968 ROCK2O75116 1388 aaKnown RBP19.49■□□□□ 0.71
CCNF-201ENST00000293968 NLRP13Q86W25 1043 aa19.46■□□□□ 0.71
CCNF-201ENST00000293968 PZPP20742 1482 aa19.45■□□□□ 0.7
CCNF-201ENST00000293968 IL27Q8NEV9 243 aa19.45■□□□□ 0.7
CCNF-201ENST00000293968 CHMP7Q8WUX9 453 aaPredicted RBP19.45■□□□□ 0.7
CCNF-201ENST00000293968 KTN1Q86UP2 1357 aaKnown RBP19.45■□□□□ 0.7
CCNF-201ENST00000293968 ARID4BQ4LE39 1312 aaPredicted RBP19.45■□□□□ 0.7
CCNF-201ENST00000293968 PLEKHD1A6NEE1 506 aa19.44■□□□□ 0.7
CCNF-201ENST00000293968 ANKRD50Q9ULJ7 1429 aa19.44■□□□□ 0.7
CCNF-201ENST00000293968 WDR62O43379 1518 aa19.44■□□□□ 0.7
CCNF-201ENST00000293968 HNRNPMP52272 730 aaKnown RBP eCLIP19.43■□□□□ 0.7
CCNF-201ENST00000293968 BRD4O60885 1362 aaPredicted RBP19.43■□□□□ 0.7
CCNF-201ENST00000293968 SLC4A3P48751 1232 aa19.43■□□□□ 0.7
CCNF-201ENST00000293968 CRBNQ96SW2 442 aa19.43■□□□□ 0.7
CCNF-201ENST00000293968 CAMSAP2Q08AD1 1489 aa19.41■□□□□ 0.7
CCNF-201ENST00000293968 BACH2Q9BYV9 841 aa19.4■□□□□ 0.7
CCNF-201ENST00000293968 NBPF1Q3BBV0 1214 aa19.39■□□□□ 0.69
CCNF-201ENST00000293968 NUP153P49790 1475 aaKnown RBP19.38■□□□□ 0.69
CCNF-201ENST00000293968 BCORL1Q5H9F3 1711 aa19.38■□□□□ 0.69
CCNF-201ENST00000293968 DNMT1P26358 1616 aaKnown RBP19.38■□□□□ 0.69
CCNF-201ENST00000293968 PPM1GO15355 546 aaPredicted RBP19.37■□□□□ 0.69
CCNF-201ENST00000293968 ANO8Q9HCE9 1232 aaPredicted RBP19.37■□□□□ 0.69
CCNF-201ENST00000293968 PDE3BQ13370 1112 aa19.36■□□□□ 0.69
CCNF-201ENST00000293968 PANK3Q9H999 370 aa19.36■□□□□ 0.69
CCNF-201ENST00000293968 TROQ12816 1431 aaPredicted RBP19.35■□□□□ 0.69
CCNF-201ENST00000293968 RGS3P49796 1198 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms