RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Chaf1aQ9QWF0 911 aa22.99■■□□□ 1.27
Trim71-201ENSMUST00000111816 Apbb1Q9QXJ1 710 aa22.98■■□□□ 1.27
Trim71-201ENSMUST00000111816 AppP12023 770 aa22.97■■□□□ 1.27
Trim71-201ENSMUST00000111816 Iffo2Q8R2V2 512 aa22.96■■□□□ 1.27
Trim71-201ENSMUST00000111816 Brd4Q9ESU6 1400 aaKnown RBP22.96■■□□□ 1.27
Trim71-201ENSMUST00000111816 Fam43aQ8BUP8 424 aa22.95■■□□□ 1.27
Trim71-201ENSMUST00000111816 Gpatch11Q3UFS4 262 aa22.95■■□□□ 1.26
Trim71-201ENSMUST00000111816 Tpm4Q6IRU2 248 aa22.95■■□□□ 1.26
Trim71-201ENSMUST00000111816 Mrvi1Q9WUX5 899 aaKnown RBP22.93■■□□□ 1.26
Trim71-201ENSMUST00000111816 BlmO88700 1416 aa22.92■■□□□ 1.26
Trim71-201ENSMUST00000111816 Tpm1P58771 284 aa22.9■■□□□ 1.26
Trim71-201ENSMUST00000111816 Rwdd1Q9CQK7 243 aa22.9■■□□□ 1.26
Trim71-201ENSMUST00000111816 Glipr1l2Q9CQ35 332 aa22.89■■□□□ 1.25
Trim71-201ENSMUST00000111816 Sart3Q9JLI8 962 aaKnown RBP22.88■■□□□ 1.25
Trim71-201ENSMUST00000111816 Fkbp15Q6P9Q6 1216 aaKnown RBP22.88■■□□□ 1.25
Trim71-201ENSMUST00000111816 Dctn1O08788 1281 aa22.87■■□□□ 1.25
Trim71-201ENSMUST00000111816 Rrp9Q91WM3 475 aaKnown RBP22.87■■□□□ 1.25
Trim71-201ENSMUST00000111816 EspnQ9ET47 871 aa22.87■■□□□ 1.25
Trim71-201ENSMUST00000111816 CgnP59242 1191 aa22.86■■□□□ 1.25
Trim71-201ENSMUST00000111816 Ralbp1Q62172 648 aa22.86■■□□□ 1.25
Trim71-201ENSMUST00000111816 Isy1Q69ZQ2 285 aaKnown RBP22.86■■□□□ 1.25
Trim71-201ENSMUST00000111816 Rgl3Q3UYI5 709 aa22.85■■□□□ 1.25
Trim71-201ENSMUST00000111816 Abcc9P70170 1546 aa22.85■■□□□ 1.25
Trim71-201ENSMUST00000111816 B4galnt3Q6L8S8 986 aa22.84■■□□□ 1.25
Trim71-201ENSMUST00000111816 Dbr1Q923B1 550 aa22.84■■□□□ 1.25
Trim71-201ENSMUST00000111816 Atp6v1dP57746 247 aa22.84■■□□□ 1.25
Trim71-201ENSMUST00000111816 Chic2Q9D9G3 165 aa22.84■■□□□ 1.25
Trim71-201ENSMUST00000111816 Tpm2P58774 284 aa22.83■■□□□ 1.25
Trim71-201ENSMUST00000111816 Armcx1Q9CX83 456 aa22.82■■□□□ 1.24
Trim71-201ENSMUST00000111816 Neurod2Q62414 383 aa22.81■■□□□ 1.24
Trim71-201ENSMUST00000111816 Tpd52l1O54818 204 aa22.81■■□□□ 1.24
Trim71-201ENSMUST00000111816 Srpk2O54781 681 aaKnown RBP22.81■■□□□ 1.24
Trim71-201ENSMUST00000111816 Sycp1Q62209 993 aa22.81■■□□□ 1.24
Trim71-201ENSMUST00000111816 Chmp5Q9D7S9 219 aa22.81■■□□□ 1.24
Trim71-201ENSMUST00000111816 Hap1O35668 628 aa22.8■■□□□ 1.24
Trim71-201ENSMUST00000111816 Gps2Q921N8 327 aa22.8■■□□□ 1.24
Trim71-201ENSMUST00000111816 Supt16hQ920B9 1047 aa22.79■■□□□ 1.24
Trim71-201ENSMUST00000111816 SlkO54988 1233 aa22.79■■□□□ 1.24
Trim71-201ENSMUST00000111816 Znf526Q8BI66 675 aa22.78■■□□□ 1.24
Trim71-201ENSMUST00000111816 Nol10Q5RJG1 687 aaKnown RBP22.77■■□□□ 1.24
Trim71-201ENSMUST00000111816 Rsph3aQ3UFY4 516 aa22.76■■□□□ 1.23
Trim71-201ENSMUST00000111816 Rufy1Q8BIJ7 712 aa22.76■■□□□ 1.23
Trim71-201ENSMUST00000111816 Pnmal2G3X9N3 661 aa22.76■■□□□ 1.23
Trim71-201ENSMUST00000111816 1700019A02RikA0A087WPV9 146 aa22.76■■□□□ 1.23
Trim71-201ENSMUST00000111816 BbxQ8VBW5 907 aa22.75■■□□□ 1.23
Trim71-201ENSMUST00000111816 Znhit6Q3UFB2 460 aaKnown RBP22.75■■□□□ 1.23
Trim71-201ENSMUST00000111816 Card11Q8CIS0 1159 aa22.74■■□□□ 1.23
Trim71-201ENSMUST00000111816 Trim55G3X8Y1 545 aa22.74■■□□□ 1.23
Trim71-201ENSMUST00000111816 MecomP14404 1042 aa22.74■■□□□ 1.23
Trim71-201ENSMUST00000111816 Ccer1Q9CQL2 403 aa22.74■■□□□ 1.23
Trim71-201ENSMUST00000111816 Ipo8Q7TMY7 1010 aa22.73■■□□□ 1.23
Trim71-201ENSMUST00000111816 Ccdc47Q9D024 483 aaKnown RBP22.72■■□□□ 1.23
Trim71-201ENSMUST00000111816 Ipo7Q9EPL8 1038 aaKnown RBP22.72■■□□□ 1.23
Trim71-201ENSMUST00000111816 Def6Q8C2K1 630 aa22.69■■□□□ 1.22
Trim71-201ENSMUST00000111816 IbspQ61711 324 aa22.69■■□□□ 1.22
Trim71-201ENSMUST00000111816 Fhad1A6PWD2 1420 aa22.69■■□□□ 1.22
Trim71-201ENSMUST00000111816 Kdm2aP59997 1161 aa22.68■■□□□ 1.22
Trim71-201ENSMUST00000111816 A0A1L1SQF0 893 aa22.67■■□□□ 1.22
Trim71-201ENSMUST00000111816 Arid4aF8VPQ2 1261 aaKnown RBP22.67■■□□□ 1.22
Trim71-201ENSMUST00000111816 Mre11Q61216 706 aa22.66■■□□□ 1.22
Trim71-201ENSMUST00000111816 Mroh3A0A1D5RM54 893 aa22.66■■□□□ 1.22
Trim71-201ENSMUST00000111816 Mex3cQ05A36 652 aaKnown RBP22.65■■□□□ 1.22
Trim71-201ENSMUST00000111816 CrebrfQ8CDG5 640 aaKnown RBP22.65■■□□□ 1.22
Trim71-201ENSMUST00000111816 Rtf1A2AQ19 715 aaKnown RBP22.64■■□□□ 1.22
Trim71-201ENSMUST00000111816 SafbD3YXK2 937 aaKnown RBP22.63■■□□□ 1.21
Trim71-201ENSMUST00000111816 Vps53Q8CCB4 832 aa22.63■■□□□ 1.21
Trim71-201ENSMUST00000111816 Kif3aP28741 701 aa22.62■■□□□ 1.21
Trim71-201ENSMUST00000111816 Sf3a1Q8K4Z5 791 aaKnown RBP22.62■■□□□ 1.21
Trim71-201ENSMUST00000111816 Kif3cO35066 796 aa22.61■■□□□ 1.21
Trim71-201ENSMUST00000111816 Gcom1E9PZ54 550 aa22.61■■□□□ 1.21
Trim71-201ENSMUST00000111816 MyzapQ3UIJ9 466 aa22.61■■□□□ 1.21
Trim71-201ENSMUST00000111816 Kri1Q8VDQ9 704 aaKnown RBP22.6■■□□□ 1.21
Trim71-201ENSMUST00000111816 PrkcshO08795 521 aa22.6■■□□□ 1.21
Trim71-201ENSMUST00000111816 Odf2A3KGV1 830 aaKnown RBP22.59■■□□□ 1.21
Trim71-201ENSMUST00000111816 Gm20521D3Z5F7 333 aa22.59■■□□□ 1.21
Trim71-201ENSMUST00000111816 Gabpb2P81069 414 aa22.59■■□□□ 1.21
Trim71-201ENSMUST00000111816 St18Q80TY4 1045 aa22.59■■□□□ 1.21
Trim71-201ENSMUST00000111816 Gtf3c5Q8R2T8 520 aa22.58■■□□□ 1.21
Trim71-201ENSMUST00000111816 Hook1Q8BIL5 728 aa22.58■■□□□ 1.2
Trim71-201ENSMUST00000111816 Stag3O70576 1240 aa22.57■■□□□ 1.2
Trim71-201ENSMUST00000111816 Gm21969J3QJZ1 289 aa22.56■■□□□ 1.2
Trim71-201ENSMUST00000111816 EzrP26040 586 aaKnown RBP22.55■■□□□ 1.2
Trim71-201ENSMUST00000111816 Ccdc173A0JLY1 547 aa22.54■■□□□ 1.2
Trim71-201ENSMUST00000111816 Paf1Q8K2T8 535 aa22.54■■□□□ 1.2
Trim71-201ENSMUST00000111816 Hmgn5Q9JL35 406 aa22.54■■□□□ 1.2
Trim71-201ENSMUST00000111816 Ak7Q9D2H2 614 aa22.53■■□□□ 1.2
Trim71-201ENSMUST00000111816 Fam13bQ8K2H3 851 aa22.52■■□□□ 1.2
Trim71-201ENSMUST00000111816 Slc4a3P16283 1227 aa22.52■■□□□ 1.2
Trim71-201ENSMUST00000111816 HmmrQ00547 794 aaKnown RBP22.52■■□□□ 1.2
Trim71-201ENSMUST00000111816 Filip1lQ6P6L0 1131 aa22.52■■□□□ 1.2
Trim71-201ENSMUST00000111816 Ppm1eQ80TL0 749 aa22.51■■□□□ 1.19
Trim71-201ENSMUST00000111816 TimelessQ9R1X4 1197 aa22.51■■□□□ 1.19
Trim71-201ENSMUST00000111816 Mns1Q61884 491 aa22.51■■□□□ 1.19
Trim71-201ENSMUST00000111816 Mical1Q8VDP3 1048 aa22.51■■□□□ 1.19
Trim71-201ENSMUST00000111816 Grwd1Q810D6 446 aaKnown RBP22.5■■□□□ 1.19
Trim71-201ENSMUST00000111816 Tomm22Q9CPQ3 142 aa22.5■■□□□ 1.19
Trim71-201ENSMUST00000111816 Ipo4Q8VI75 1082 aa22.5■■□□□ 1.19
Trim71-201ENSMUST00000111816 Fam193aQ8CGI1 1231 aaKnown RBP22.49■■□□□ 1.19
Trim71-201ENSMUST00000111816 Sh3bgrQ9WUZ7 214 aa22.49■■□□□ 1.19
Trim71-201ENSMUST00000111816 Ylpm1Q9R0I7 1386 aaKnown RBP22.49■■□□□ 1.19
Retrieved 100 of 22,080 RNA–protein pairs in 15.3 ms