RNA–Protein interactions for RNA: ENSMUST00000060516.13

Cd44-202, Transcript of CD44 antigen, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cd44, Length 3,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44-202ENSMUST00000060516 SynmQ70IV5 1561 aa7.04□□□□□ -1.28
Cd44-202ENSMUST00000060516 Prm3Q62100 101 aa7.03□□□□□ -1.28
Cd44-202ENSMUST00000060516 Talpid3E9PV87 1520 aa7.02□□□□□ -1.29
Cd44-202ENSMUST00000060516 Kif14L0N7N1 1674 aaKnown RBP7.02□□□□□ -1.29
Cd44-202ENSMUST00000060516 Hnrnpul2Q00PI9 745 aaKnown RBP7.02□□□□□ -1.29
Cd44-202ENSMUST00000060516 Kiaa0556Q8C753 1610 aa7.01□□□□□ -1.29
Cd44-202ENSMUST00000060516 Pla2r1Q62028 1487 aa7.01□□□□□ -1.29
Cd44-202ENSMUST00000060516 Slx4Q6P1D7 1565 aa7.01□□□□□ -1.29
Cd44-202ENSMUST00000060516 Abcc2Q8VI47 1543 aa7□□□□□ -1.29
Cd44-202ENSMUST00000060516 Camsap2Q8C1B1 1461 aa7□□□□□ -1.29
Cd44-202ENSMUST00000060516 Gemin5Q8BX17 1502 aaKnown RBP7□□□□□ -1.29
Cd44-202ENSMUST00000060516 Abca16E9PWJ7 1678 aa6.99□□□□□ -1.29
Cd44-202ENSMUST00000060516 Bcl11aQ9QYE3 773 aa6.99□□□□□ -1.29
Cd44-202ENSMUST00000060516 Rpap1Q80TE0 1409 aa6.98□□□□□ -1.29
Cd44-202ENSMUST00000060516 SafbD3YXK2 937 aaKnown RBP6.98□□□□□ -1.29
Cd44-202ENSMUST00000060516 Synj2Q9D2G5 1434 aa6.98□□□□□ -1.29
Cd44-202ENSMUST00000060516 Tnnt3Q9QZ47 272 aa6.98□□□□□ -1.29
Cd44-202ENSMUST00000060516 PtprmP28828 1452 aa6.98□□□□□ -1.29
Cd44-202ENSMUST00000060516 Lrrc9Q8CDN9 1456 aa6.98□□□□□ -1.29
Cd44-202ENSMUST00000060516 Znf710Q3U288 666 aa6.97□□□□□ -1.29
Cd44-202ENSMUST00000060516 DiexfQ8BTT6 772 aaKnown RBP6.97□□□□□ -1.29
Cd44-202ENSMUST00000060516 Clip1Q922J3 1391 aa6.97□□□□□ -1.29
Cd44-202ENSMUST00000060516 Depdc5P61460 1591 aa6.97□□□□□ -1.29
Cd44-202ENSMUST00000060516 Ppp4r2Q0VGB7 417 aa6.97□□□□□ -1.29
Cd44-202ENSMUST00000060516 Arap1Q4LDD4 1452 aa6.96□□□□□ -1.3
Cd44-202ENSMUST00000060516 Prex2Q3LAC4 1598 aa6.96□□□□□ -1.3
Cd44-202ENSMUST00000060516 ArxO35085 564 aa6.96□□□□□ -1.3
Cd44-202ENSMUST00000060516 Arhgap35Q91YM2 1499 aa6.96□□□□□ -1.3
Cd44-202ENSMUST00000060516 Zmym4A2A791 1549 aaKnown RBP6.95□□□□□ -1.3
Cd44-202ENSMUST00000060516 Znf608Q56A10 1511 aa6.95□□□□□ -1.3
Cd44-202ENSMUST00000060516 NhsB1AV60 1647 aa6.95□□□□□ -1.3
Cd44-202ENSMUST00000060516 Polr1aO35134 1717 aaKnown RBP6.93□□□□□ -1.3
Cd44-202ENSMUST00000060516 Rad54l2Q99NG0 1466 aa6.93□□□□□ -1.3
Cd44-202ENSMUST00000060516 NinlQ6ZQ12 1394 aa6.92□□□□□ -1.3
Cd44-202ENSMUST00000060516 CatipB9EKE5 520 aa6.92□□□□□ -1.3
Cd44-202ENSMUST00000060516 SphkapQ6NSW3 1687 aa6.92□□□□□ -1.3
Cd44-202ENSMUST00000060516 Jph4Q80WT0 628 aa6.91□□□□□ -1.3
Cd44-202ENSMUST00000060516 Shroom4Q1W617 1475 aa6.91□□□□□ -1.3
Cd44-202ENSMUST00000060516 Abca5Q8K448 1642 aa6.91□□□□□ -1.3
Cd44-202ENSMUST00000060516 OvosQ3UU35 1456 aa6.9□□□□□ -1.3
Cd44-202ENSMUST00000060516 UacaQ8CGB3 1411 aa6.9□□□□□ -1.3
Cd44-202ENSMUST00000060516 Atp10aO54827 1508 aa6.9□□□□□ -1.3
Cd44-202ENSMUST00000060516 Vsig10D3YX43 558 aa6.9□□□□□ -1.31
Cd44-202ENSMUST00000060516 Tiam1Q60610 1591 aa6.9□□□□□ -1.31
Cd44-202ENSMUST00000060516 Abca8bQ8K440 1620 aa6.89□□□□□ -1.31
Cd44-202ENSMUST00000060516 Neurl4Q5NCX5 1563 aa6.89□□□□□ -1.31
Cd44-202ENSMUST00000060516 MlecQ6ZQI3 291 aaKnown RBP6.89□□□□□ -1.31
Cd44-202ENSMUST00000060516 Il27Q8K3I6 234 aa6.89□□□□□ -1.31
Cd44-202ENSMUST00000060516 Eea1Q8BL66 1411 aa6.88□□□□□ -1.31
Cd44-202ENSMUST00000060516 Hs6st3Q9QYK4 470 aa6.88□□□□□ -1.31
Cd44-202ENSMUST00000060516 Erich3F6QRE9 1637 aa6.88□□□□□ -1.31
Cd44-202ENSMUST00000060516 Map3k1P53349 1493 aa6.88□□□□□ -1.31
Cd44-202ENSMUST00000060516 Myt1lP97500 1187 aa6.88□□□□□ -1.31
Cd44-202ENSMUST00000060516 Ap3b1Q9Z1T1 1105 aa6.88□□□□□ -1.31
Cd44-202ENSMUST00000060516 Bcl9Q9D219 1425 aa6.87□□□□□ -1.31
Cd44-202ENSMUST00000060516 WizO88286 1684 aaKnown RBP6.87□□□□□ -1.31
Cd44-202ENSMUST00000060516 Anp32aO35381 247 aa6.87□□□□□ -1.31
Cd44-202ENSMUST00000060516 Adamtsl3G3UXC7 1706 aa6.87□□□□□ -1.31
Cd44-202ENSMUST00000060516 Naip1Q9QWK5 1403 aa6.85□□□□□ -1.31
Cd44-202ENSMUST00000060516 Supt6hQ62383 1726 aaKnown RBP6.85□□□□□ -1.31
Cd44-202ENSMUST00000060516 A2mQ6GQT1 1474 aa6.85□□□□□ -1.31
Cd44-202ENSMUST00000060516 Nolc1E9Q5C9 702 aaKnown RBP6.85□□□□□ -1.31
Cd44-202ENSMUST00000060516 Eid3Q3V124 375 aa6.84□□□□□ -1.31
Cd44-202ENSMUST00000060516 Ncoa2Q61026 1462 aa6.84□□□□□ -1.31
Cd44-202ENSMUST00000060516 Arhgef40Q3UPH7 1517 aa6.83□□□□□ -1.32
Cd44-202ENSMUST00000060516 Gcc2Q8CHG3 1679 aa6.83□□□□□ -1.32
Cd44-202ENSMUST00000060516 Cul7Q8VE73 1689 aa6.83□□□□□ -1.32
Cd44-202ENSMUST00000060516 Ankrd36D3Z4K0 1415 aa6.83□□□□□ -1.32
Cd44-202ENSMUST00000060516 Washc2Q6PGL7 1334 aa6.83□□□□□ -1.32
Cd44-202ENSMUST00000060516 Ifnlr1Q8CGK5 535 aa6.83□□□□□ -1.32
Cd44-202ENSMUST00000060516 Ankrd26Q811D2 1581 aa6.83□□□□□ -1.32
Cd44-202ENSMUST00000060516 PxdnQ3UQ28 1475 aa6.83□□□□□ -1.32
Cd44-202ENSMUST00000060516 Hoxd11P23813 323 aa6.82□□□□□ -1.32
Cd44-202ENSMUST00000060516 Rtl5Q5DTT4 599 aa6.82□□□□□ -1.32
Cd44-202ENSMUST00000060516 Ahdc1Q6PAL7 1594 aaKnown RBP6.82□□□□□ -1.32
Cd44-202ENSMUST00000060516 Arhgap27A2AB59 869 aa6.81□□□□□ -1.32
Cd44-202ENSMUST00000060516 Gm13697A2AK42 830 aa6.81□□□□□ -1.32
Cd44-202ENSMUST00000060516 3425401B19RikD3Z1D3 1412 aa6.81□□□□□ -1.32
Cd44-202ENSMUST00000060516 Atp10dQ8K2X1 1416 aa6.81□□□□□ -1.32
Cd44-202ENSMUST00000060516 Lmo7E9PYF4 1699 aaKnown RBP6.81□□□□□ -1.32
Cd44-202ENSMUST00000060516 Styxl1Q9DAR2 321 aa6.8□□□□□ -1.32
Cd44-202ENSMUST00000060516 Setd5Q5XJV7 1441 aa6.8□□□□□ -1.32
Cd44-202ENSMUST00000060516 Stra8P70278 393 aa6.8□□□□□ -1.32
Cd44-202ENSMUST00000060516 Rapgef6Q5NCJ1 1609 aa6.79□□□□□ -1.32
Cd44-202ENSMUST00000060516 Pcf11G3X9Z4 1553 aa6.79□□□□□ -1.32
Cd44-202ENSMUST00000060516 Fhad1A6PWD2 1420 aa6.79□□□□□ -1.32
Cd44-202ENSMUST00000060516 NpatQ8BMA5 1420 aa6.79□□□□□ -1.32
Cd44-202ENSMUST00000060516 Dip2aQ8BWT5 1523 aa6.79□□□□□ -1.32
Cd44-202ENSMUST00000060516 Rsph4aQ8BYM7 716 aa6.79□□□□□ -1.32
Cd44-202ENSMUST00000060516 Calr4Q3TQS0 420 aa6.79□□□□□ -1.32
Cd44-202ENSMUST00000060516 Peg3Q3URU2 1571 aa6.79□□□□□ -1.32
Cd44-202ENSMUST00000060516 Supt16hQ920B9 1047 aa6.78□□□□□ -1.32
Cd44-202ENSMUST00000060516 Carmil1Q6EDY6 1374 aa6.78□□□□□ -1.32
Cd44-202ENSMUST00000060516 Gm7298A0A0N4SVU1 1476 aa6.78□□□□□ -1.32
Cd44-202ENSMUST00000060516 RereQ80TZ9 1558 aa6.78□□□□□ -1.32
Cd44-202ENSMUST00000060516 Ccdc141E9Q8Q6 1531 aa6.78□□□□□ -1.32
Cd44-202ENSMUST00000060516 Smg6P61406 1418 aaKnown RBP6.78□□□□□ -1.32
Cd44-202ENSMUST00000060516 PrkcshO08795 521 aa6.78□□□□□ -1.32
Cd44-202ENSMUST00000060516 Mroh2bQ7M6Y6 1581 aa6.78□□□□□ -1.32
Cd44-202ENSMUST00000060516 PzpQ61838 1495 aa6.78□□□□□ -1.32
Retrieved 100 of 22,080 RNA–protein pairs in 18.2 ms