RNA–Protein interactions for RNA: ENST00000175756.9

PTPN18-201, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN18, Length 3,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-201ENST00000175756 TSPY10P0CW01 314 aa22.9■■□□□ 1.26
PTPN18-201ENST00000175756 CNTLNQ9NXG0 1405 aa22.9■■□□□ 1.26
PTPN18-201ENST00000175756 PAK3O75914 559 aaPredicted RBP22.89■■□□□ 1.26
PTPN18-201ENST00000175756 CC2D1BQ5T0F9 858 aaKnown RBP22.87■■□□□ 1.25
PTPN18-201ENST00000175756 MAP3K1Q13233 1512 aa22.87■■□□□ 1.25
PTPN18-201ENST00000175756 AKNAQ7Z591 1439 aa22.85■■□□□ 1.25
PTPN18-201ENST00000175756 POLA1P09884 1462 aaPredicted RBP22.84■■□□□ 1.25
PTPN18-201ENST00000175756 CHMP7Q8WUX9 453 aaPredicted RBP22.84■■□□□ 1.25
PTPN18-201ENST00000175756 ST20-MTHFSA0A0A6YYL1 179 aa22.81■■□□□ 1.24
PTPN18-201ENST00000175756 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.79■■□□□ 1.246e-6■□□□□ 11
PTPN18-201ENST00000175756 NEFMP07197 916 aa22.78■■□□□ 1.24
PTPN18-201ENST00000175756 EXOC6Q8TAG9 804 aa22.78■■□□□ 1.24
PTPN18-201ENST00000175756 IPO9Q96P70 1041 aaKnown RBP22.78■■□□□ 1.24
PTPN18-201ENST00000175756 GAPVD1Q14C86 1478 aa22.78■■□□□ 1.24
PTPN18-201ENST00000175756 PLIN1O60240 522 aa22.76■■□□□ 1.23
PTPN18-201ENST00000175756 USP47Q96K76 1375 aa22.76■■□□□ 1.23
PTPN18-201ENST00000175756 PLEKHD1A6NEE1 506 aa22.76■■□□□ 1.23
PTPN18-201ENST00000175756 TOPBP1Q92547 1522 aa22.75■■□□□ 1.23
PTPN18-201ENST00000175756 RCAN3Q9UKA8 241 aa22.75■■□□□ 1.23
PTPN18-201ENST00000175756 NUP155O75694 1391 aa22.74■■□□□ 1.23
PTPN18-201ENST00000175756 PTPN23Q9H3S7 1636 aa22.71■■□□□ 1.23
PTPN18-201ENST00000175756 EFCAB5A4FU69 1503 aa22.71■■□□□ 1.23
PTPN18-201ENST00000175756 PDS5BQ9NTI5 1447 aa22.66■■□□□ 1.22
PTPN18-201ENST00000175756 WDR43Q15061 677 aaKnown RBP eCLIP22.66■■□□□ 1.22
PTPN18-201ENST00000175756 RGS3P49796 1198 aa22.66■■□□□ 1.22
PTPN18-201ENST00000175756 CANXP27824 592 aaKnown RBP22.65■■□□□ 1.22
PTPN18-201ENST00000175756 HNRNPMP52272 730 aaKnown RBP eCLIP22.65■■□□□ 1.222e-8■■■■■ 35.4
PTPN18-201ENST00000175756 CDK13Q14004 1512 aaKnown RBP22.64■■□□□ 1.21
PTPN18-201ENST00000175756 ABCA10Q8WWZ4 1543 aa22.64■■□□□ 1.21
PTPN18-201ENST00000175756 CDCA7LQ96GN5 454 aa22.62■■□□□ 1.21
PTPN18-201ENST00000175756 SLC4A3P48751 1232 aa22.62■■□□□ 1.21
PTPN18-201ENST00000175756 RRP1P56182 461 aaKnown RBP22.62■■□□□ 1.21
PTPN18-201ENST00000175756 SKAP1Q86WV1 359 aa22.62■■□□□ 1.21
PTPN18-201ENST00000175756 PNISRQ8TF01 805 aaKnown RBP22.62■■□□□ 1.21
PTPN18-201ENST00000175756 ROCK2O75116 1388 aaKnown RBP22.61■■□□□ 1.21
PTPN18-201ENST00000175756 PDE4AP27815 886 aa22.6■■□□□ 1.21
PTPN18-201ENST00000175756 NCOA1Q15788 1441 aa22.6■■□□□ 1.21
PTPN18-201ENST00000175756 ANKRD30BQ9BXX2 1392 aa22.59■■□□□ 1.21
PTPN18-201ENST00000175756 ARXQ96QS3 562 aa22.58■■□□□ 1.21
PTPN18-201ENST00000175756 EIF5BO60841 1220 aaKnown RBP22.57■■□□□ 1.2
PTPN18-201ENST00000175756 RALBP1Q15311 655 aa22.56■■□□□ 1.2
PTPN18-201ENST00000175756 MYBBP1AQ9BQG0 1328 aaKnown RBP22.56■■□□□ 1.2
PTPN18-201ENST00000175756 EHBP1L1Q8N3D4 1523 aa22.56■■□□□ 1.2
PTPN18-201ENST00000175756 SUPT6HQ7KZ85 1726 aaKnown RBP22.56■■□□□ 1.2
PTPN18-201ENST00000175756 DNMBPQ6XZF7 1577 aa22.56■■□□□ 1.2
PTPN18-201ENST00000175756 CFAP43Q8NDM7 1665 aa22.56■■□□□ 1.2
PTPN18-201ENST00000175756 ANKRD30AQ9BXX3 1397 aa22.55■■□□□ 1.2
PTPN18-201ENST00000175756 NLRP13Q86W25 1043 aa22.55■■□□□ 1.2
PTPN18-201ENST00000175756 CC2D2AQ9P2K1 1620 aa22.55■■□□□ 1.2
PTPN18-201ENST00000175756 TCERG1O14776 1098 aaKnown RBP22.55■■□□□ 1.2
PTPN18-201ENST00000175756 KTN1Q86UP2 1357 aaKnown RBP22.55■■□□□ 1.2
PTPN18-201ENST00000175756 KIF15Q9NS87 1388 aa22.53■■□□□ 1.2
PTPN18-201ENST00000175756 KNSTRNQ9Y448 316 aa22.53■■□□□ 1.2
PTPN18-201ENST00000175756 SNAPC4Q5SXM2 1469 aa22.53■■□□□ 1.2
PTPN18-201ENST00000175756 SENP3Q9H4L4 574 aaPredicted RBP22.52■■□□□ 1.2
PTPN18-201ENST00000175756 CRBNQ96SW2 442 aa22.51■■□□□ 1.19
PTPN18-201ENST00000175756 NEUROD2Q15784 382 aa22.51■■□□□ 1.19
PTPN18-201ENST00000175756 EPRSP07814 1512 aaKnown RBP22.5■■□□□ 1.19
PTPN18-201ENST00000175756 SMG6Q86US8 1419 aaKnown RBP22.5■■□□□ 1.19
PTPN18-201ENST00000175756 PANK3Q9H999 370 aa22.5■■□□□ 1.19
PTPN18-201ENST00000175756 DAPK1P53355 1430 aa22.49■■□□□ 1.19
PTPN18-201ENST00000175756 NBPF1Q3BBV0 1214 aa22.48■■□□□ 1.19
PTPN18-201ENST00000175756 PPM1GO15355 546 aaPredicted RBP22.47■■□□□ 1.19
PTPN18-201ENST00000175756 CHGAP10645 457 aaKnown RBP22.47■■□□□ 1.19
PTPN18-201ENST00000175756 PRG4Q92954 1404 aaPredicted RBP22.47■■□□□ 1.19
PTPN18-201ENST00000175756 GRIN2BQ13224 1484 aa22.46■■□□□ 1.19
PTPN18-201ENST00000175756 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.46■■□□□ 1.19
PTPN18-201ENST00000175756 PRDM2Q13029 1718 aa22.45■■□□□ 1.18
PTPN18-201ENST00000175756 TNNT2P45379 298 aaPredicted RBP22.45■■□□□ 1.18
PTPN18-201ENST00000175756 DDRGK1Q96HY6 314 aa22.45■■□□□ 1.18
PTPN18-201ENST00000175756 CCDC146Q8IYE0 955 aa22.44■■□□□ 1.18
PTPN18-201ENST00000175756 ABCC5O15440 1437 aa22.44■■□□□ 1.18
PTPN18-201ENST00000175756 MIA2Q96PC5 1412 aa22.44■■□□□ 1.18
PTPN18-201ENST00000175756 TMF1P82094 1093 aa22.44■■□□□ 1.18
PTPN18-201ENST00000175756 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.44■■□□□ 1.18
PTPN18-201ENST00000175756 URB2Q14146 1524 aaKnown RBP22.44■■□□□ 1.18
PTPN18-201ENST00000175756 RPRD2Q5VT52 1461 aaKnown RBP22.43■■□□□ 1.18
PTPN18-201ENST00000175756 JPH4Q96JJ6 628 aa22.43■■□□□ 1.18
PTPN18-201ENST00000175756 IL27Q8NEV9 243 aa22.42■■□□□ 1.18
PTPN18-201ENST00000175756 ANKRD50Q9ULJ7 1429 aa22.41■■□□□ 1.18
PTPN18-201ENST00000175756 FRAT1Q92837 279 aaPredicted RBP22.39■■□□□ 1.18
PTPN18-201ENST00000175756 UGGT2Q9NYU1 1516 aa22.39■■□□□ 1.17
PTPN18-201ENST00000175756 CUL7Q14999 1698 aa22.38■■□□□ 1.17
PTPN18-201ENST00000175756 KIAA1107Q9UPP5 1409 aa22.37■■□□□ 1.17
PTPN18-201ENST00000175756 PDE3BQ13370 1112 aa22.36■■□□□ 1.17
PTPN18-201ENST00000175756 THOC2Q8NI27 1593 aaKnown RBP22.36■■□□□ 1.17
PTPN18-201ENST00000175756 KDM6BO15054 1643 aa22.36■■□□□ 1.17
PTPN18-201ENST00000175756 MAGI3Q5TCQ9 1506 aa22.35■■□□□ 1.17
PTPN18-201ENST00000175756 ADAMTS8Q9UP79 889 aa22.33■■□□□ 1.17
PTPN18-201ENST00000175756 BRD4O60885 1362 aaPredicted RBP22.32■■□□□ 1.16
PTPN18-201ENST00000175756 BACH2Q9BYV9 841 aa22.32■■□□□ 1.16
PTPN18-201ENST00000175756 HECW1Q76N89 1606 aa22.32■■□□□ 1.16
PTPN18-201ENST00000175756 C20orf194Q5TEA3 1177 aa22.31■■□□□ 1.16
PTPN18-201ENST00000175756 DHX29Q7Z478 1369 aaKnown RBP22.3■■□□□ 1.16
PTPN18-201ENST00000175756 ROCK1Q13464 1354 aa22.3■■□□□ 1.16
PTPN18-201ENST00000175756 ANO8Q9HCE9 1232 aaPredicted RBP22.29■■□□□ 1.16
PTPN18-201ENST00000175756 CTTNBP2Q8WZ74 1663 aa22.29■■□□□ 1.16
PTPN18-201ENST00000175756 ARID4BQ4LE39 1312 aaPredicted RBP22.29■■□□□ 1.16
PTPN18-201ENST00000175756 CCDC144AA2RUR9 1427 aa22.28■■□□□ 1.16
PTPN18-201ENST00000175756 GOLGA2Q08379 1002 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms