RNA–Protein interactions for RNA: ENSMUST00000132214.7

Ccdc38-203, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc38, Length 2,222 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-203ENSMUST00000132214 Neurod1Q60867 357 aa9.89□□□□□ -0.83
Ccdc38-203ENSMUST00000132214 Ndufv2Q9D6J6 248 aa9.88□□□□□ -0.83
Ccdc38-203ENSMUST00000132214 Speer2E9Q9U2 264 aa9.86□□□□□ -0.83
Ccdc38-203ENSMUST00000132214 Erich4Q3UNU4 136 aa9.86□□□□□ -0.83
Ccdc38-203ENSMUST00000132214 IncenpQ9WU62 880 aa9.84□□□□□ -0.83
Ccdc38-203ENSMUST00000132214 Aplp2Q06335 707 aa9.83□□□□□ -0.84
Ccdc38-203ENSMUST00000132214 Unc13aQ4KUS2 1712 aa9.82□□□□□ -0.84
Ccdc38-203ENSMUST00000132214 Slc4a5E9Q3M5 1116 aa9.82□□□□□ -0.84
Ccdc38-203ENSMUST00000132214 Pelp1Q9DBD5 1123 aaKnown RBP9.79□□□□□ -0.84
Ccdc38-203ENSMUST00000132214 Znf330Q922H9 316 aa9.78□□□□□ -0.84
Ccdc38-203ENSMUST00000132214 Rsf1E9PWW9 1441 aaKnown RBP9.76□□□□□ -0.85
Ccdc38-203ENSMUST00000132214 Ccdc136Q3TVA9 1136 aa9.75□□□□□ -0.85
Ccdc38-203ENSMUST00000132214 Lrriq1Q0P5X1 1673 aa9.74□□□□□ -0.85
Ccdc38-203ENSMUST00000132214 Irf6P97431 467 aa9.74□□□□□ -0.85
Ccdc38-203ENSMUST00000132214 Tor1aip2Q8BYU6 502 aa9.73□□□□□ -0.85
Ccdc38-203ENSMUST00000132214 Anks4bQ8K3X6 423 aa9.73□□□□□ -0.85
Ccdc38-203ENSMUST00000132214 Pcdhb20Q91XZ9 799 aa9.73□□□□□ -0.85
Ccdc38-203ENSMUST00000132214 CftrP26361 1476 aa9.73□□□□□ -0.85
Ccdc38-203ENSMUST00000132214 Mink1Q9JM52 1308 aa9.73□□□□□ -0.85
Ccdc38-203ENSMUST00000132214 Cttnbp2B9EJA2 1648 aa9.72□□□□□ -0.85
Ccdc38-203ENSMUST00000132214 Rasgrp4Q8BTM9 673 aa9.72□□□□□ -0.85
Ccdc38-203ENSMUST00000132214 Pdzrn4E9PUZ9 1014 aa9.71□□□□□ -0.86
Ccdc38-203ENSMUST00000132214 Sptlc1O35704 473 aa9.7□□□□□ -0.86
Ccdc38-203ENSMUST00000132214 Bcl11bQ99PV8 884 aa9.7□□□□□ -0.86
Ccdc38-203ENSMUST00000132214 Pknox2Q8BG99 474 aa9.69□□□□□ -0.86
Ccdc38-203ENSMUST00000132214 Q8BT18 775 aa9.69□□□□□ -0.86
Ccdc38-203ENSMUST00000132214 Shroom2A2ALU4 1481 aa9.69□□□□□ -0.86
Ccdc38-203ENSMUST00000132214 Cngb1E1AZ71 1325 aa9.69□□□□□ -0.86
Ccdc38-203ENSMUST00000132214 Neurod2Q62414 383 aa9.68□□□□□ -0.86
Ccdc38-203ENSMUST00000132214 NrdcQ8BHG1 1161 aa9.68□□□□□ -0.86
Ccdc38-203ENSMUST00000132214 Cacnb1Q8R3Z5 597 aa9.68□□□□□ -0.86
Ccdc38-203ENSMUST00000132214 Cux2P70298 1426 aa9.67□□□□□ -0.86
Ccdc38-203ENSMUST00000132214 SnphQ80U23 495 aa9.67□□□□□ -0.86
Ccdc38-203ENSMUST00000132214 BccipQ9CWI3 316 aa9.67□□□□□ -0.86
Ccdc38-203ENSMUST00000132214 NclP09405 707 aaKnown RBP9.67□□□□□ -0.86
Ccdc38-203ENSMUST00000132214 Bclaf1Q8K019 919 aaKnown RBP9.67□□□□□ -0.86
Ccdc38-203ENSMUST00000132214 Synj1Q8CHC4 1574 aa9.66□□□□□ -0.86
Ccdc38-203ENSMUST00000132214 OsbpQ3B7Z2 805 aa9.66□□□□□ -0.86
Ccdc38-203ENSMUST00000132214 Brd4Q9ESU6 1400 aaKnown RBP9.66□□□□□ -0.86
Ccdc38-203ENSMUST00000132214 Fgd1P52734 960 aa9.65□□□□□ -0.86
Ccdc38-203ENSMUST00000132214 Tulp1Q9Z273 543 aa9.65□□□□□ -0.86
Ccdc38-203ENSMUST00000132214 Tox2A2A472 547 aa9.64□□□□□ -0.87
Ccdc38-203ENSMUST00000132214 Irx6Q9ER75 438 aa9.64□□□□□ -0.87
Ccdc38-203ENSMUST00000132214 Prim1P20664 417 aa9.64□□□□□ -0.87
Ccdc38-203ENSMUST00000132214 Znf579Q80VM4 562 aa9.64□□□□□ -0.87
Ccdc38-203ENSMUST00000132214 Gtf3c5Q8R2T8 520 aa9.64□□□□□ -0.87
Ccdc38-203ENSMUST00000132214 Prr7Q3V0I2 269 aa9.63□□□□□ -0.87
Ccdc38-203ENSMUST00000132214 Tpcn2Q8BWC0 731 aa9.63□□□□□ -0.87
Ccdc38-203ENSMUST00000132214 Gimap6Q8K349 305 aa9.63□□□□□ -0.87
Ccdc38-203ENSMUST00000132214 Eif4g3Q80XI3 1579 aaKnown RBP9.63□□□□□ -0.87
Ccdc38-203ENSMUST00000132214 Kif15Q6P9L6 1387 aa9.63□□□□□ -0.87
Ccdc38-203ENSMUST00000132214 Kif21aQ9QXL2 1672 aa9.62□□□□□ -0.87
Ccdc38-203ENSMUST00000132214 GopcQ8BH60 463 aa9.62□□□□□ -0.87
Ccdc38-203ENSMUST00000132214 Cdk11bP24788 784 aaKnown RBP9.61□□□□□ -0.87
Ccdc38-203ENSMUST00000132214 Gm13695A2AK44 830 aa9.59□□□□□ -0.87
Ccdc38-203ENSMUST00000132214 Gpr37Q9QY42 600 aa9.59□□□□□ -0.87
Ccdc38-203ENSMUST00000132214 Col17a1Q07563 1470 aa9.59□□□□□ -0.87
Ccdc38-203ENSMUST00000132214 Znf516Q7TSH3 1157 aa9.58□□□□□ -0.88
Ccdc38-203ENSMUST00000132214 Kcnv2Q8CFS6 562 aa9.58□□□□□ -0.88
Ccdc38-203ENSMUST00000132214 Plcd4Q8K3R3 807 aa9.57□□□□□ -0.88
Ccdc38-203ENSMUST00000132214 Pdia6Q922R8 440 aaKnown RBP9.56□□□□□ -0.88
Ccdc38-203ENSMUST00000132214 Pabpn1Q8CCS6 302 aaKnown RBP9.55□□□□□ -0.88
Ccdc38-203ENSMUST00000132214 Kank3Q9Z1P7 791 aa9.55□□□□□ -0.88
Ccdc38-203ENSMUST00000132214 Supt5hO55201 1082 aaKnown RBP9.54□□□□□ -0.88
Ccdc38-203ENSMUST00000132214 Csrnp3P59055 597 aa9.54□□□□□ -0.88
Ccdc38-203ENSMUST00000132214 XpcP51612 930 aa9.54□□□□□ -0.88
Ccdc38-203ENSMUST00000132214 Pcmtd1P59913 357 aa9.53□□□□□ -0.88
Ccdc38-203ENSMUST00000132214 Cep164Q5DU05 1446 aa9.53□□□□□ -0.88
Ccdc38-203ENSMUST00000132214 Top2bQ64511 1612 aa9.52□□□□□ -0.89
Ccdc38-203ENSMUST00000132214 Lrrc14bQ3UJB3 510 aa9.52□□□□□ -0.89
Ccdc38-203ENSMUST00000132214 Prom2Q3UUY6 835 aa9.52□□□□□ -0.89
Ccdc38-203ENSMUST00000132214 ZyxQ62523 564 aa9.51□□□□□ -0.89
Ccdc38-203ENSMUST00000132214 Secisbp2lQ6A098 1086 aaKnown RBP9.5□□□□□ -0.89
Ccdc38-203ENSMUST00000132214 Lamc3Q9R0B6 1581 aa9.5□□□□□ -0.89
Ccdc38-203ENSMUST00000132214 Urb2E9Q7L1 1524 aaKnown RBP9.5□□□□□ -0.89
Ccdc38-203ENSMUST00000132214 Slc12a5Q91V14 1138 aa9.48□□□□□ -0.89
Ccdc38-203ENSMUST00000132214 Fkbp4P30416 458 aa9.48□□□□□ -0.89
Ccdc38-203ENSMUST00000132214 Irf5P56477 497 aa9.48□□□□□ -0.89
Ccdc38-203ENSMUST00000132214 HrcG5E8J6 738 aa9.47□□□□□ -0.89
Ccdc38-203ENSMUST00000132214 Fnbp4Q6ZQ03 1031 aa9.47□□□□□ -0.89
Ccdc38-203ENSMUST00000132214 Plb1Q3TTY0 1478 aa9.46□□□□□ -0.89
Ccdc38-203ENSMUST00000132214 Map2k5Q9WVS7 448 aa9.46□□□□□ -0.89
Ccdc38-203ENSMUST00000132214 Eya1P97767 591 aa9.46□□□□□ -0.9
Ccdc38-203ENSMUST00000132214 Ffar3Q3UFD7 319 aa9.46□□□□□ -0.9
Ccdc38-203ENSMUST00000132214 Dhx29Q6PGC1 1365 aaKnown RBP9.45□□□□□ -0.9
Ccdc38-203ENSMUST00000132214 Ppfia1B2RXQ2 1266 aa9.45□□□□□ -0.9
Ccdc38-203ENSMUST00000132214 Uri1Q3TLD5 531 aa9.45□□□□□ -0.9
Ccdc38-203ENSMUST00000132214 Kank4Q6P9J5 1016 aa9.45□□□□□ -0.9
Ccdc38-203ENSMUST00000132214 Pip4p2Q9CZX7 257 aa9.45□□□□□ -0.9
Ccdc38-203ENSMUST00000132214 Znf316Q6PGE4 1016 aa9.44□□□□□ -0.9
Ccdc38-203ENSMUST00000132214 Zcchc11B2RX14 1644 aaKnown RBP9.44□□□□□ -0.9
Ccdc38-203ENSMUST00000132214 Evi5P97366 809 aa9.43□□□□□ -0.9
Ccdc38-203ENSMUST00000132214 Otop3Q80UF9 577 aa9.43□□□□□ -0.9
Ccdc38-203ENSMUST00000132214 OscarQ8VBT3 265 aa9.43□□□□□ -0.9
Ccdc38-203ENSMUST00000132214 Ccdc18Q640L5 1455 aa9.42□□□□□ -0.9
Ccdc38-203ENSMUST00000132214 Rusc2Q80U22 1514 aa9.4□□□□□ -0.9
Ccdc38-203ENSMUST00000132214 Dok7Q18PE0 504 aa9.4□□□□□ -0.9
Ccdc38-203ENSMUST00000132214 Ppfibp2O35711 882 aa9.4□□□□□ -0.91
Ccdc38-203ENSMUST00000132214 NppbP40753 121 aa9.4□□□□□ -0.91
Ccdc38-203ENSMUST00000132214 Ccdc102aQ3TMW1 549 aa9.4□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms