RNA–Protein interactions for RNA: ENST00000226247.2

FOXN1-201, Transcript of forkhead box N1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN1, Length 3,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1-201ENST00000226247 NISCHQ9Y2I1 1504 aa19.82■□□□□ 0.76
FOXN1-201ENST00000226247 DCAF8L2P0C7V8 631 aa17.83■□□□□ 0.45
FOXN1-201ENST00000226247 SHROOM4Q9ULL8 1493 aa17.63■□□□□ 0.41
FOXN1-201ENST00000226247 SUPT5HO00267 1087 aaKnown RBP17.56■□□□□ 0.4
FOXN1-201ENST00000226247 PPARGC1BQ86YN6 1023 aaKnown RBP17.25■□□□□ 0.35
FOXN1-201ENST00000226247 HRCP23327 699 aa17.24■□□□□ 0.35
FOXN1-201ENST00000226247 PCGF6Q9BYE7 350 aa17.2■□□□□ 0.34
FOXN1-201ENST00000226247 ABCC9O60706 1549 aa17.19■□□□□ 0.34
FOXN1-201ENST00000226247 CCDC180Q9P1Z9 1646 aa17■□□□□ 0.31
FOXN1-201ENST00000226247 CHIC1Q5VXU3 224 aa16.98■□□□□ 0.31
FOXN1-201ENST00000226247 MYO15BQ96JP2 1530 aa16.94■□□□□ 0.3
FOXN1-201ENST00000226247 PELP1Q8IZL8 1130 aaKnown RBP16.82■□□□□ 0.28
FOXN1-201ENST00000226247 LOC105371045A0A1W2PR82 267 aa16.77■□□□□ 0.28
FOXN1-201ENST00000226247 ZCCHC6Q5VYS8 1495 aaKnown RBP16.59■□□□□ 0.25
FOXN1-201ENST00000226247 SCAF1Q9H7N4 1312 aaKnown RBP16.56■□□□□ 0.24
FOXN1-201ENST00000226247 PABPN1Q86U42 306 aaKnown RBP eCLIP16.55■□□□□ 0.24
FOXN1-201ENST00000226247 TRIM26Q12899 539 aaPredicted RBP16.48■□□□□ 0.23
FOXN1-201ENST00000226247 EHMT2Q96KQ7 1210 aa16.42■□□□□ 0.22
FOXN1-201ENST00000226247 DCAF1Q9Y4B6 1507 aa16.37■□□□□ 0.21
FOXN1-201ENST00000226247 FAM9AQ8IZU1 332 aaPredicted RBP16.32■□□□□ 0.2
FOXN1-201ENST00000226247 ZEB1P37275 1124 aaPredicted RBP16.22■□□□□ 0.19
FOXN1-201ENST00000226247 SCRIBQ14160 1630 aa16.17■□□□□ 0.18
FOXN1-201ENST00000226247 MYT1Q01538 1121 aa16.15■□□□□ 0.18
FOXN1-201ENST00000226247 TRIM41Q8WV44 630 aa16.13■□□□□ 0.17
FOXN1-201ENST00000226247 GTF3C3Q9Y5Q9 886 aa16.09■□□□□ 0.17
FOXN1-201ENST00000226247 NEUROD1Q13562 356 aa16.05■□□□□ 0.16
FOXN1-201ENST00000226247 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16■□□□□ 0.15
FOXN1-201ENST00000226247 RB1CC1Q8TDY2 1594 aa15.97■□□□□ 0.15
FOXN1-201ENST00000226247 NACADO15069 1562 aa15.97■□□□□ 0.15
FOXN1-201ENST00000226247 ACIN1Q9UKV3 1341 aaKnown RBP15.96■□□□□ 0.15
FOXN1-201ENST00000226247 TTBK1Q5TCY1 1321 aaPredicted RBP15.95■□□□□ 0.14
FOXN1-201ENST00000226247 CCER1Q8TC90 406 aaPredicted RBP15.95■□□□□ 0.14
FOXN1-201ENST00000226247 YTHDC1Q96MU7 727 aaKnown RBP15.94■□□□□ 0.14
FOXN1-201ENST00000226247 CENPBP07199 599 aaPredicted RBP15.81■□□□□ 0.12
FOXN1-201ENST00000226247 DIEXFQ68CQ4 756 aaKnown RBP15.81■□□□□ 0.12
FOXN1-201ENST00000226247 RSF1Q96T23 1441 aaPredicted RBP15.71■□□□□ 0.11
FOXN1-201ENST00000226247 CECR2Q9BXF3 1484 aa15.71■□□□□ 0.11
FOXN1-201ENST00000226247 DNAJC5BQ9UF47 199 aa15.6■□□□□ 0.09
FOXN1-201ENST00000226247 BCL11AQ9H165 835 aa15.55■□□□□ 0.08
FOXN1-201ENST00000226247 BICRAQ9NZM4 1560 aa15.48■□□□□ 0.07
FOXN1-201ENST00000226247 UNC13AQ9UPW8 1703 aa15.48■□□□□ 0.07
FOXN1-201ENST00000226247 ZNF316A6NFI3 1004 aaPredicted RBP15.48■□□□□ 0.07
FOXN1-201ENST00000226247 MIER1Q8N108 512 aa15.44■□□□□ 0.06
FOXN1-201ENST00000226247 MROH2BQ7Z745 1585 aa15.42■□□□□ 0.06
FOXN1-201ENST00000226247 HNRNPUL2Q1KMD3 747 aaKnown RBP15.42■□□□□ 0.06
FOXN1-201ENST00000226247 UBTFP17480 764 aaKnown RBP15.41■□□□□ 0.06
FOXN1-201ENST00000226247 RANGAP1P46060 587 aaPredicted RBP15.3■□□□□ 0.04
FOXN1-201ENST00000226247 BAZ1AQ9NRL2 1556 aaPredicted RBP15.29■□□□□ 0.04
FOXN1-201ENST00000226247 WIZO95785 1651 aa15.27■□□□□ 0.03
FOXN1-201ENST00000226247 CEP162Q5TB80 1403 aa15.25■□□□□ 0.03
FOXN1-201ENST00000226247 CSRNP3Q8WYN3 585 aa15.24■□□□□ 0.03
FOXN1-201ENST00000226247 BCANQ96GW7 911 aa15.23■□□□□ 0.03
FOXN1-201ENST00000226247 ANP32EQ9BTT0 268 aa15.21■□□□□ 0.03
FOXN1-201ENST00000226247 SMARCA4P51532 1647 aa15.19■□□□□ 0.02
FOXN1-201ENST00000226247 CCDC88BA6NC98 1476 aa15.19■□□□□ 0.02
FOXN1-201ENST00000226247 EIF4G1Q04637 1599 aaKnown RBP15.18■□□□□ 0.02
FOXN1-201ENST00000226247 SOGA1O94964 1423 aa15.18■□□□□ 0.02
FOXN1-201ENST00000226247 ABCC8Q09428 1581 aa15.17■□□□□ 0.02
FOXN1-201ENST00000226247 APLP2Q06481 763 aa15.12■□□□□ 0.01
FOXN1-201ENST00000226247 BAZ1BQ9UIG0 1483 aaKnown RBP15.12■□□□□ 0.01
FOXN1-201ENST00000226247 WRNQ14191 1432 aaPredicted RBP eCLIP15.12■□□□□ 0.01
FOXN1-201ENST00000226247 ATAD2BQ9ULI0 1458 aa15.11■□□□□ 0.01
FOXN1-201ENST00000226247 PRKCSHP14314 528 aaPredicted RBP15.1■□□□□ 0.01
FOXN1-201ENST00000226247 TNIKQ9UKE5 1360 aa15.1■□□□□ 0.01
FOXN1-201ENST00000226247 RUSC2Q8N2Y8 1516 aa15.1■□□□□ 0.01
FOXN1-201ENST00000226247 CC2D2AQ9P2K1 1620 aa15.08■□□□□ 0.01
FOXN1-201ENST00000226247 SUPT16HQ9Y5B9 1047 aaKnown RBP15.07■□□□□ 0
FOXN1-201ENST00000226247 TSHZ2Q9NRE2 1034 aa15.05■□□□□ -0
FOXN1-201ENST00000226247 TOP2AP11388 1531 aaKnown RBP14.99□□□□□ -0.01
FOXN1-201ENST00000226247 ITGAEP38570 1179 aa14.94□□□□□ -0.02
FOXN1-201ENST00000226247 SMARCA2P51531 1590 aa14.94□□□□□ -0.02
FOXN1-201ENST00000226247 NESP48681 1621 aa14.93□□□□□ -0.02
FOXN1-201ENST00000226247 KCNH8Q96L42 1107 aa14.93□□□□□ -0.02
FOXN1-201ENST00000226247 GOLGA3Q08378 1498 aa14.91□□□□□ -0.02
FOXN1-201ENST00000226247 CLIP1P30622 1438 aa14.9□□□□□ -0.02
FOXN1-201ENST00000226247 ERICH6Q7L0X2 663 aa14.87□□□□□ -0.03
FOXN1-201ENST00000226247 NCAPD3P42695 1498 aa14.86□□□□□ -0.03
FOXN1-201ENST00000226247 PEG3Q9GZU2 1588 aa14.84□□□□□ -0.03
FOXN1-201ENST00000226247 EEA1Q15075 1411 aa14.84□□□□□ -0.03
FOXN1-201ENST00000226247 FKBP8Q14318 412 aa14.83□□□□□ -0.04
FOXN1-201ENST00000226247 CLSPNQ9HAW4 1339 aa14.79□□□□□ -0.04
FOXN1-201ENST00000226247 DHX57Q6P158 1386 aaKnown RBP14.78□□□□□ -0.04
FOXN1-201ENST00000226247 KANK4Q5T7N3 995 aaPredicted RBP14.78□□□□□ -0.04
FOXN1-201ENST00000226247 VPS8Q8N3P4 1428 aa14.78□□□□□ -0.04
FOXN1-201ENST00000226247 DDX10Q13206 875 aaKnown RBP14.76□□□□□ -0.05
FOXN1-201ENST00000226247 CEP164Q9UPV0 1460 aa14.75□□□□□ -0.05
FOXN1-201ENST00000226247 HIRIP3Q9BW71 556 aaPredicted RBP14.75□□□□□ -0.05
FOXN1-201ENST00000226247 FBLN2P98095 1184 aa14.74□□□□□ -0.05
FOXN1-201ENST00000226247 CADPSQ9ULU8 1353 aa14.73□□□□□ -0.05
FOXN1-201ENST00000226247 TRIM52Q96A61 297 aa14.72□□□□□ -0.05
FOXN1-201ENST00000226247 RBM19Q9Y4C8 960 aaKnown RBP14.72□□□□□ -0.05
FOXN1-201ENST00000226247 ERCC6Q03468 1493 aa14.72□□□□□ -0.05
FOXN1-201ENST00000226247 RAPGEF2Q9Y4G8 1499 aa14.72□□□□□ -0.05
FOXN1-201ENST00000226247 NEFLP07196 543 aa14.7□□□□□ -0.06
FOXN1-201ENST00000226247 ANO8Q9HCE9 1232 aaPredicted RBP14.7□□□□□ -0.06
FOXN1-201ENST00000226247 HMGXB3Q12766 1538 aa14.68□□□□□ -0.06
FOXN1-201ENST00000226247 CCDC136Q96JN2 1154 aa14.67□□□□□ -0.06
FOXN1-201ENST00000226247 SIN3AQ96ST3 1273 aa14.63□□□□□ -0.07
FOXN1-201ENST00000226247 KIF21BO75037 1637 aa14.62□□□□□ -0.07
FOXN1-201ENST00000226247 NBR1Q14596 966 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms