RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Kdm6bQ5NCY0 1641 aa34.02■■■■□ 3.04
Upf3a-201ENSMUST00000043767 Atp10dQ8K2X1 1416 aa34■■■■□ 3.03
Upf3a-201ENSMUST00000043767 AI481877A2ALV5 1481 aa34■■■■□ 3.03
Upf3a-201ENSMUST00000043767 Gm156Q58A37 223 aa33.99■■■■□ 3.03
Upf3a-201ENSMUST00000043767 Kiaa1210E9Q0C6 1637 aa33.99■■■■□ 3.03
Upf3a-201ENSMUST00000043767 Chic2Q9D9G3 165 aa33.99■■■■□ 3.03
Upf3a-201ENSMUST00000043767 Abcc5Q9R1X5 1436 aa33.95■■■■□ 3.03
Upf3a-201ENSMUST00000043767 Tdrd9Q14BI7 1383 aa33.94■■■■□ 3.02
Upf3a-201ENSMUST00000043767 Lrrc9Q8CDN9 1456 aa33.94■■■■□ 3.02
Upf3a-201ENSMUST00000043767 Mlh3A0A1Y7VMP7 1443 aa33.94■■■■□ 3.02
Upf3a-201ENSMUST00000043767 Wdr7Q920I9 1489 aa33.93■■■■□ 3.02
Upf3a-201ENSMUST00000043767 Abca8bQ8K440 1620 aa33.9■■■■□ 3.02
Upf3a-201ENSMUST00000043767 Mia2Q91ZV0 1396 aa33.87■■■■□ 3.01
Upf3a-201ENSMUST00000043767 Cabp1Q9JLK7 227 aa33.87■■■■□ 3.01
Upf3a-201ENSMUST00000043767 Plekhh2Q8C115 1491 aa33.87■■■■□ 3.01
Upf3a-201ENSMUST00000043767 Supt5hO55201 1082 aaKnown RBP33.86■■■■□ 3.01
Upf3a-201ENSMUST00000043767 Caskin1Q6P9K8 1431 aa33.86■■■■□ 3.01
Upf3a-201ENSMUST00000043767 Col17a1Q07563 1470 aa33.86■■■■□ 3.01
Upf3a-201ENSMUST00000043767 Adgrl3Q80TS3 1537 aa33.85■■■■□ 3.01
Upf3a-201ENSMUST00000043767 Arid3cA6PWV5 409 aa33.85■■■■□ 3.01
Upf3a-201ENSMUST00000043767 NefmP08553 848 aa33.85■■■■□ 3.01
Upf3a-201ENSMUST00000043767 Fhad1A6PWD2 1420 aa33.84■■■■□ 3.01
Upf3a-201ENSMUST00000043767 Arhgap5P97393 1501 aa33.81■■■■□ 3
Upf3a-201ENSMUST00000043767 Mtus2Q3UHD3 1353 aa33.81■■■■□ 3
Upf3a-201ENSMUST00000043767 UacaQ8CGB3 1411 aa33.8■■■■□ 3
Upf3a-201ENSMUST00000043767 Rnf17Q99MV7 1640 aa33.8■■■■□ 3
Upf3a-201ENSMUST00000043767 Vps8Q0P5W1 1427 aa33.79■■■■□ 3
Upf3a-201ENSMUST00000043767 Cdk11bP24788 784 aaKnown RBP33.77■■■■□ 3
Upf3a-201ENSMUST00000043767 Trappc8E9PWG2 1437 aa33.71■■■□□ 2.99
Upf3a-201ENSMUST00000043767 Dennd4bQ3U1Y4 1499 aa33.71■■■□□ 2.99
Upf3a-201ENSMUST00000043767 Setbp1Q9Z180 1582 aa33.7■■■□□ 2.99
Upf3a-201ENSMUST00000043767 Gm32742A0A1B0GT42 1604 aa33.7■■■□□ 2.99
Upf3a-201ENSMUST00000043767 Il16O54824 1322 aa33.67■■■□□ 2.98
Upf3a-201ENSMUST00000043767 SphkapQ6NSW3 1687 aa33.67■■■□□ 2.98
Upf3a-201ENSMUST00000043767 Rfx7F8VPJ6 1459 aa33.66■■■□□ 2.98
Upf3a-201ENSMUST00000043767 Ak9G3UYQ4 1894 aa33.64■■■□□ 2.98
Upf3a-201ENSMUST00000043767 Kdm3bQ6ZPY7 1562 aa33.63■■■□□ 2.97
Upf3a-201ENSMUST00000043767 Adgrb2Q8CGM1 1561 aa33.63■■■□□ 2.97
Upf3a-201ENSMUST00000043767 Zfyve16Q80U44 1528 aa33.62■■■□□ 2.97
Upf3a-201ENSMUST00000043767 Eid3Q3V124 375 aa33.59■■■□□ 2.97
Upf3a-201ENSMUST00000043767 Pdcd11Q6NS46 1862 aaKnown RBP33.58■■■□□ 2.97
Upf3a-201ENSMUST00000043767 Cfap74Q3UY96 1578 aa33.58■■■□□ 2.97
Upf3a-201ENSMUST00000043767 Pprc1Q6NZN1 1644 aa33.58■■■□□ 2.97
Upf3a-201ENSMUST00000043767 Ube2uB1AUC4 352 aa33.56■■■□□ 2.96
Upf3a-201ENSMUST00000043767 NclP09405 707 aaKnown RBP33.56■■■□□ 2.96
Upf3a-201ENSMUST00000043767 Sart1Q9Z315 806 aaKnown RBP33.56■■■□□ 2.96
Upf3a-201ENSMUST00000043767 Abcc3B2RX12 1523 aa33.55■■■□□ 2.96
Upf3a-201ENSMUST00000043767 Zfp644E9QA22 1323 aa33.48■■■□□ 2.95
Upf3a-201ENSMUST00000043767 Abca9Q8K449 1623 aa33.48■■■□□ 2.95
Upf3a-201ENSMUST00000043767 Ccer2J3QPU5 274 aa33.47■■■□□ 2.95
Upf3a-201ENSMUST00000043767 Kidins220E9Q9B7 1793 aa33.47■■■□□ 2.95
Upf3a-201ENSMUST00000043767 Fmn2Q9JL04 1578 aa33.44■■■□□ 2.94
Upf3a-201ENSMUST00000043767 Cdc42bpbQ7TT50 1713 aa33.4■■■□□ 2.94
Upf3a-201ENSMUST00000043767 Rrp7aQ9D1C9 280 aaKnown RBP33.4■■■□□ 2.94
Upf3a-201ENSMUST00000043767 AlkP97793 1621 aa33.38■■■□□ 2.93
Upf3a-201ENSMUST00000043767 Ttbk1Q6PCN3 1308 aa33.37■■■□□ 2.93
Upf3a-201ENSMUST00000043767 Ppp1r18Q8BQ30 594 aa33.37■■■□□ 2.93
Upf3a-201ENSMUST00000043767 Hecw1Q8K4P8 1604 aa33.36■■■□□ 2.93
Upf3a-201ENSMUST00000043767 Depdc5P61460 1591 aa33.36■■■□□ 2.93
Upf3a-201ENSMUST00000043767 Clasp1Q80TV8 1535 aaKnown RBP33.36■■■□□ 2.93
Upf3a-201ENSMUST00000043767 Mast1Q9R1L5 1570 aa33.36■■■□□ 2.93
Upf3a-201ENSMUST00000043767 Adgrl2Q8JZZ7 1487 aa33.34■■■□□ 2.93
Upf3a-201ENSMUST00000043767 Fhod3Q76LL6 1578 aa33.33■■■□□ 2.93
Upf3a-201ENSMUST00000043767 Mphosph9A6H5Y1 991 aa33.3■■■□□ 2.92
Upf3a-201ENSMUST00000043767 Neurl4Q5NCX5 1563 aa33.29■■■□□ 2.92
Upf3a-201ENSMUST00000043767 Ankrd36D3Z4K0 1415 aa33.29■■■□□ 2.92
Upf3a-201ENSMUST00000043767 Map3k5O35099 1380 aa33.28■■■□□ 2.92
Upf3a-201ENSMUST00000043767 TonslQ6NZL6 1363 aa33.28■■■□□ 2.92
Upf3a-201ENSMUST00000043767 Lemd3Q9WU40 921 aa33.28■■■□□ 2.92
Upf3a-201ENSMUST00000043767 Ssh2Q5SW75 1423 aa33.26■■■□□ 2.91
Upf3a-201ENSMUST00000043767 AglF8VPN4 1532 aa33.23■■■□□ 2.91
Upf3a-201ENSMUST00000043767 Ttc37F8VPK0 1563 aa33.21■■■□□ 2.91
Upf3a-201ENSMUST00000043767 Prdm16A2A935 1275 aa33.2■■■□□ 2.91
Upf3a-201ENSMUST00000043767 Zbtb7cQ8VCZ7 619 aa33.18■■■□□ 2.9
Upf3a-201ENSMUST00000043767 Nup155Q99P88 1391 aaKnown RBP33.18■■■□□ 2.9
Upf3a-201ENSMUST00000043767 Trpm2Q91YD4 1506 aa33.18■■■□□ 2.9
Upf3a-201ENSMUST00000043767 Ttll5Q8CHB8 1328 aa33.16■■■□□ 2.9
Upf3a-201ENSMUST00000043767 Neurod1Q60867 357 aa33.15■■■□□ 2.9
Upf3a-201ENSMUST00000043767 Hspa5P20029 655 aaKnown RBP33.14■■■□□ 2.9
Upf3a-201ENSMUST00000043767 OvosQ3UU35 1456 aa33.14■■■□□ 2.9
Upf3a-201ENSMUST00000043767 Map4P27546 1125 aaKnown RBP33.11■■■□□ 2.89
Upf3a-201ENSMUST00000043767 Spag9Q58A65 1321 aaKnown RBP33.11■■■□□ 2.89
Upf3a-201ENSMUST00000043767 Supt6hQ62383 1726 aaKnown RBP33.09■■■□□ 2.89
Upf3a-201ENSMUST00000043767 Lamc1P02468 1607 aaKnown RBP33.09■■■□□ 2.89
Upf3a-201ENSMUST00000043767 Las1lA2BE28 776 aaKnown RBP33.07■■■□□ 2.88
Upf3a-201ENSMUST00000043767 Xrn1P97789 1719 aaKnown RBP33.06■■■□□ 2.88
Upf3a-201ENSMUST00000043767 Kdm5cP41230 1554 aa33.06■■■□□ 2.88
Upf3a-201ENSMUST00000043767 Nos1Q9Z0J4 1429 aa33.06■■■□□ 2.88
Upf3a-201ENSMUST00000043767 Pkd2O35245 966 aa33.06■■■□□ 2.88
Upf3a-201ENSMUST00000043767 Dnajc5P60904 198 aa33.05■■■□□ 2.88
Upf3a-201ENSMUST00000043767 Ptch1Q61115 1434 aa33.04■■■□□ 2.88
Upf3a-201ENSMUST00000043767 Trak1Q6PD31 939 aa33.04■■■□□ 2.88
Upf3a-201ENSMUST00000043767 Kif21bQ9QXL1 1668 aa33.01■■■□□ 2.87
Upf3a-201ENSMUST00000043767 Asxl1P59598 1514 aa33■■■□□ 2.87
Upf3a-201ENSMUST00000043767 Kiaa0556Q8C753 1610 aa32.98■■■□□ 2.87
Upf3a-201ENSMUST00000043767 Abca17E9PX95 1733 aa32.97■■■□□ 2.87
Upf3a-201ENSMUST00000043767 Clstn2Q9ER65 966 aa32.97■■■□□ 2.87
Upf3a-201ENSMUST00000043767 Sall2Q9QX96 1004 aa32.97■■■□□ 2.87
Upf3a-201ENSMUST00000043767 Atp10aO54827 1508 aa32.97■■■□□ 2.87
Upf3a-201ENSMUST00000043767 Usp54Q8BL06 1588 aaKnown RBP32.97■■■□□ 2.87
Retrieved 100 of 22,080 RNA–protein pairs in 12.2 ms