RNA–Protein interactions for RNA: ENSMUST00000112523.7

Clstn3-202, Transcript of Calsyntenin-3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Clstn3, Length 3,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clstn3-202ENSMUST00000112523 Rhox8Q6VSS7 320 aa17.69■□□□□ 0.42
Clstn3-202ENSMUST00000112523 NischQ80TM9 1593 aa17.54■□□□□ 0.4
Clstn3-202ENSMUST00000112523 Abcc9P70170 1546 aa16.66■□□□□ 0.26
Clstn3-202ENSMUST00000112523 Abcc8B2RUS7 1588 aa16.48■□□□□ 0.23
Clstn3-202ENSMUST00000112523 Gm35339A0A140LHH9 1649 aa16.38■□□□□ 0.21
Clstn3-202ENSMUST00000112523 Ccdc136Q3TVA9 1136 aa16.32■□□□□ 0.2
Clstn3-202ENSMUST00000112523 Esf1Q3V1V3 845 aaKnown RBP15.72■□□□□ 0.11
Clstn3-202ENSMUST00000112523 Cngb1E1AZ71 1325 aa15.7■□□□□ 0.1
Clstn3-202ENSMUST00000112523 Zcchc6Q5BLK4 1491 aaKnown RBP15.68■□□□□ 0.1
Clstn3-202ENSMUST00000112523 Ehmt2Q9Z148 1263 aaKnown RBP15.54■□□□□ 0.08
Clstn3-202ENSMUST00000112523 Gab3Q8BSM5 595 aa15.47■□□□□ 0.07
Clstn3-202ENSMUST00000112523 ScribQ80U72 1612 aa15.44■□□□□ 0.06
Clstn3-202ENSMUST00000112523 Trim41Q5NCC3 630 aa15.43■□□□□ 0.06
Clstn3-202ENSMUST00000112523 Kdm5dQ62240 1548 aa15.38■□□□□ 0.05
Clstn3-202ENSMUST00000112523 Rb1cc1Q9ESK9 1588 aa15.35■□□□□ 0.05
Clstn3-202ENSMUST00000112523 NacadQ5SWP3 1504 aa15.3■□□□□ 0.04
Clstn3-202ENSMUST00000112523 Il27Q8K3I6 234 aa15.25■□□□□ 0.03
Clstn3-202ENSMUST00000112523 Myt1lP97500 1187 aa15.08■□□□□ 0.01
Clstn3-202ENSMUST00000112523 Zeb1Q64318 1117 aa15.05■□□□□ -0
Clstn3-202ENSMUST00000112523 Npm2Q80W85 207 aa15.02□□□□□ -0.01
Clstn3-202ENSMUST00000112523 Baz1aO88379 1555 aa14.96□□□□□ -0.01
Clstn3-202ENSMUST00000112523 Sycp2Q9CUU3 1500 aa14.89□□□□□ -0.03
Clstn3-202ENSMUST00000112523 Dcaf1Q80TR8 1506 aa14.85□□□□□ -0.03
Clstn3-202ENSMUST00000112523 Chic1Q8CBW7 227 aa14.83□□□□□ -0.03
Clstn3-202ENSMUST00000112523 Cecr2E9Q2Z1 1453 aa14.76□□□□□ -0.05
Clstn3-202ENSMUST00000112523 Ccdc180J3QNE4 1664 aa14.74□□□□□ -0.05
Clstn3-202ENSMUST00000112523 Ubl4bQ9CQ84 188 aa14.71□□□□□ -0.05
Clstn3-202ENSMUST00000112523 Brd4Q9ESU6 1400 aaKnown RBP14.68□□□□□ -0.06
Clstn3-202ENSMUST00000112523 Ap3b1Q9Z1T1 1105 aa14.67□□□□□ -0.06
Clstn3-202ENSMUST00000112523 Rtl1Q7M732 1744 aa14.65□□□□□ -0.06
Clstn3-202ENSMUST00000112523 Npm1Q61937 292 aaKnown RBP14.62□□□□□ -0.07
Clstn3-202ENSMUST00000112523 HrcG5E8J6 738 aa14.61□□□□□ -0.07
Clstn3-202ENSMUST00000112523 UbtfP25976 765 aaKnown RBP14.53□□□□□ -0.08
Clstn3-202ENSMUST00000112523 Dnajc5bQ9CQ94 199 aa14.51□□□□□ -0.09
Clstn3-202ENSMUST00000112523 BicraF8VPZ9 1578 aa14.49□□□□□ -0.09
Clstn3-202ENSMUST00000112523 Smarca2Q6DIC0 1577 aa14.42□□□□□ -0.1
Clstn3-202ENSMUST00000112523 Kif15Q6P9L6 1387 aa14.42□□□□□ -0.1
Clstn3-202ENSMUST00000112523 Pds5bQ4VA53 1446 aaKnown RBP14.39□□□□□ -0.11
Clstn3-202ENSMUST00000112523 Ube2uB1AUC4 352 aa14.37□□□□□ -0.11
Clstn3-202ENSMUST00000112523 Ercc6F8VPZ5 1481 aa14.36□□□□□ -0.11
Clstn3-202ENSMUST00000112523 Rsf1E9PWW9 1441 aaKnown RBP14.35□□□□□ -0.11
Clstn3-202ENSMUST00000112523 Synj1Q8CHC4 1574 aa14.35□□□□□ -0.11
Clstn3-202ENSMUST00000112523 CftrP26361 1476 aa14.35□□□□□ -0.11
Clstn3-202ENSMUST00000112523 Ifnlr1Q8CGK5 535 aa14.34□□□□□ -0.11
Clstn3-202ENSMUST00000112523 Lmod2Q3UHZ5 550 aa14.33□□□□□ -0.11
Clstn3-202ENSMUST00000112523 Ccdc88bQ4QRL3 1481 aa14.33□□□□□ -0.12
Clstn3-202ENSMUST00000112523 Plekhg3Q4VAC9 1341 aa14.32□□□□□ -0.12
Clstn3-202ENSMUST00000112523 Golga3P55937 1487 aa14.32□□□□□ -0.12
Clstn3-202ENSMUST00000112523 Crybg2B7ZCC2 1516 aa14.32□□□□□ -0.12
Clstn3-202ENSMUST00000112523 Fkbp15Q6P9Q6 1216 aaKnown RBP14.28□□□□□ -0.12
Clstn3-202ENSMUST00000112523 Atad2bE9Q166 1460 aaKnown RBP14.26□□□□□ -0.13
Clstn3-202ENSMUST00000112523 Smarca4Q3TKT4 1613 aaKnown RBP14.23□□□□□ -0.13
Clstn3-202ENSMUST00000112523 Iqgap2Q3UQ44 1575 aa14.18□□□□□ -0.14
Clstn3-202ENSMUST00000112523 Cep164Q5DU05 1446 aa14.17□□□□□ -0.14
Clstn3-202ENSMUST00000112523 Fam50aQ9WV03 339 aaKnown RBP14.15□□□□□ -0.14
Clstn3-202ENSMUST00000112523 Pelp1Q9DBD5 1123 aaKnown RBP14.12□□□□□ -0.15
Clstn3-202ENSMUST00000112523 Zbtb7cQ8VCZ7 619 aa14.1□□□□□ -0.15
Clstn3-202ENSMUST00000112523 Cux2P70298 1426 aa14.09□□□□□ -0.15
Clstn3-202ENSMUST00000112523 Phldb1Q6PDH0 1371 aaKnown RBP14.06□□□□□ -0.16
Clstn3-202ENSMUST00000112523 Ppargc1bQ8VHJ7 1014 aa14.04□□□□□ -0.16
Clstn3-202ENSMUST00000112523 Frmpd1A2AKB4 1549 aa14.01□□□□□ -0.17
Clstn3-202ENSMUST00000112523 Wdr66E9Q743 1299 aa13.99□□□□□ -0.17
Clstn3-202ENSMUST00000112523 Cttnbp2B9EJA2 1648 aa13.99□□□□□ -0.17
Clstn3-202ENSMUST00000112523 Plppr3Q7TPB0 716 aa13.99□□□□□ -0.17
Clstn3-202ENSMUST00000112523 Clip1Q922J3 1391 aa13.98□□□□□ -0.17
Clstn3-202ENSMUST00000112523 Ccdc18Q640L5 1455 aa13.97□□□□□ -0.17
Clstn3-202ENSMUST00000112523 Mier1Q5UAK0 511 aa13.94□□□□□ -0.18
Clstn3-202ENSMUST00000112523 Acin1Q9JIX8 1338 aaKnown RBP13.92□□□□□ -0.18
Clstn3-202ENSMUST00000112523 Eid3Q3V124 375 aa13.91□□□□□ -0.18
Clstn3-202ENSMUST00000112523 Arhgap27A2AB59 869 aa13.9□□□□□ -0.18
Clstn3-202ENSMUST00000112523 Fmn1Q05860 1466 aa13.89□□□□□ -0.19
Clstn3-202ENSMUST00000112523 Rpgrip1Q9EPQ2 1331 aa13.88□□□□□ -0.19
Clstn3-202ENSMUST00000112523 Cc2d2aQ8CFW7 1633 aa13.87□□□□□ -0.19
Clstn3-202ENSMUST00000112523 Neurod1Q60867 357 aa13.86□□□□□ -0.19
Clstn3-202ENSMUST00000112523 Setd5Q5XJV7 1441 aa13.84□□□□□ -0.19
Clstn3-202ENSMUST00000112523 Chic2Q9D9G3 165 aa13.83□□□□□ -0.2
Clstn3-202ENSMUST00000112523 Rapgef2Q8CHG7 1496 aa13.83□□□□□ -0.2
Clstn3-202ENSMUST00000112523 Dhx29Q6PGC1 1365 aaKnown RBP13.82□□□□□ -0.2
Clstn3-202ENSMUST00000112523 Wdr62Q3U3T8 1523 aa13.8□□□□□ -0.2
Clstn3-202ENSMUST00000112523 LrpprcQ6PB66 1392 aaKnown RBP13.79□□□□□ -0.2
Clstn3-202ENSMUST00000112523 Las1lA2BE28 776 aaKnown RBP13.78□□□□□ -0.2
Clstn3-202ENSMUST00000112523 BlmO88700 1416 aa13.78□□□□□ -0.2
Clstn3-202ENSMUST00000112523 Cep162Q6ZQ06 1403 aa13.76□□□□□ -0.21
Clstn3-202ENSMUST00000112523 Baz1bQ9Z277 1479 aa13.75□□□□□ -0.21
Clstn3-202ENSMUST00000112523 Hnrnpul2Q00PI9 745 aaKnown RBP13.75□□□□□ -0.21
Clstn3-202ENSMUST00000112523 PtprkP35822 1457 aa13.7□□□□□ -0.22
Clstn3-202ENSMUST00000112523 Rad54l2Q99NG0 1466 aa13.7□□□□□ -0.22
Clstn3-202ENSMUST00000112523 Ttbk1Q6PCN3 1308 aa13.7□□□□□ -0.22
Clstn3-202ENSMUST00000112523 AknaQ80VW7 1404 aa13.69□□□□□ -0.22
Clstn3-202ENSMUST00000112523 Zbtb4Q5F293 982 aa13.67□□□□□ -0.22
Clstn3-202ENSMUST00000112523 Slc24a1Q91WD8 1130 aa13.66□□□□□ -0.22
Clstn3-202ENSMUST00000112523 Arid3cA6PWV5 409 aa13.66□□□□□ -0.22
Clstn3-202ENSMUST00000112523 Rpap1Q80TE0 1409 aa13.65□□□□□ -0.22
Clstn3-202ENSMUST00000112523 Mapk8ip2Q9ERE9 830 aa13.64□□□□□ -0.23
Clstn3-202ENSMUST00000112523 Mrc2Q64449 1479 aa13.63□□□□□ -0.23
Clstn3-202ENSMUST00000112523 Urb2E9Q7L1 1524 aaKnown RBP13.62□□□□□ -0.23
Clstn3-202ENSMUST00000112523 Eea1Q8BL66 1411 aa13.61□□□□□ -0.23
Clstn3-202ENSMUST00000112523 Aebp1Q640N1 1128 aa13.6□□□□□ -0.23
Clstn3-202ENSMUST00000112523 Duox2A2AQ99 1517 aa13.58□□□□□ -0.24
Clstn3-202ENSMUST00000112523 NefmP08553 848 aa13.57□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 26.6 ms