RNA–Protein interactions for RNA: ENSMUST00000102838.9

Sptbn1-203, Transcript of Spectrin beta chain, non-erythrocytic 1, mousemouse

TSL 1 (best) BASIC

Gene Sptbn1, Length 9,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn1-203ENSMUST00000102838 Ecm2Q5FW85 670 aa11.28□□□□□ -0.6
Sptbn1-203ENSMUST00000102838 Pak3Q61036 559 aa11.27□□□□□ -0.61
Sptbn1-203ENSMUST00000102838 Znf316Q6PGE4 1016 aa11.27□□□□□ -0.61
Sptbn1-203ENSMUST00000102838 MecomP14404 1042 aa11.26□□□□□ -0.61
Sptbn1-203ENSMUST00000102838 Tpm4Q6IRU2 248 aa11.26□□□□□ -0.61
Sptbn1-203ENSMUST00000102838 R3hcc1Q8BSI6 488 aa11.26□□□□□ -0.61
Sptbn1-203ENSMUST00000102838 CanxP35564 591 aaKnown RBP11.25□□□□□ -0.61
Sptbn1-203ENSMUST00000102838 PtmsQ9D0J8 101 aaKnown RBP11.25□□□□□ -0.61
Sptbn1-203ENSMUST00000102838 Kcnn1Q9EQR3 537 aa11.25□□□□□ -0.61
Sptbn1-203ENSMUST00000102838 SetQ9EQU5 289 aaKnown RBP11.25□□□□□ -0.61
Sptbn1-203ENSMUST00000102838 Q3TQI7 289 aaKnown RBP11.25□□□□□ -0.61
Sptbn1-203ENSMUST00000102838 Rsf1E9PWW9 1441 aaKnown RBP11.25□□□□□ -0.61
Sptbn1-203ENSMUST00000102838 Cep164Q5DU05 1446 aa11.24□□□□□ -0.61
Sptbn1-203ENSMUST00000102838 Anks4bQ8K3X6 423 aa11.24□□□□□ -0.61
Sptbn1-203ENSMUST00000102838 Sox12Q04890 314 aa11.23□□□□□ -0.61
Sptbn1-203ENSMUST00000102838 Card11Q8CIS0 1159 aa11.23□□□□□ -0.61
Sptbn1-203ENSMUST00000102838 Wdr43Q6ZQL4 677 aaKnown RBP11.23□□□□□ -0.61
Sptbn1-203ENSMUST00000102838 Ap3b2Q9JME5 1082 aa11.23□□□□□ -0.61
Sptbn1-203ENSMUST00000102838 Cwc22Q8C5N3 908 aaKnown RBP11.22□□□□□ -0.61
Sptbn1-203ENSMUST00000102838 Znf710Q3U288 666 aa11.22□□□□□ -0.61
Sptbn1-203ENSMUST00000102838 BccipQ9CWI3 316 aa11.22□□□□□ -0.61
Sptbn1-203ENSMUST00000102838 Neurod2Q62414 383 aa11.21□□□□□ -0.62
Sptbn1-203ENSMUST00000102838 Map7d2A2AG50 781 aa11.2□□□□□ -0.62
Sptbn1-203ENSMUST00000102838 Kif15Q6P9L6 1387 aa11.2□□□□□ -0.62
Sptbn1-203ENSMUST00000102838 Smarca2Q6DIC0 1577 aa11.2□□□□□ -0.62
Sptbn1-203ENSMUST00000102838 U2surpQ6NV83 1029 aaKnown RBP11.2□□□□□ -0.62
Sptbn1-203ENSMUST00000102838 Tpm2P58774 284 aa11.2□□□□□ -0.62
Sptbn1-203ENSMUST00000102838 Skap1Q3UUV5 355 aa11.2□□□□□ -0.62
Sptbn1-203ENSMUST00000102838 Setd5Q5XJV7 1441 aa11.2□□□□□ -0.62
Sptbn1-203ENSMUST00000102838 Ftsj3Q9DBE9 838 aaKnown RBP11.19□□□□□ -0.62
Sptbn1-203ENSMUST00000102838 Tpm3P21107 285 aaKnown RBP11.19□□□□□ -0.62
Sptbn1-203ENSMUST00000102838 Tpd52l1O54818 204 aa11.19□□□□□ -0.62
Sptbn1-203ENSMUST00000102838 Ccdc43Q9CR29 222 aaKnown RBP11.18□□□□□ -0.62
Sptbn1-203ENSMUST00000102838 Cald1E9QA15 768 aaKnown RBP11.17□□□□□ -0.62
Sptbn1-203ENSMUST00000102838 Gm21969J3QJZ1 289 aa11.17□□□□□ -0.62
Sptbn1-203ENSMUST00000102838 Pcmtd1P59913 357 aa11.17□□□□□ -0.62
Sptbn1-203ENSMUST00000102838 Apbb1Q9QXJ1 710 aa11.17□□□□□ -0.62
Sptbn1-203ENSMUST00000102838 Gm38655A0A286YDK6 273 aa11.17□□□□□ -0.62
Sptbn1-203ENSMUST00000102838 Cnga1P29974 684 aa11.17□□□□□ -0.62
Sptbn1-203ENSMUST00000102838 Fhad1A6PWD2 1420 aa11.17□□□□□ -0.62
Sptbn1-203ENSMUST00000102838 UvssaQ9D479 717 aa11.16□□□□□ -0.62
Sptbn1-203ENSMUST00000102838 Tnnt1O88346 262 aa11.16□□□□□ -0.62
Sptbn1-203ENSMUST00000102838 Smc4Q8CG47 1286 aa11.16□□□□□ -0.62
Sptbn1-203ENSMUST00000102838 Krt82Q99M74 516 aa11.16□□□□□ -0.62
Sptbn1-203ENSMUST00000102838 AknaQ80VW7 1404 aa11.16□□□□□ -0.62
Sptbn1-203ENSMUST00000102838 Dhx16G3X8X0 1044 aaKnown RBP11.16□□□□□ -0.62
Sptbn1-203ENSMUST00000102838 Nap1l2P51860 460 aa11.16□□□□□ -0.62
Sptbn1-203ENSMUST00000102838 Lemd3Q9WU40 921 aa11.16□□□□□ -0.62
Sptbn1-203ENSMUST00000102838 Stk26Q99JT2 416 aa11.15□□□□□ -0.62
Sptbn1-203ENSMUST00000102838 Plin1Q8CGN5 517 aa11.15□□□□□ -0.62
Sptbn1-203ENSMUST00000102838 Ofd1Q80Z25 1017 aa11.15□□□□□ -0.62
Sptbn1-203ENSMUST00000102838 AU015836B2RUM3 263 aa11.14□□□□□ -0.63
Sptbn1-203ENSMUST00000102838 Ccdc27Q3V036 639 aa11.13□□□□□ -0.63
Sptbn1-203ENSMUST00000102838 Ppm1gQ61074 542 aa11.13□□□□□ -0.63
Sptbn1-203ENSMUST00000102838 Arid3cA6PWV5 409 aa11.13□□□□□ -0.63
Sptbn1-203ENSMUST00000102838 Smarce1O54941 411 aaKnown RBP11.12□□□□□ -0.63
Sptbn1-203ENSMUST00000102838 Ppp4r3bQ922R5 820 aa11.12□□□□□ -0.63
Sptbn1-203ENSMUST00000102838 CgnP59242 1191 aa11.1□□□□□ -0.63
Sptbn1-203ENSMUST00000102838 Tpm1P58771 284 aa11.1□□□□□ -0.63
Sptbn1-203ENSMUST00000102838 Birc3O08863 600 aa11.1□□□□□ -0.63
Sptbn1-203ENSMUST00000102838 Cetn4Q8K4K1 168 aa11.1□□□□□ -0.63
Sptbn1-203ENSMUST00000102838 Brpf1B2RRD7 1212 aa11.09□□□□□ -0.63
Sptbn1-203ENSMUST00000102838 Bcl11aQ9QYE3 773 aa11.09□□□□□ -0.63
Sptbn1-203ENSMUST00000102838 Hmgb2P30681 210 aaKnown RBP11.08□□□□□ -0.63
Sptbn1-203ENSMUST00000102838 Evc2Q8K1G2 1220 aa11.08□□□□□ -0.63
Sptbn1-203ENSMUST00000102838 Ccer1Q9CQL2 403 aa11.08□□□□□ -0.64
Sptbn1-203ENSMUST00000102838 Rab11fip3Q8CHD8 1047 aa11.08□□□□□ -0.64
Sptbn1-203ENSMUST00000102838 Kdm5dQ62240 1548 aa11.07□□□□□ -0.64
Sptbn1-203ENSMUST00000102838 Eva1cP58659 440 aa11.07□□□□□ -0.64
Sptbn1-203ENSMUST00000102838 Lrrcc1Q69ZB0 1026 aa11.07□□□□□ -0.64
Sptbn1-203ENSMUST00000102838 Mbd3Q9Z2D8 285 aaKnown RBP11.07□□□□□ -0.64
Sptbn1-203ENSMUST00000102838 Irx3P81067 507 aa11.06□□□□□ -0.64
Sptbn1-203ENSMUST00000102838 A0A1L1SQF0 893 aa11.06□□□□□ -0.64
Sptbn1-203ENSMUST00000102838 Armcx1Q9CX83 456 aa11.06□□□□□ -0.64
Sptbn1-203ENSMUST00000102838 Gtf2e1Q9D0D5 440 aa11.06□□□□□ -0.64
Sptbn1-203ENSMUST00000102838 RdxP26043 583 aaKnown RBP11.06□□□□□ -0.64
Sptbn1-203ENSMUST00000102838 Ipo7Q9EPL8 1038 aaKnown RBP11.06□□□□□ -0.64
Sptbn1-203ENSMUST00000102838 Cplx2P84086 134 aa11.05□□□□□ -0.64
Sptbn1-203ENSMUST00000102838 Sirt1Q923E4 737 aa11.05□□□□□ -0.64
Sptbn1-203ENSMUST00000102838 Podxl2Q8CAE9 603 aa11.05□□□□□ -0.64
Sptbn1-203ENSMUST00000102838 Aebp2Q9Z248 504 aaKnown RBP11.05□□□□□ -0.64
Sptbn1-203ENSMUST00000102838 Chmp7Q8R1T1 451 aa11.04□□□□□ -0.64
Sptbn1-203ENSMUST00000102838 CrebrfQ8CDG5 640 aaKnown RBP11.04□□□□□ -0.64
Sptbn1-203ENSMUST00000102838 Mical1Q8VDP3 1048 aa11.04□□□□□ -0.64
Sptbn1-203ENSMUST00000102838 Ncbp3Q8BZR9 615 aaKnown RBP11.03□□□□□ -0.64
Sptbn1-203ENSMUST00000102838 Atf3Q60765 181 aa11.03□□□□□ -0.64
Sptbn1-203ENSMUST00000102838 MsnP26041 577 aaKnown RBP11.03□□□□□ -0.64
Sptbn1-203ENSMUST00000102838 Ccp110Q7TSH4 1004 aa11.03□□□□□ -0.64
Sptbn1-203ENSMUST00000102838 Hap1O35668 628 aa11.03□□□□□ -0.64
Sptbn1-203ENSMUST00000102838 AppP12023 770 aa11.03□□□□□ -0.64
Sptbn1-203ENSMUST00000102838 AcrbpQ3V140 540 aa11.03□□□□□ -0.64
Sptbn1-203ENSMUST00000102838 Tmco5bQ80X59 307 aa11.02□□□□□ -0.64
Sptbn1-203ENSMUST00000102838 Tmf1B9EKI3 1091 aa11.01□□□□□ -0.65
Sptbn1-203ENSMUST00000102838 March6Q6ZQ89 909 aa11.01□□□□□ -0.65
Sptbn1-203ENSMUST00000102838 ArsiQ32KI9 573 aa11.01□□□□□ -0.65
Sptbn1-203ENSMUST00000102838 Erich6bQ9D4S6 220 aa11.01□□□□□ -0.65
Sptbn1-203ENSMUST00000102838 Rwdd1Q9CQK7 243 aa11□□□□□ -0.65
Sptbn1-203ENSMUST00000102838 U2af1Q9D883 239 aaKnown RBP11□□□□□ -0.65
Sptbn1-203ENSMUST00000102838 Eea1Q8BL66 1411 aa11□□□□□ -0.65
Sptbn1-203ENSMUST00000102838 Cttnbp2B9EJA2 1648 aa11□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 31.9 ms