RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Kdm6bQ5NCY0 1641 aa34,02■■■■□ 3,04
Upf3a-201ENSMUST00000043767 Atp10dQ8K2X1 1416 aa34■■■■□ 3,03
Upf3a-201ENSMUST00000043767 AI481877A2ALV5 1481 aa34■■■■□ 3,03
Upf3a-201ENSMUST00000043767 Gm156Q58A37 223 aa33,99■■■■□ 3,03
Upf3a-201ENSMUST00000043767 Kiaa1210E9Q0C6 1637 aa33,99■■■■□ 3,03
Upf3a-201ENSMUST00000043767 Chic2Q9D9G3 165 aa33,99■■■■□ 3,03
Upf3a-201ENSMUST00000043767 Abcc5Q9R1X5 1436 aa33,95■■■■□ 3,03
Upf3a-201ENSMUST00000043767 Tdrd9Q14BI7 1383 aa33,94■■■■□ 3,02
Upf3a-201ENSMUST00000043767 Lrrc9Q8CDN9 1456 aa33,94■■■■□ 3,02
Upf3a-201ENSMUST00000043767 Mlh3A0A1Y7VMP7 1443 aa33,94■■■■□ 3,02
Upf3a-201ENSMUST00000043767 Wdr7Q920I9 1489 aa33,93■■■■□ 3,02
Upf3a-201ENSMUST00000043767 Abca8bQ8K440 1620 aa33,9■■■■□ 3,02
Upf3a-201ENSMUST00000043767 Mia2Q91ZV0 1396 aa33,87■■■■□ 3,01
Upf3a-201ENSMUST00000043767 Cabp1Q9JLK7 227 aa33,87■■■■□ 3,01
Upf3a-201ENSMUST00000043767 Plekhh2Q8C115 1491 aa33,87■■■■□ 3,01
Upf3a-201ENSMUST00000043767 Supt5hO55201 1082 aaKnown RBP33,86■■■■□ 3,01
Upf3a-201ENSMUST00000043767 Caskin1Q6P9K8 1431 aa33,86■■■■□ 3,01
Upf3a-201ENSMUST00000043767 Col17a1Q07563 1470 aa33,86■■■■□ 3,01
Upf3a-201ENSMUST00000043767 Adgrl3Q80TS3 1537 aa33,85■■■■□ 3,01
Upf3a-201ENSMUST00000043767 Arid3cA6PWV5 409 aa33,85■■■■□ 3,01
Upf3a-201ENSMUST00000043767 NefmP08553 848 aa33,85■■■■□ 3,01
Upf3a-201ENSMUST00000043767 Fhad1A6PWD2 1420 aa33,84■■■■□ 3,01
Upf3a-201ENSMUST00000043767 Arhgap5P97393 1501 aa33,81■■■■□ 3
Upf3a-201ENSMUST00000043767 Mtus2Q3UHD3 1353 aa33,81■■■■□ 3
Upf3a-201ENSMUST00000043767 UacaQ8CGB3 1411 aa33,8■■■■□ 3
Upf3a-201ENSMUST00000043767 Rnf17Q99MV7 1640 aa33,8■■■■□ 3
Upf3a-201ENSMUST00000043767 Vps8Q0P5W1 1427 aa33,79■■■■□ 3
Upf3a-201ENSMUST00000043767 Cdk11bP24788 784 aaKnown RBP33,77■■■■□ 3
Upf3a-201ENSMUST00000043767 Trappc8E9PWG2 1437 aa33,71■■■□□ 2,99
Upf3a-201ENSMUST00000043767 Dennd4bQ3U1Y4 1499 aa33,71■■■□□ 2,99
Upf3a-201ENSMUST00000043767 Setbp1Q9Z180 1582 aa33,7■■■□□ 2,99
Upf3a-201ENSMUST00000043767 Gm32742A0A1B0GT42 1604 aa33,7■■■□□ 2,99
Upf3a-201ENSMUST00000043767 Il16O54824 1322 aa33,67■■■□□ 2,98
Upf3a-201ENSMUST00000043767 SphkapQ6NSW3 1687 aa33,67■■■□□ 2,98
Upf3a-201ENSMUST00000043767 Rfx7F8VPJ6 1459 aa33,66■■■□□ 2,98
Upf3a-201ENSMUST00000043767 Ak9G3UYQ4 1894 aa33,64■■■□□ 2,98
Upf3a-201ENSMUST00000043767 Kdm3bQ6ZPY7 1562 aa33,63■■■□□ 2,97
Upf3a-201ENSMUST00000043767 Adgrb2Q8CGM1 1561 aa33,63■■■□□ 2,97
Upf3a-201ENSMUST00000043767 Zfyve16Q80U44 1528 aa33,62■■■□□ 2,97
Upf3a-201ENSMUST00000043767 Eid3Q3V124 375 aa33,59■■■□□ 2,97
Upf3a-201ENSMUST00000043767 Pdcd11Q6NS46 1862 aaKnown RBP33,58■■■□□ 2,97
Upf3a-201ENSMUST00000043767 Cfap74Q3UY96 1578 aa33,58■■■□□ 2,97
Upf3a-201ENSMUST00000043767 Pprc1Q6NZN1 1644 aa33,58■■■□□ 2,97
Upf3a-201ENSMUST00000043767 Ube2uB1AUC4 352 aa33,56■■■□□ 2,96
Upf3a-201ENSMUST00000043767 NclP09405 707 aaKnown RBP33,56■■■□□ 2,96
Upf3a-201ENSMUST00000043767 Sart1Q9Z315 806 aaKnown RBP33,56■■■□□ 2,96
Upf3a-201ENSMUST00000043767 Abcc3B2RX12 1523 aa33,55■■■□□ 2,96
Upf3a-201ENSMUST00000043767 Zfp644E9QA22 1323 aa33,48■■■□□ 2,95
Upf3a-201ENSMUST00000043767 Abca9Q8K449 1623 aa33,48■■■□□ 2,95
Upf3a-201ENSMUST00000043767 Ccer2J3QPU5 274 aa33,47■■■□□ 2,95
Upf3a-201ENSMUST00000043767 Kidins220E9Q9B7 1793 aa33,47■■■□□ 2,95
Upf3a-201ENSMUST00000043767 Fmn2Q9JL04 1578 aa33,44■■■□□ 2,94
Upf3a-201ENSMUST00000043767 Cdc42bpbQ7TT50 1713 aa33,4■■■□□ 2,94
Upf3a-201ENSMUST00000043767 Rrp7aQ9D1C9 280 aaKnown RBP33,4■■■□□ 2,94
Upf3a-201ENSMUST00000043767 AlkP97793 1621 aa33,38■■■□□ 2,93
Upf3a-201ENSMUST00000043767 Ttbk1Q6PCN3 1308 aa33,37■■■□□ 2,93
Upf3a-201ENSMUST00000043767 Ppp1r18Q8BQ30 594 aa33,37■■■□□ 2,93
Upf3a-201ENSMUST00000043767 Hecw1Q8K4P8 1604 aa33,36■■■□□ 2,93
Upf3a-201ENSMUST00000043767 Depdc5P61460 1591 aa33,36■■■□□ 2,93
Upf3a-201ENSMUST00000043767 Clasp1Q80TV8 1535 aaKnown RBP33,36■■■□□ 2,93
Upf3a-201ENSMUST00000043767 Mast1Q9R1L5 1570 aa33,36■■■□□ 2,93
Upf3a-201ENSMUST00000043767 Adgrl2Q8JZZ7 1487 aa33,34■■■□□ 2,93
Upf3a-201ENSMUST00000043767 Fhod3Q76LL6 1578 aa33,33■■■□□ 2,93
Upf3a-201ENSMUST00000043767 Mphosph9A6H5Y1 991 aa33,3■■■□□ 2,92
Upf3a-201ENSMUST00000043767 Neurl4Q5NCX5 1563 aa33,29■■■□□ 2,92
Upf3a-201ENSMUST00000043767 Ankrd36D3Z4K0 1415 aa33,29■■■□□ 2,92
Upf3a-201ENSMUST00000043767 Map3k5O35099 1380 aa33,28■■■□□ 2,92
Upf3a-201ENSMUST00000043767 TonslQ6NZL6 1363 aa33,28■■■□□ 2,92
Upf3a-201ENSMUST00000043767 Lemd3Q9WU40 921 aa33,28■■■□□ 2,92
Upf3a-201ENSMUST00000043767 Ssh2Q5SW75 1423 aa33,26■■■□□ 2,91
Upf3a-201ENSMUST00000043767 AglF8VPN4 1532 aa33,23■■■□□ 2,91
Upf3a-201ENSMUST00000043767 Ttc37F8VPK0 1563 aa33,21■■■□□ 2,91
Upf3a-201ENSMUST00000043767 Prdm16A2A935 1275 aa33,2■■■□□ 2,91
Upf3a-201ENSMUST00000043767 Zbtb7cQ8VCZ7 619 aa33,18■■■□□ 2,9
Upf3a-201ENSMUST00000043767 Nup155Q99P88 1391 aaKnown RBP33,18■■■□□ 2,9
Upf3a-201ENSMUST00000043767 Trpm2Q91YD4 1506 aa33,18■■■□□ 2,9
Upf3a-201ENSMUST00000043767 Ttll5Q8CHB8 1328 aa33,16■■■□□ 2,9
Upf3a-201ENSMUST00000043767 Neurod1Q60867 357 aa33,15■■■□□ 2,9
Upf3a-201ENSMUST00000043767 Hspa5P20029 655 aaKnown RBP33,14■■■□□ 2,9
Upf3a-201ENSMUST00000043767 OvosQ3UU35 1456 aa33,14■■■□□ 2,9
Upf3a-201ENSMUST00000043767 Map4P27546 1125 aaKnown RBP33,11■■■□□ 2,89
Upf3a-201ENSMUST00000043767 Spag9Q58A65 1321 aaKnown RBP33,11■■■□□ 2,89
Upf3a-201ENSMUST00000043767 Supt6hQ62383 1726 aaKnown RBP33,09■■■□□ 2,89
Upf3a-201ENSMUST00000043767 Lamc1P02468 1607 aaKnown RBP33,09■■■□□ 2,89
Upf3a-201ENSMUST00000043767 Las1lA2BE28 776 aaKnown RBP33,07■■■□□ 2,88
Upf3a-201ENSMUST00000043767 Xrn1P97789 1719 aaKnown RBP33,06■■■□□ 2,88
Upf3a-201ENSMUST00000043767 Kdm5cP41230 1554 aa33,06■■■□□ 2,88
Upf3a-201ENSMUST00000043767 Nos1Q9Z0J4 1429 aa33,06■■■□□ 2,88
Upf3a-201ENSMUST00000043767 Pkd2O35245 966 aa33,06■■■□□ 2,88
Upf3a-201ENSMUST00000043767 Dnajc5P60904 198 aa33,05■■■□□ 2,88
Upf3a-201ENSMUST00000043767 Ptch1Q61115 1434 aa33,04■■■□□ 2,88
Upf3a-201ENSMUST00000043767 Trak1Q6PD31 939 aa33,04■■■□□ 2,88
Upf3a-201ENSMUST00000043767 Kif21bQ9QXL1 1668 aa33,01■■■□□ 2,87
Upf3a-201ENSMUST00000043767 Asxl1P59598 1514 aa33■■■□□ 2,87
Upf3a-201ENSMUST00000043767 Kiaa0556Q8C753 1610 aa32,98■■■□□ 2,87
Upf3a-201ENSMUST00000043767 Abca17E9PX95 1733 aa32,97■■■□□ 2,87
Upf3a-201ENSMUST00000043767 Clstn2Q9ER65 966 aa32,97■■■□□ 2,87
Upf3a-201ENSMUST00000043767 Sall2Q9QX96 1004 aa32,97■■■□□ 2,87
Upf3a-201ENSMUST00000043767 Atp10aO54827 1508 aa32,97■■■□□ 2,87
Upf3a-201ENSMUST00000043767 Usp54Q8BL06 1588 aaKnown RBP32,97■■■□□ 2,87
Retrieved 100 of 22,080 RNA–protein pairs in 11,9 ms