RNA–Protein interactions for RNA: ENSMUST00000112523.7

Clstn3-202, Transcript of Calsyntenin-3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Clstn3, Length 3,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clstn3-202ENSMUST00000112523 Clstn2Q9ER65 966 aa12.95□□□□□ -0.34
Clstn3-202ENSMUST00000112523 Slx4Q6P1D7 1565 aa12.95□□□□□ -0.34
Clstn3-202ENSMUST00000112523 ClspnQ80YR7 1315 aa12.95□□□□□ -0.34
Clstn3-202ENSMUST00000112523 Polr1aO35134 1717 aaKnown RBP12.95□□□□□ -0.34
Clstn3-202ENSMUST00000112523 Ncoa3O09000 1398 aa12.93□□□□□ -0.34
Clstn3-202ENSMUST00000112523 Mia2Q91ZV0 1396 aa12.92□□□□□ -0.34
Clstn3-202ENSMUST00000112523 Tiam1Q60610 1591 aa12.92□□□□□ -0.34
Clstn3-202ENSMUST00000112523 Ifit1bl1D3Z6F0 470 aa12.92□□□□□ -0.34
Clstn3-202ENSMUST00000112523 Cnga1P29974 684 aa12.92□□□□□ -0.34
Clstn3-202ENSMUST00000112523 Mug1P28665 1476 aa12.91□□□□□ -0.34
Clstn3-202ENSMUST00000112523 Nup155Q99P88 1391 aaKnown RBP12.91□□□□□ -0.34
Clstn3-202ENSMUST00000112523 Stk26Q99JT2 416 aa12.91□□□□□ -0.34
Clstn3-202ENSMUST00000112523 Ccdc141E9Q8Q6 1531 aa12.91□□□□□ -0.34
Clstn3-202ENSMUST00000112523 Nup160Q9Z0W3 1402 aaKnown RBP12.91□□□□□ -0.34
Clstn3-202ENSMUST00000112523 NexmifQ5DTT1 1515 aa12.91□□□□□ -0.34
Clstn3-202ENSMUST00000112523 Dhx57Q6P5D3 1388 aaKnown RBP12.9□□□□□ -0.34
Clstn3-202ENSMUST00000112523 Shroom2A2ALU4 1481 aa12.88□□□□□ -0.35
Clstn3-202ENSMUST00000112523 Spag9Q58A65 1321 aaKnown RBP12.88□□□□□ -0.35
Clstn3-202ENSMUST00000112523 Arhgap5P97393 1501 aa12.88□□□□□ -0.35
Clstn3-202ENSMUST00000112523 NrdcQ8BHG1 1161 aa12.87□□□□□ -0.35
Clstn3-202ENSMUST00000112523 NgefQ8CHT1 710 aa12.87□□□□□ -0.35
Clstn3-202ENSMUST00000112523 BC005561E9Q5E2 1589 aa12.87□□□□□ -0.35
Clstn3-202ENSMUST00000112523 Ncoa2Q61026 1462 aa12.86□□□□□ -0.35
Clstn3-202ENSMUST00000112523 Gm20521D3Z5F7 333 aa12.86□□□□□ -0.35
Clstn3-202ENSMUST00000112523 3425401B19RikD3Z1D3 1412 aa12.85□□□□□ -0.35
Clstn3-202ENSMUST00000112523 Card11Q8CIS0 1159 aa12.85□□□□□ -0.35
Clstn3-202ENSMUST00000112523 Gm1043A0A140LJC2 1431 aa12.85□□□□□ -0.35
Clstn3-202ENSMUST00000112523 Magi1Q6RHR9 1471 aa12.84□□□□□ -0.35
Clstn3-202ENSMUST00000112523 Rangap1P46061 589 aaKnown RBP12.83□□□□□ -0.36
Clstn3-202ENSMUST00000112523 Arid4bA2CG63 1314 aaKnown RBP12.83□□□□□ -0.36
Clstn3-202ENSMUST00000112523 Rundc1Q0VDN7 615 aa12.83□□□□□ -0.36
Clstn3-202ENSMUST00000112523 Ttll5Q8CHB8 1328 aa12.83□□□□□ -0.36
Clstn3-202ENSMUST00000112523 Srpk2O54781 681 aaKnown RBP12.83□□□□□ -0.36
Clstn3-202ENSMUST00000112523 Afap1Q80YS6 731 aa12.83□□□□□ -0.36
Clstn3-202ENSMUST00000112523 Fam163aQ8CAA5 168 aa12.83□□□□□ -0.36
Clstn3-202ENSMUST00000112523 Ncapd3Q6ZQK0 1506 aa12.82□□□□□ -0.36
Clstn3-202ENSMUST00000112523 Abcc1O35379 1528 aa12.82□□□□□ -0.36
Clstn3-202ENSMUST00000112523 Atp10dQ8K2X1 1416 aa12.81□□□□□ -0.36
Clstn3-202ENSMUST00000112523 Znf316Q6PGE4 1016 aa12.81□□□□□ -0.36
Clstn3-202ENSMUST00000112523 A2mQ6GQT1 1474 aa12.81□□□□□ -0.36
Clstn3-202ENSMUST00000112523 Dhx9O70133 1380 aaKnown RBP12.81□□□□□ -0.36
Clstn3-202ENSMUST00000112523 Rusc2Q80U22 1514 aa12.8□□□□□ -0.36
Clstn3-202ENSMUST00000112523 Trappc8E9PWG2 1437 aa12.8□□□□□ -0.36
Clstn3-202ENSMUST00000112523 Pde4cQ3UEI1 686 aa12.8□□□□□ -0.36
Clstn3-202ENSMUST00000112523 Usp47Q8BY87 1376 aa12.8□□□□□ -0.36
Clstn3-202ENSMUST00000112523 Prex2Q3LAC4 1598 aa12.8□□□□□ -0.36
Clstn3-202ENSMUST00000112523 Fan1Q69ZT1 1020 aa12.79□□□□□ -0.36
Clstn3-202ENSMUST00000112523 Gapvd1Q6PAR5 1458 aa12.79□□□□□ -0.36
Clstn3-202ENSMUST00000112523 Abcc5Q9R1X5 1436 aa12.79□□□□□ -0.36
Clstn3-202ENSMUST00000112523 Txndc2Q6P902 515 aa12.78□□□□□ -0.36
Clstn3-202ENSMUST00000112523 Sall3Q62255 1320 aa12.78□□□□□ -0.36
Clstn3-202ENSMUST00000112523 Znf608Q56A10 1511 aa12.77□□□□□ -0.36
Clstn3-202ENSMUST00000112523 Mrs2Q5NCE8 434 aa12.77□□□□□ -0.37
Clstn3-202ENSMUST00000112523 Eif4g3Q80XI3 1579 aaKnown RBP12.76□□□□□ -0.37
Clstn3-202ENSMUST00000112523 Rad21Q61550 635 aaKnown RBP12.75□□□□□ -0.37
Clstn3-202ENSMUST00000112523 Stag3O70576 1240 aa12.75□□□□□ -0.37
Clstn3-202ENSMUST00000112523 Wwc2Q6NXJ0 1187 aa12.74□□□□□ -0.37
Clstn3-202ENSMUST00000112523 UacaQ8CGB3 1411 aa12.74□□□□□ -0.37
Clstn3-202ENSMUST00000112523 Gm38655A0A286YDK6 273 aa12.74□□□□□ -0.37
Clstn3-202ENSMUST00000112523 Anp32bQ9EST5 272 aaKnown RBP12.73□□□□□ -0.37
Clstn3-202ENSMUST00000112523 Eif4g1Q6NZJ6 1600 aaKnown RBP12.72□□□□□ -0.37
Clstn3-202ENSMUST00000112523 Sox12Q04890 314 aa12.72□□□□□ -0.37
Clstn3-202ENSMUST00000112523 Arhgef40Q3UPH7 1517 aa12.71□□□□□ -0.37
Clstn3-202ENSMUST00000112523 Nlrp6Q91WS2 869 aa12.71□□□□□ -0.37
Clstn3-202ENSMUST00000112523 Arhgef12Q8R4H2 1543 aaKnown RBP12.7□□□□□ -0.38
Clstn3-202ENSMUST00000112523 Pip4k2bQ80XI4 416 aa12.69□□□□□ -0.38
Clstn3-202ENSMUST00000112523 Naip2Q9QUK4 1447 aa12.69□□□□□ -0.38
Clstn3-202ENSMUST00000112523 Psme1P97371 249 aa12.69□□□□□ -0.38
Clstn3-202ENSMUST00000112523 Fhad1A6PWD2 1420 aa12.68□□□□□ -0.38
Clstn3-202ENSMUST00000112523 Exosc9Q9JHI7 438 aaKnown RBP12.68□□□□□ -0.38
Clstn3-202ENSMUST00000112523 Abca16E9PWJ7 1678 aa12.68□□□□□ -0.38
Clstn3-202ENSMUST00000112523 Rapgef6Q5NCJ1 1609 aa12.68□□□□□ -0.38
Clstn3-202ENSMUST00000112523 Adamts12Q811B3 1600 aa12.67□□□□□ -0.38
Clstn3-202ENSMUST00000112523 Igf1rQ60751 1373 aa12.67□□□□□ -0.38
Clstn3-202ENSMUST00000112523 Polr3glQ8R0C0 218 aa12.66□□□□□ -0.38
Clstn3-202ENSMUST00000112523 PtprtQ99M80 1454 aa12.66□□□□□ -0.38
Clstn3-202ENSMUST00000112523 Shq1Q7TMX5 569 aa12.66□□□□□ -0.38
Clstn3-202ENSMUST00000112523 Fancd2Q80V62 1450 aa12.66□□□□□ -0.38
Clstn3-202ENSMUST00000112523 Abcc2Q8VI47 1543 aa12.66□□□□□ -0.38
Clstn3-202ENSMUST00000112523 Stra8P70278 393 aa12.65□□□□□ -0.38
Clstn3-202ENSMUST00000112523 Q9D9H8 365 aa12.65□□□□□ -0.38
Clstn3-202ENSMUST00000112523 Senp3Q9EP97 568 aaKnown RBP12.65□□□□□ -0.38
Clstn3-202ENSMUST00000112523 Plin1Q8CGN5 517 aa12.65□□□□□ -0.38
Clstn3-202ENSMUST00000112523 Csrnp3P59055 597 aa12.64□□□□□ -0.39
Clstn3-202ENSMUST00000112523 IqubQ8CDK3 788 aa12.64□□□□□ -0.39
Clstn3-202ENSMUST00000112523 Cd109Q8R422 1442 aa12.64□□□□□ -0.39
Clstn3-202ENSMUST00000112523 Vps8Q0P5W1 1427 aa12.63□□□□□ -0.39
Clstn3-202ENSMUST00000112523 Utp14aQ640M1 767 aaKnown RBP12.63□□□□□ -0.39
Clstn3-202ENSMUST00000112523 Adgrb2Q8CGM1 1561 aa12.63□□□□□ -0.39
Clstn3-202ENSMUST00000112523 Abca5Q8K448 1642 aa12.61□□□□□ -0.39
Clstn3-202ENSMUST00000112523 Pcdh10E9PXQ7 1057 aa12.61□□□□□ -0.39
Clstn3-202ENSMUST00000112523 Srcin1Q9QWI6 1250 aa12.61□□□□□ -0.39
Clstn3-202ENSMUST00000112523 Dnajc5gQ8C632 165 aa12.61□□□□□ -0.39
Clstn3-202ENSMUST00000112523 Lmo7E9PYF4 1699 aaKnown RBP12.61□□□□□ -0.39
Clstn3-202ENSMUST00000112523 Mink1Q9JM52 1308 aa12.6□□□□□ -0.39
Clstn3-202ENSMUST00000112523 Trim26Q99PN3 545 aa12.6□□□□□ -0.39
Clstn3-202ENSMUST00000112523 Irx6Q9ER75 438 aa12.6□□□□□ -0.39
Clstn3-202ENSMUST00000112523 Setd1bQ8CFT2 1985 aa12.6□□□□□ -0.39
Clstn3-202ENSMUST00000112523 Gtf2e1Q9D0D5 440 aa12.59□□□□□ -0.39
Clstn3-202ENSMUST00000112523 Slc4a1apE9PX68 744 aa12.59□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 12.1 ms