RNA–Protein interactions for RNA: ENST00000226247.2

FOXN1-201, Transcript of forkhead box N1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN1, Length 3,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1-201ENST00000226247 FGD6Q6ZV73 1430 aa13.96□□□□□ -0.17
FOXN1-201ENST00000226247 UACAQ9BZF9 1416 aa13.96□□□□□ -0.17
FOXN1-201ENST00000226247 ZBED9Q6R2W3 1325 aa13.96□□□□□ -0.17
FOXN1-201ENST00000226247 AKNAQ7Z591 1439 aa13.96□□□□□ -0.18
FOXN1-201ENST00000226247 PCF11O94913 1555 aaKnown RBP13.96□□□□□ -0.18
FOXN1-201ENST00000226247 UBE2Q2Q8WVN8 375 aa13.95□□□□□ -0.18
FOXN1-201ENST00000226247 MAP3K1Q13233 1512 aa13.95□□□□□ -0.18
FOXN1-201ENST00000226247 WDR62O43379 1518 aa13.95□□□□□ -0.18
FOXN1-201ENST00000226247 THOC2Q8NI27 1593 aaKnown RBP13.94□□□□□ -0.18
FOXN1-201ENST00000226247 IPO9Q96P70 1041 aaKnown RBP13.94□□□□□ -0.18
FOXN1-201ENST00000226247 GRIN2BQ13224 1484 aa13.93□□□□□ -0.18
FOXN1-201ENST00000226247 MPHOSPH9Q99550 1183 aa13.92□□□□□ -0.18
FOXN1-201ENST00000226247 CNTLNQ9NXG0 1405 aa13.91□□□□□ -0.18
FOXN1-201ENST00000226247 NAIPQ13075 1403 aa13.91□□□□□ -0.18
FOXN1-201ENST00000226247 CCDC7Q96M83 1385 aa13.9□□□□□ -0.18
FOXN1-201ENST00000226247 HFM1A2PYH4 1435 aa13.9□□□□□ -0.18
FOXN1-201ENST00000226247 NBPF8Q3BBV2 869 aa13.9□□□□□ -0.18
FOXN1-201ENST00000226247 FMN1Q68DA7 1419 aa13.89□□□□□ -0.19
FOXN1-201ENST00000226247 KIF7Q2M1P5 1343 aa13.88□□□□□ -0.19
FOXN1-201ENST00000226247 ARXQ96QS3 562 aa13.87□□□□□ -0.19
FOXN1-201ENST00000226247 NUDCQ9Y266 331 aa13.86□□□□□ -0.19
FOXN1-201ENST00000226247 EIF4G3O43432 1585 aaKnown RBP13.86□□□□□ -0.19
FOXN1-201ENST00000226247 CASKIN1Q8WXD9 1431 aa13.86□□□□□ -0.19
FOXN1-201ENST00000226247 PKNOX2Q96KN3 472 aa13.86□□□□□ -0.19
FOXN1-201ENST00000226247 TARBP1Q13395 1621 aaKnown RBP13.86□□□□□ -0.19
FOXN1-201ENST00000226247 TMC1Q8TDI8 760 aa13.85□□□□□ -0.19
FOXN1-201ENST00000226247 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.85□□□□□ -0.19
FOXN1-201ENST00000226247 ZNF777Q9ULD5 760 aaPredicted RBP13.84□□□□□ -0.19
FOXN1-201ENST00000226247 PTPN23Q9H3S7 1636 aa13.84□□□□□ -0.19
FOXN1-201ENST00000226247 SLC4A1APQ9BWU0 796 aaKnown RBP13.83□□□□□ -0.2
FOXN1-201ENST00000226247 FYCO1Q9BQS8 1478 aa13.83□□□□□ -0.2
FOXN1-201ENST00000226247 NCOA2Q15596 1464 aa13.82□□□□□ -0.2
FOXN1-201ENST00000226247 ABCA5Q8WWZ7 1642 aa13.81□□□□□ -0.2
FOXN1-201ENST00000226247 KDM5BQ9UGL1 1544 aa13.81□□□□□ -0.2
FOXN1-201ENST00000226247 CFAP43Q8NDM7 1665 aa13.81□□□□□ -0.2
FOXN1-201ENST00000226247 EXOC6Q8TAG9 804 aa13.8□□□□□ -0.2
FOXN1-201ENST00000226247 MYOM3Q5VTT5 1437 aa13.8□□□□□ -0.2
FOXN1-201ENST00000226247 SKAP1Q86WV1 359 aa13.8□□□□□ -0.2
FOXN1-201ENST00000226247 NCOA1Q15788 1441 aa13.79□□□□□ -0.2
FOXN1-201ENST00000226247 CUL7Q14999 1698 aa13.78□□□□□ -0.2
FOXN1-201ENST00000226247 SLC4A3P48751 1232 aa13.78□□□□□ -0.2
FOXN1-201ENST00000226247 GRIN2AQ12879 1464 aa13.77□□□□□ -0.21
FOXN1-201ENST00000226247 SMG6Q86US8 1419 aaKnown RBP13.76□□□□□ -0.21
FOXN1-201ENST00000226247 PRG4Q92954 1404 aaPredicted RBP13.76□□□□□ -0.21
FOXN1-201ENST00000226247 PDE4AP27815 886 aa13.76□□□□□ -0.21
FOXN1-201ENST00000226247 VSIG10Q8N0Z9 540 aa13.76□□□□□ -0.21
FOXN1-201ENST00000226247 SYNJ2O15056 1496 aa13.75□□□□□ -0.21
FOXN1-201ENST00000226247 ARID4BQ4LE39 1312 aaPredicted RBP13.74□□□□□ -0.21
FOXN1-201ENST00000226247 TRHP20396 242 aaPredicted RBP13.74□□□□□ -0.21
FOXN1-201ENST00000226247 KDM2AQ9Y2K7 1162 aa13.74□□□□□ -0.21
FOXN1-201ENST00000226247 PNISRQ8TF01 805 aaKnown RBP13.73□□□□□ -0.21
FOXN1-201ENST00000226247 ZNF644Q9H582 1327 aaPredicted RBP13.73□□□□□ -0.21
FOXN1-201ENST00000226247 PLIN1O60240 522 aa13.73□□□□□ -0.21
FOXN1-201ENST00000226247 DENND4BO75064 1496 aaPredicted RBP13.73□□□□□ -0.21
FOXN1-201ENST00000226247 DAXXQ9UER7 740 aaPredicted RBP13.72□□□□□ -0.21
FOXN1-201ENST00000226247 PBRM1Q86U86 1689 aa13.72□□□□□ -0.21
FOXN1-201ENST00000226247 NPM1P06748 294 aaKnown RBP eCLIP13.72□□□□□ -0.21
FOXN1-201ENST00000226247 PLEKHG5O94827 1062 aa13.71□□□□□ -0.22
FOXN1-201ENST00000226247 RCAN3Q9UKA8 241 aa13.7□□□□□ -0.22
FOXN1-201ENST00000226247 RRP1P56182 461 aaKnown RBP13.7□□□□□ -0.22
FOXN1-201ENST00000226247 KDM6BO15054 1643 aa13.7□□□□□ -0.22
FOXN1-201ENST00000226247 ADAMTS12P58397 1594 aa13.69□□□□□ -0.22
FOXN1-201ENST00000226247 PTPRGP23470 1445 aa13.69□□□□□ -0.22
FOXN1-201ENST00000226247 RNF123Q5XPI4 1314 aa13.68□□□□□ -0.22
FOXN1-201ENST00000226247 MAGI1Q96QZ7 1491 aaPredicted RBP13.68□□□□□ -0.22
FOXN1-201ENST00000226247 TCERG1O14776 1098 aaKnown RBP13.68□□□□□ -0.22
FOXN1-201ENST00000226247 CDCA7LQ96GN5 454 aa13.68□□□□□ -0.22
FOXN1-201ENST00000226247 ANKRD30BQ9BXX2 1392 aa13.67□□□□□ -0.22
FOXN1-201ENST00000226247 EFCAB5A4FU69 1503 aa13.67□□□□□ -0.22
FOXN1-201ENST00000226247 USP47Q96K76 1375 aa13.67□□□□□ -0.22
FOXN1-201ENST00000226247 CARD11Q9BXL7 1154 aa13.67□□□□□ -0.22
FOXN1-201ENST00000226247 DHX29Q7Z478 1369 aaKnown RBP13.66□□□□□ -0.22
FOXN1-201ENST00000226247 BACH2Q9BYV9 841 aa13.66□□□□□ -0.22
FOXN1-201ENST00000226247 FRAT1Q92837 279 aaPredicted RBP13.66□□□□□ -0.22
FOXN1-201ENST00000226247 PLB1Q6P1J6 1458 aa13.65□□□□□ -0.22
FOXN1-201ENST00000226247 PLEKHD1A6NEE1 506 aa13.64□□□□□ -0.23
FOXN1-201ENST00000226247 CTTNBP2Q8WZ74 1663 aa13.64□□□□□ -0.23
FOXN1-201ENST00000226247 PKD2Q13563 968 aa13.64□□□□□ -0.23
FOXN1-201ENST00000226247 GSE1Q14687 1217 aa13.64□□□□□ -0.23
FOXN1-201ENST00000226247 ERCC6L2Q5T890 1561 aa13.64□□□□□ -0.23
FOXN1-201ENST00000226247 CARMIL2Q6F5E8 1435 aa13.64□□□□□ -0.23
FOXN1-201ENST00000226247 ST20-MTHFSA0A0A6YYL1 179 aa13.64□□□□□ -0.23
FOXN1-201ENST00000226247 PPM1GO15355 546 aaPredicted RBP13.64□□□□□ -0.23
FOXN1-201ENST00000226247 SPATA31E1Q6ZUB1 1445 aa13.63□□□□□ -0.23
FOXN1-201ENST00000226247 IQGAP2Q13576 1575 aa13.63□□□□□ -0.23
FOXN1-201ENST00000226247 PLPPR3Q6T4P5 718 aa13.62□□□□□ -0.23
FOXN1-201ENST00000226247 SUPT6HQ7KZ85 1726 aaKnown RBP13.62□□□□□ -0.23
FOXN1-201ENST00000226247 KIAA0586Q9BVV6 1533 aa13.62□□□□□ -0.23
FOXN1-201ENST00000226247 CEP170Q5SW79 1584 aa13.62□□□□□ -0.23
FOXN1-201ENST00000226247 RPRD2Q5VT52 1461 aaKnown RBP13.61□□□□□ -0.23
FOXN1-201ENST00000226247 MAGI3Q5TCQ9 1506 aa13.61□□□□□ -0.23
FOXN1-201ENST00000226247 NAP1L5Q96NT1 182 aaPredicted RBP13.61□□□□□ -0.23
FOXN1-201ENST00000226247 CC2D1BQ5T0F9 858 aaKnown RBP13.6□□□□□ -0.23
FOXN1-201ENST00000226247 CRBNQ96SW2 442 aa13.6□□□□□ -0.23
FOXN1-201ENST00000226247 USP35Q9P2H5 1018 aa13.6□□□□□ -0.23
FOXN1-201ENST00000226247 ZMYND15Q9H091 742 aa13.6□□□□□ -0.23
FOXN1-201ENST00000226247 GLIPR1L2Q4G1C9 344 aa13.59□□□□□ -0.23
FOXN1-201ENST00000226247 CHD1O14646 1710 aa13.58□□□□□ -0.23
FOXN1-201ENST00000226247 NFKBIBQ15653 356 aa13.58□□□□□ -0.23
FOXN1-201ENST00000226247 DCAF11Q8TEB1 546 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms