RNA–Protein interactions for RNA: ENSMUST00000061209.6

Ccdc71-201, Transcript of Coiled-coil domain-containing protein 71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc71, Length 3,092 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71-201ENSMUST00000061209 Atp10dQ8K2X1 1416 aa19.21■□□□□ 0.67
Ccdc71-201ENSMUST00000061209 Abcc5Q9R1X5 1436 aa19.21■□□□□ 0.67
Ccdc71-201ENSMUST00000061209 Cdc42bpaQ3UU96 1719 aa19.21■□□□□ 0.67
Ccdc71-201ENSMUST00000061209 Igf1rQ60751 1373 aa19.21■□□□□ 0.67
Ccdc71-201ENSMUST00000061209 Mia2Q91ZV0 1396 aa19.19■□□□□ 0.66
Ccdc71-201ENSMUST00000061209 Cdk11bP24788 784 aaKnown RBP19.19■□□□□ 0.66
Ccdc71-201ENSMUST00000061209 Adcy10Q8C0T9 1614 aa19.18■□□□□ 0.66
Ccdc71-201ENSMUST00000061209 NclP09405 707 aaKnown RBP19.18■□□□□ 0.66
Ccdc71-201ENSMUST00000061209 Plekhh2Q8C115 1491 aa19.18■□□□□ 0.66
Ccdc71-201ENSMUST00000061209 Gcc2Q8CHG3 1679 aa19.17■□□□□ 0.66
Ccdc71-201ENSMUST00000061209 Cep170Q6A065 1588 aa19.17■□□□□ 0.66
Ccdc71-201ENSMUST00000061209 Zbtb7cQ8VCZ7 619 aa19.15■□□□□ 0.66
Ccdc71-201ENSMUST00000061209 Kdm6bQ5NCY0 1641 aa19.15■□□□□ 0.66
Ccdc71-201ENSMUST00000061209 Mlh3A0A1Y7VMP7 1443 aa19.12■□□□□ 0.65
Ccdc71-201ENSMUST00000061209 Fhad1A6PWD2 1420 aa19.12■□□□□ 0.65
Ccdc71-201ENSMUST00000061209 Arhgap5P97393 1501 aa19.12■□□□□ 0.65
Ccdc71-201ENSMUST00000061209 Sart1Q9Z315 806 aaKnown RBP19.11■□□□□ 0.65
Ccdc71-201ENSMUST00000061209 Zfp644E9QA22 1323 aa19.11■□□□□ 0.65
Ccdc71-201ENSMUST00000061209 AI481877A2ALV5 1481 aa19.11■□□□□ 0.65
Ccdc71-201ENSMUST00000061209 UacaQ8CGB3 1411 aa19.11■□□□□ 0.65
Ccdc71-201ENSMUST00000061209 Wdr7Q920I9 1489 aa19.1■□□□□ 0.65
Ccdc71-201ENSMUST00000061209 NhsB1AV60 1647 aa19.1■□□□□ 0.65
Ccdc71-201ENSMUST00000061209 Ttbk1Q6PCN3 1308 aa19.1■□□□□ 0.65
Ccdc71-201ENSMUST00000061209 Trappc8E9PWG2 1437 aa19.09■□□□□ 0.65
Ccdc71-201ENSMUST00000061209 Rrp7aQ9D1C9 280 aaKnown RBP19.08■□□□□ 0.65
Ccdc71-201ENSMUST00000061209 Vps8Q0P5W1 1427 aa19.08■□□□□ 0.64
Ccdc71-201ENSMUST00000061209 Lrrc9Q8CDN9 1456 aa19.07■□□□□ 0.64
Ccdc71-201ENSMUST00000061209 Cul7Q8VE73 1689 aa19.07■□□□□ 0.64
Ccdc71-201ENSMUST00000061209 TonslQ6NZL6 1363 aa19.07■□□□□ 0.64
Ccdc71-201ENSMUST00000061209 Caskin1Q6P9K8 1431 aa19.05■□□□□ 0.64
Ccdc71-201ENSMUST00000061209 Adgrl3Q80TS3 1537 aa19.05■□□□□ 0.64
Ccdc71-201ENSMUST00000061209 Ppp1r18Q8BQ30 594 aa19.04■□□□□ 0.64
Ccdc71-201ENSMUST00000061209 Fam208aQ69ZR9 1610 aaKnown RBP19.04■□□□□ 0.64
Ccdc71-201ENSMUST00000061209 Las1lA2BE28 776 aaKnown RBP19.03■□□□□ 0.64
Ccdc71-201ENSMUST00000061209 Ccer2J3QPU5 274 aa19.03■□□□□ 0.64
Ccdc71-201ENSMUST00000061209 Il16O54824 1322 aa19.03■□□□□ 0.64
Ccdc71-201ENSMUST00000061209 Adgrb2Q8CGM1 1561 aa19■□□□□ 0.63
Ccdc71-201ENSMUST00000061209 Dennd4bQ3U1Y4 1499 aa18.99■□□□□ 0.63
Ccdc71-201ENSMUST00000061209 Mphosph9A6H5Y1 991 aa18.98■□□□□ 0.63
Ccdc71-201ENSMUST00000061209 Col17a1Q07563 1470 aa18.98■□□□□ 0.63
Ccdc71-201ENSMUST00000061209 Abca8bQ8K440 1620 aa18.97■□□□□ 0.63
Ccdc71-201ENSMUST00000061209 Hspa5P20029 655 aaKnown RBP18.96■□□□□ 0.63
Ccdc71-201ENSMUST00000061209 Lemd3Q9WU40 921 aa18.94■□□□□ 0.62
Ccdc71-201ENSMUST00000061209 Hnrnpul2Q00PI9 745 aaKnown RBP18.94■□□□□ 0.62
Ccdc71-201ENSMUST00000061209 Rfx7F8VPJ6 1459 aa18.94■□□□□ 0.62
Ccdc71-201ENSMUST00000061209 SphkapQ6NSW3 1687 aa18.94■□□□□ 0.62
Ccdc71-201ENSMUST00000061209 Map3k5O35099 1380 aa18.94■□□□□ 0.62
Ccdc71-201ENSMUST00000061209 Kiaa1210E9Q0C6 1637 aa18.93■□□□□ 0.62
Ccdc71-201ENSMUST00000061209 Kdm3bQ6ZPY7 1562 aa18.93■□□□□ 0.62
Ccdc71-201ENSMUST00000061209 Rnf17Q99MV7 1640 aa18.9■□□□□ 0.62
Ccdc71-201ENSMUST00000061209 Map4P27546 1125 aaKnown RBP18.88■□□□□ 0.61
Ccdc71-201ENSMUST00000061209 Zfyve16Q80U44 1528 aa18.88■□□□□ 0.61
Ccdc71-201ENSMUST00000061209 Trak1Q6PD31 939 aa18.87■□□□□ 0.61
Ccdc71-201ENSMUST00000061209 Gm32742A0A1B0GT42 1604 aa18.87■□□□□ 0.61
Ccdc71-201ENSMUST00000061209 Nup155Q99P88 1391 aaKnown RBP18.86■□□□□ 0.61
Ccdc71-201ENSMUST00000061209 Pkd2O35245 966 aa18.86■□□□□ 0.61
Ccdc71-201ENSMUST00000061209 Ttll5Q8CHB8 1328 aa18.86■□□□□ 0.61
Ccdc71-201ENSMUST00000061209 Ak9G3UYQ4 1894 aa18.85■□□□□ 0.61
Ccdc71-201ENSMUST00000061209 Wdr66E9Q743 1299 aa18.85■□□□□ 0.61
Ccdc71-201ENSMUST00000061209 Setbp1Q9Z180 1582 aa18.85■□□□□ 0.61
Ccdc71-201ENSMUST00000061209 Cfap74Q3UY96 1578 aa18.84■□□□□ 0.61
Ccdc71-201ENSMUST00000061209 Ppargc1bQ8VHJ7 1014 aa18.84■□□□□ 0.61
Ccdc71-201ENSMUST00000061209 Neurod1Q60867 357 aa18.83■□□□□ 0.6
Ccdc71-201ENSMUST00000061209 Spag9Q58A65 1321 aaKnown RBP18.82■□□□□ 0.6
Ccdc71-201ENSMUST00000061209 Aebp2Q9Z248 504 aaKnown RBP18.81■□□□□ 0.6
Ccdc71-201ENSMUST00000061209 Abcc3B2RX12 1523 aa18.81■□□□□ 0.6
Ccdc71-201ENSMUST00000061209 Depdc5P61460 1591 aa18.81■□□□□ 0.6
Ccdc71-201ENSMUST00000061209 AlkP97793 1621 aa18.8■□□□□ 0.6
Ccdc71-201ENSMUST00000061209 Ssh2Q5SW75 1423 aa18.8■□□□□ 0.6
Ccdc71-201ENSMUST00000061209 Prdm16A2A935 1275 aa18.8■□□□□ 0.6
Ccdc71-201ENSMUST00000061209 Ankrd36D3Z4K0 1415 aa18.79■□□□□ 0.6
Ccdc71-201ENSMUST00000061209 Kif3bQ61771 747 aa18.79■□□□□ 0.6
Ccdc71-201ENSMUST00000061209 Pprc1Q6NZN1 1644 aa18.78■□□□□ 0.6
Ccdc71-201ENSMUST00000061209 Clstn2Q9ER65 966 aa18.77■□□□□ 0.6
Ccdc71-201ENSMUST00000061209 Fmn2Q9JL04 1578 aa18.76■□□□□ 0.59
Ccdc71-201ENSMUST00000061209 Abca9Q8K449 1623 aa18.76■□□□□ 0.59
Ccdc71-201ENSMUST00000061209 Plppr3Q7TPB0 716 aa18.75■□□□□ 0.59
Ccdc71-201ENSMUST00000061209 Kidins220E9Q9B7 1793 aa18.75■□□□□ 0.59
Ccdc71-201ENSMUST00000061209 Supt5hO55201 1082 aaKnown RBP18.74■□□□□ 0.59
Ccdc71-201ENSMUST00000061209 Dhx9O70133 1380 aaKnown RBP18.74■□□□□ 0.59
Ccdc71-201ENSMUST00000061209 Adgrl2Q8JZZ7 1487 aa18.74■□□□□ 0.59
Ccdc71-201ENSMUST00000061209 Cdc42bpbQ7TT50 1713 aa18.73■□□□□ 0.59
Ccdc71-201ENSMUST00000061209 Pde4cQ3UEI1 686 aa18.72■□□□□ 0.59
Ccdc71-201ENSMUST00000061209 Pdcd11Q6NS46 1862 aaKnown RBP18.72■□□□□ 0.59
Ccdc71-201ENSMUST00000061209 OvosQ3UU35 1456 aa18.71■□□□□ 0.59
Ccdc71-201ENSMUST00000061209 Ptch1Q61115 1434 aa18.7■□□□□ 0.58
Ccdc71-201ENSMUST00000061209 Rgl3Q3UYI5 709 aa18.69■□□□□ 0.58
Ccdc71-201ENSMUST00000061209 Usp47Q8BY87 1376 aa18.69■□□□□ 0.58
Ccdc71-201ENSMUST00000061209 Erich6D3Z6S9 713 aa18.68■□□□□ 0.58
Ccdc71-201ENSMUST00000061209 Clasp1Q80TV8 1535 aaKnown RBP18.68■□□□□ 0.58
Ccdc71-201ENSMUST00000061209 Dnajc5P60904 198 aa18.65■□□□□ 0.58
Ccdc71-201ENSMUST00000061209 Mast1Q9R1L5 1570 aa18.65■□□□□ 0.58
Ccdc71-201ENSMUST00000061209 Fhod3Q76LL6 1578 aa18.63■□□□□ 0.57
Ccdc71-201ENSMUST00000061209 Cd109Q8R422 1442 aa18.62■□□□□ 0.57
Ccdc71-201ENSMUST00000061209 Sall2Q9QX96 1004 aa18.62■□□□□ 0.57
Ccdc71-201ENSMUST00000061209 Hecw1Q8K4P8 1604 aa18.61■□□□□ 0.57
Ccdc71-201ENSMUST00000061209 Trpm2Q91YD4 1506 aa18.61■□□□□ 0.57
Ccdc71-201ENSMUST00000061209 Supt6hQ62383 1726 aaKnown RBP18.6■□□□□ 0.57
Ccdc71-201ENSMUST00000061209 Pcgf6Q99NA9 353 aa18.6■□□□□ 0.57
Ccdc71-201ENSMUST00000061209 Nos1Q9Z0J4 1429 aa18.6■□□□□ 0.57
Retrieved 100 of 22,080 RNA–protein pairs in 50 ms