RNA–Protein interactions for RNA: ENST00000183605.9

CLDN18-201, Transcript of claudin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLDN18, Length 3,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-201ENST00000183605 FRAT1Q92837 279 aaPredicted RBP13.3□□□□□ -0.28
CLDN18-201ENST00000183605 CNTLNQ9NXG0 1405 aa13.3□□□□□ -0.28
CLDN18-201ENST00000183605 ARHGAP35Q9NRY4 1499 aa13.3□□□□□ -0.28
CLDN18-201ENST00000183605 NFKBIBQ15653 356 aa13.3□□□□□ -0.28
CLDN18-201ENST00000183605 FOXD1Q16676 465 aa13.29□□□□□ -0.28
CLDN18-201ENST00000183605 L3MBTL2Q969R5 705 aa13.29□□□□□ -0.28
CLDN18-201ENST00000183605 RSPH6AQ9H0K4 717 aa13.29□□□□□ -0.28
CLDN18-201ENST00000183605 FHAD1B1AJZ9 1412 aa13.28□□□□□ -0.28
CLDN18-201ENST00000183605 ADAMTS12P58397 1594 aa13.28□□□□□ -0.28
CLDN18-201ENST00000183605 PRXQ9BXM0 1461 aa13.28□□□□□ -0.28
CLDN18-201ENST00000183605 RCAN3Q9UKA8 241 aa13.26□□□□□ -0.29
CLDN18-201ENST00000183605 ERICH3Q5RHP9 1530 aa13.26□□□□□ -0.29
CLDN18-201ENST00000183605 CCDC18Q5T9S5 1454 aa13.26□□□□□ -0.29
CLDN18-201ENST00000183605 LRRC9Q6ZRR7 1453 aa13.26□□□□□ -0.29
CLDN18-201ENST00000183605 NAP1L5Q96NT1 182 aaPredicted RBP13.26□□□□□ -0.29
CLDN18-201ENST00000183605 CCDC7Q96M83 1385 aa13.25□□□□□ -0.29
CLDN18-201ENST00000183605 C11orf95C9JLR9 678 aaPredicted RBP13.25□□□□□ -0.29
CLDN18-201ENST00000183605 BACH2Q9BYV9 841 aa13.25□□□□□ -0.29
CLDN18-201ENST00000183605 RIMBP3CA6NJZ7 1639 aa13.25□□□□□ -0.29
CLDN18-201ENST00000183605 RIMBP3BA6NNM3 1639 aa13.25□□□□□ -0.29
CLDN18-201ENST00000183605 RIMBP3Q9UFD9 1639 aa13.25□□□□□ -0.29
CLDN18-201ENST00000183605 PKNOX2Q96KN3 472 aa13.25□□□□□ -0.29
CLDN18-201ENST00000183605 RRP1P56182 461 aaKnown RBP13.24□□□□□ -0.29
CLDN18-201ENST00000183605 SMG6Q86US8 1419 aaKnown RBP13.23□□□□□ -0.29
CLDN18-201ENST00000183605 VSIG10Q8N0Z9 540 aa13.22□□□□□ -0.29
CLDN18-201ENST00000183605 ARID3CA6NKF2 412 aa13.22□□□□□ -0.29
CLDN18-201ENST00000183605 MS4A1P11836 297 aa13.22□□□□□ -0.29
CLDN18-201ENST00000183605 RGS3P49796 1198 aa13.22□□□□□ -0.29
CLDN18-201ENST00000183605 UACAQ9BZF9 1416 aa13.21□□□□□ -0.29
CLDN18-201ENST00000183605 KIF7Q2M1P5 1343 aa13.21□□□□□ -0.29
CLDN18-201ENST00000183605 WASHC2CQ9Y4E1 1318 aa13.21□□□□□ -0.29
CLDN18-201ENST00000183605 CUL7Q14999 1698 aa13.2□□□□□ -0.3
CLDN18-201ENST00000183605 FGD5Q6ZNL6 1462 aa13.2□□□□□ -0.3
CLDN18-201ENST00000183605 PLIN1O60240 522 aa13.2□□□□□ -0.3
CLDN18-201ENST00000183605 ZNF608Q9ULD9 1512 aaPredicted RBP13.2□□□□□ -0.3
CLDN18-201ENST00000183605 SKAP1Q86WV1 359 aa13.19□□□□□ -0.3
CLDN18-201ENST00000183605 CARMIL1Q5VZK9 1371 aa13.19□□□□□ -0.3
CLDN18-201ENST00000183605 FMN1Q68DA7 1419 aa13.19□□□□□ -0.3
CLDN18-201ENST00000183605 SLC4A1APQ9BWU0 796 aaKnown RBP13.18□□□□□ -0.3
CLDN18-201ENST00000183605 TIAM1Q13009 1591 aa13.18□□□□□ -0.3
CLDN18-201ENST00000183605 FRAT2O75474 233 aaPredicted RBP13.18□□□□□ -0.3
CLDN18-201ENST00000183605 MPHOSPH9Q99550 1183 aa13.18□□□□□ -0.3
CLDN18-201ENST00000183605 FAM43AQ8N2R8 423 aa13.15□□□□□ -0.3
CLDN18-201ENST00000183605 FHOD3Q2V2M9 1422 aa13.15□□□□□ -0.3
CLDN18-201ENST00000183605 GRIN2BQ13224 1484 aa13.14□□□□□ -0.31
CLDN18-201ENST00000183605 SYNJ2O15056 1496 aa13.14□□□□□ -0.31
CLDN18-201ENST00000183605 PNNQ9H307 717 aaKnown RBP13.14□□□□□ -0.31
CLDN18-201ENST00000183605 SLKQ9H2G2 1235 aaPredicted RBP13.13□□□□□ -0.31
CLDN18-201ENST00000183605 CRBNQ96SW2 442 aa13.13□□□□□ -0.31
CLDN18-201ENST00000183605 FGD6Q6ZV73 1430 aa13.12□□□□□ -0.31
CLDN18-201ENST00000183605 ARID4BQ4LE39 1312 aaPredicted RBP13.12□□□□□ -0.31
CLDN18-201ENST00000183605 NUP160Q12769 1436 aa13.12□□□□□ -0.31
CLDN18-201ENST00000183605 HSP90AA1P07900 732 aaKnown RBP13.12□□□□□ -0.31
CLDN18-201ENST00000183605 KDM2AQ9Y2K7 1162 aa13.12□□□□□ -0.31
CLDN18-201ENST00000183605 HSP90AA2PQ14568 343 aaPredicted RBP13.12□□□□□ -0.31
CLDN18-201ENST00000183605 NBPF8Q3BBV2 869 aa13.12□□□□□ -0.31
CLDN18-201ENST00000183605 PNISRQ8TF01 805 aaKnown RBP13.11□□□□□ -0.31
CLDN18-201ENST00000183605 L1TD1Q5T7N2 865 aaKnown RBP13.1□□□□□ -0.31
CLDN18-201ENST00000183605 BECN1Q14457 450 aa13.1□□□□□ -0.31
CLDN18-201ENST00000183605 FAM161AQ3B820 660 aa13.08□□□□□ -0.32
CLDN18-201ENST00000183605 CARD11Q9BXL7 1154 aa13.08□□□□□ -0.32
CLDN18-201ENST00000183605 GZF1Q9H116 711 aaPredicted RBP13.08□□□□□ -0.32
CLDN18-201ENST00000183605 HFM1A2PYH4 1435 aa13.08□□□□□ -0.32
CLDN18-201ENST00000183605 IGF1RP08069 1367 aa13.08□□□□□ -0.32
CLDN18-201ENST00000183605 ARHGEF11O15085 1522 aa13.08□□□□□ -0.32
CLDN18-201ENST00000183605 CDCA7LQ96GN5 454 aa13.08□□□□□ -0.32
CLDN18-201ENST00000183605 CEP170Q5SW79 1584 aa13.07□□□□□ -0.32
CLDN18-201ENST00000183605 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.07□□□□□ -0.32
CLDN18-201ENST00000183605 NCOA1Q15788 1441 aa13.07□□□□□ -0.32
CLDN18-201ENST00000183605 RNF123Q5XPI4 1314 aa13.07□□□□□ -0.32
CLDN18-201ENST00000183605 UPF2Q9HAU5 1272 aaKnown RBP13.06□□□□□ -0.32
CLDN18-201ENST00000183605 CANXP27824 592 aaKnown RBP13.06□□□□□ -0.32
CLDN18-201ENST00000183605 PDE3BQ13370 1112 aa13.05□□□□□ -0.32
CLDN18-201ENST00000183605 NAIPQ13075 1403 aa13.05□□□□□ -0.32
CLDN18-201ENST00000183605 SPRYD3Q8NCJ5 442 aa13.04□□□□□ -0.32
CLDN18-201ENST00000183605 SNAPC4Q5SXM2 1469 aa13.04□□□□□ -0.32
CLDN18-201ENST00000183605 ZMYND15Q9H091 742 aa13.04□□□□□ -0.32
CLDN18-201ENST00000183605 POGKQ9P215 609 aa13.04□□□□□ -0.32
CLDN18-201ENST00000183605 MAP3K1Q13233 1512 aa13.03□□□□□ -0.32
CLDN18-201ENST00000183605 CC2D1BQ5T0F9 858 aaKnown RBP13.03□□□□□ -0.32
CLDN18-201ENST00000183605 DCAF11Q8TEB1 546 aa13.03□□□□□ -0.32
CLDN18-201ENST00000183605 AQRO60306 1485 aaKnown RBP eCLIP13.03□□□□□ -0.32
CLDN18-201ENST00000183605 RALBP1Q15311 655 aa13.02□□□□□ -0.32
CLDN18-201ENST00000183605 MYBBP1AQ9BQG0 1328 aaKnown RBP13.02□□□□□ -0.32
CLDN18-201ENST00000183605 NCOA2Q15596 1464 aa13.02□□□□□ -0.32
CLDN18-201ENST00000183605 TRIM44Q96DX7 344 aaPredicted RBP13.02□□□□□ -0.32
CLDN18-201ENST00000183605 GOLGA6L3A6NEY3 463 aa13.01□□□□□ -0.33
CLDN18-201ENST00000183605 CENPQQ7L2Z9 268 aaPredicted RBP13.01□□□□□ -0.33
CLDN18-201ENST00000183605 USP47Q96K76 1375 aa13.01□□□□□ -0.33
CLDN18-201ENST00000183605 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.01□□□□□ -0.33
CLDN18-201ENST00000183605 PTPRKQ15262 1439 aa13.01□□□□□ -0.33
CLDN18-201ENST00000183605 GAPVD1Q14C86 1478 aa13.01□□□□□ -0.33
CLDN18-201ENST00000183605 NLRP13Q86W25 1043 aa13□□□□□ -0.33
CLDN18-201ENST00000183605 RAD54L2Q9Y4B4 1467 aa13□□□□□ -0.33
CLDN18-201ENST00000183605 ZNF777Q9ULD5 760 aaPredicted RBP13□□□□□ -0.33
CLDN18-201ENST00000183605 GRIN2AQ12879 1464 aa13□□□□□ -0.33
CLDN18-201ENST00000183605 KIF15Q9NS87 1388 aa13□□□□□ -0.33
CLDN18-201ENST00000183605 WDR43Q15061 677 aaKnown RBP eCLIP12.99□□□□□ -0.33
CLDN18-201ENST00000183605 KTN1Q86UP2 1357 aaKnown RBP12.98□□□□□ -0.33
CLDN18-201ENST00000183605 ST20-MTHFSA0A0A6YYL1 179 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms