RNA–Protein interactions for RNA: ENSMUST00000028003.8

Lmx1a-201, Transcript of LIM homeobox transcription factor 1-alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lmx1a, Length 3,347 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1a-201ENSMUST00000028003 Gab3Q8BSM5 595 aa12.18□□□□□ -0.46
Lmx1a-201ENSMUST00000028003 Mapkbp1Q6NS57 1503 aa12.17□□□□□ -0.46
Lmx1a-201ENSMUST00000028003 Lrrc9Q8CDN9 1456 aa12.17□□□□□ -0.46
Lmx1a-201ENSMUST00000028003 NrdcQ8BHG1 1161 aa12.17□□□□□ -0.46
Lmx1a-201ENSMUST00000028003 Ncoa2Q61026 1462 aa12.15□□□□□ -0.46
Lmx1a-201ENSMUST00000028003 Zfyve16Q80U44 1528 aa12.15□□□□□ -0.46
Lmx1a-201ENSMUST00000028003 Ccdc141E9Q8Q6 1531 aa12.15□□□□□ -0.46
Lmx1a-201ENSMUST00000028003 BlmO88700 1416 aa12.14□□□□□ -0.47
Lmx1a-201ENSMUST00000028003 Ppp1r18Q8BQ30 594 aa12.14□□□□□ -0.47
Lmx1a-201ENSMUST00000028003 AglF8VPN4 1532 aa12.13□□□□□ -0.47
Lmx1a-201ENSMUST00000028003 Ap3b1Q9Z1T1 1105 aa12.13□□□□□ -0.47
Lmx1a-201ENSMUST00000028003 Gtf3c3Q3TMP1 882 aa12.12□□□□□ -0.47
Lmx1a-201ENSMUST00000028003 Arhgap31A6X8Z5 1425 aa12.11□□□□□ -0.47
Lmx1a-201ENSMUST00000028003 Cul7Q8VE73 1689 aa12.11□□□□□ -0.47
Lmx1a-201ENSMUST00000028003 Ankrd26Q811D2 1581 aa12.11□□□□□ -0.47
Lmx1a-201ENSMUST00000028003 Erich3F6QRE9 1637 aa12.1□□□□□ -0.47
Lmx1a-201ENSMUST00000028003 UbtfP25976 765 aaKnown RBP12.1□□□□□ -0.47
Lmx1a-201ENSMUST00000028003 Rapgef6Q5NCJ1 1609 aa12.09□□□□□ -0.47
Lmx1a-201ENSMUST00000028003 Gcc2Q8CHG3 1679 aa12.09□□□□□ -0.47
Lmx1a-201ENSMUST00000028003 TonslQ6NZL6 1363 aa12.09□□□□□ -0.47
Lmx1a-201ENSMUST00000028003 Plcd4Q8K3R3 807 aa12.08□□□□□ -0.48
Lmx1a-201ENSMUST00000028003 Fancd2Q80V62 1450 aa12.08□□□□□ -0.48
Lmx1a-201ENSMUST00000028003 Abca8bQ8K440 1620 aa12.07□□□□□ -0.48
Lmx1a-201ENSMUST00000028003 Upf2A2AT37 1269 aaKnown RBP12.07□□□□□ -0.48
Lmx1a-201ENSMUST00000028003 Atp10dQ8K2X1 1416 aa12.07□□□□□ -0.48
Lmx1a-201ENSMUST00000028003 Nolc1E9Q5C9 702 aaKnown RBP12.06□□□□□ -0.48
Lmx1a-201ENSMUST00000028003 Arap1Q4LDD4 1452 aa12.05□□□□□ -0.48
Lmx1a-201ENSMUST00000028003 Dhx57Q6P5D3 1388 aaKnown RBP12.04□□□□□ -0.48
Lmx1a-201ENSMUST00000028003 Lmo7E9PYF4 1699 aaKnown RBP12.04□□□□□ -0.48
Lmx1a-201ENSMUST00000028003 Irx3P81067 507 aa12.04□□□□□ -0.48
Lmx1a-201ENSMUST00000028003 Mroh2aD3Z750 1679 aa12.03□□□□□ -0.48
Lmx1a-201ENSMUST00000028003 Depdc5P61460 1591 aa12.03□□□□□ -0.48
Lmx1a-201ENSMUST00000028003 Fam163aQ8CAA5 168 aa12.03□□□□□ -0.48
Lmx1a-201ENSMUST00000028003 Supt16hQ920B9 1047 aa12.03□□□□□ -0.48
Lmx1a-201ENSMUST00000028003 Magi1Q6RHR9 1471 aa12.02□□□□□ -0.48
Lmx1a-201ENSMUST00000028003 Aebp1Q640N1 1128 aa12.02□□□□□ -0.49
Lmx1a-201ENSMUST00000028003 Kif27Q7M6Z4 1394 aa12.02□□□□□ -0.49
Lmx1a-201ENSMUST00000028003 Stra8P70278 393 aa12.01□□□□□ -0.49
Lmx1a-201ENSMUST00000028003 Ncapd3Q6ZQK0 1506 aa12.01□□□□□ -0.49
Lmx1a-201ENSMUST00000028003 Ccdc9Q8VC31 543 aaKnown RBP12.01□□□□□ -0.49
Lmx1a-201ENSMUST00000028003 Eea1Q8BL66 1411 aa12□□□□□ -0.49
Lmx1a-201ENSMUST00000028003 Znf608Q56A10 1511 aa12□□□□□ -0.49
Lmx1a-201ENSMUST00000028003 Calr4Q3TQS0 420 aa11.99□□□□□ -0.49
Lmx1a-201ENSMUST00000028003 Fndc1E9Q043 1732 aa11.98□□□□□ -0.49
Lmx1a-201ENSMUST00000028003 Ccdc27Q3V036 639 aa11.98□□□□□ -0.49
Lmx1a-201ENSMUST00000028003 Kiaa0556Q8C753 1610 aa11.97□□□□□ -0.49
Lmx1a-201ENSMUST00000028003 Setd5Q5XJV7 1441 aa11.97□□□□□ -0.49
Lmx1a-201ENSMUST00000028003 Alpk3Q924C5 1678 aa11.96□□□□□ -0.49
Lmx1a-201ENSMUST00000028003 Arid3cA6PWV5 409 aa11.96□□□□□ -0.5
Lmx1a-201ENSMUST00000028003 CntlnA2AM05 1397 aa11.95□□□□□ -0.5
Lmx1a-201ENSMUST00000028003 Fam208aQ69ZR9 1610 aaKnown RBP11.95□□□□□ -0.5
Lmx1a-201ENSMUST00000028003 Fkbp15Q6P9Q6 1216 aaKnown RBP11.95□□□□□ -0.5
Lmx1a-201ENSMUST00000028003 Kiaa1551Q5DTW7 1521 aa11.95□□□□□ -0.5
Lmx1a-201ENSMUST00000028003 Peg3Q3URU2 1571 aa11.95□□□□□ -0.5
Lmx1a-201ENSMUST00000028003 Rnf17Q99MV7 1640 aa11.94□□□□□ -0.5
Lmx1a-201ENSMUST00000028003 Myt1lP97500 1187 aa11.94□□□□□ -0.5
Lmx1a-201ENSMUST00000028003 A2mQ6GQT1 1474 aa11.94□□□□□ -0.5
Lmx1a-201ENSMUST00000028003 Pcf11G3X9Z4 1553 aa11.94□□□□□ -0.5
Lmx1a-201ENSMUST00000028003 Synj2Q9D2G5 1434 aa11.92□□□□□ -0.5
Lmx1a-201ENSMUST00000028003 Ppp4r2Q0VGB7 417 aa11.91□□□□□ -0.5
Lmx1a-201ENSMUST00000028003 Mug1P28665 1476 aa11.91□□□□□ -0.5
Lmx1a-201ENSMUST00000028003 4933416C03RikQ3V063 378 aa11.91□□□□□ -0.5
Lmx1a-201ENSMUST00000028003 Plekhg3Q4VAC9 1341 aa11.9□□□□□ -0.5
Lmx1a-201ENSMUST00000028003 Mlh3A0A1Y7VMP7 1443 aa11.9□□□□□ -0.5
Lmx1a-201ENSMUST00000028003 Ncoa3O09000 1398 aa11.89□□□□□ -0.51
Lmx1a-201ENSMUST00000028003 Prex2Q3LAC4 1598 aa11.89□□□□□ -0.51
Lmx1a-201ENSMUST00000028003 Hsp90aa1P07901 733 aaKnown RBP11.89□□□□□ -0.51
Lmx1a-201ENSMUST00000028003 Cdc42bpaQ3UU96 1719 aa11.89□□□□□ -0.51
Lmx1a-201ENSMUST00000028003 Hecw2Q6I6G8 1578 aa11.88□□□□□ -0.51
Lmx1a-201ENSMUST00000028003 Abca9Q8K449 1623 aa11.87□□□□□ -0.51
Lmx1a-201ENSMUST00000028003 Wdr43Q6ZQL4 677 aaKnown RBP11.85□□□□□ -0.51
Lmx1a-201ENSMUST00000028003 Ipo4Q8VI75 1082 aa11.85□□□□□ -0.51
Lmx1a-201ENSMUST00000028003 Cfap74Q3UY96 1578 aa11.85□□□□□ -0.51
Lmx1a-201ENSMUST00000028003 Naip2Q9QUK4 1447 aa11.84□□□□□ -0.51
Lmx1a-201ENSMUST00000028003 Znf710Q3U288 666 aa11.84□□□□□ -0.51
Lmx1a-201ENSMUST00000028003 Gm1043A0A140LJC2 1431 aa11.83□□□□□ -0.52
Lmx1a-201ENSMUST00000028003 Kif14L0N7N1 1674 aaKnown RBP11.82□□□□□ -0.52
Lmx1a-201ENSMUST00000028003 Caskin1Q6P9K8 1431 aa11.82□□□□□ -0.52
Lmx1a-201ENSMUST00000028003 Pdcd11Q6NS46 1862 aaKnown RBP11.82□□□□□ -0.52
Lmx1a-201ENSMUST00000028003 Zmym4A2A791 1549 aaKnown RBP11.82□□□□□ -0.52
Lmx1a-201ENSMUST00000028003 Kdm6bQ5NCY0 1641 aa11.81□□□□□ -0.52
Lmx1a-201ENSMUST00000028003 Kdm5cP41230 1554 aa11.8□□□□□ -0.52
Lmx1a-201ENSMUST00000028003 Abcc3B2RX12 1523 aa11.79□□□□□ -0.52
Lmx1a-201ENSMUST00000028003 OvosQ3UU35 1456 aa11.79□□□□□ -0.52
Lmx1a-201ENSMUST00000028003 Tiam1Q60610 1591 aa11.78□□□□□ -0.52
Lmx1a-201ENSMUST00000028003 Atp10aO54827 1508 aa11.78□□□□□ -0.52
Lmx1a-201ENSMUST00000028003 Arhgap5P97393 1501 aa11.78□□□□□ -0.52
Lmx1a-201ENSMUST00000028003 DaxxO35613 739 aa11.78□□□□□ -0.52
Lmx1a-201ENSMUST00000028003 Slc24a1Q91WD8 1130 aa11.78□□□□□ -0.52
Lmx1a-201ENSMUST00000028003 Lmtk2Q3TYD6 1471 aa11.77□□□□□ -0.52
Lmx1a-201ENSMUST00000028003 Naip1Q9QWK5 1403 aa11.77□□□□□ -0.53
Lmx1a-201ENSMUST00000028003 Camsap2Q8C1B1 1461 aa11.77□□□□□ -0.53
Lmx1a-201ENSMUST00000028003 NexmifQ5DTT1 1515 aa11.76□□□□□ -0.53
Lmx1a-201ENSMUST00000028003 Gm32742A0A1B0GT42 1604 aa11.76□□□□□ -0.53
Lmx1a-201ENSMUST00000028003 Kidins220E9Q9B7 1793 aa11.75□□□□□ -0.53
Lmx1a-201ENSMUST00000028003 Pak3Q61036 559 aa11.75□□□□□ -0.53
Lmx1a-201ENSMUST00000028003 Lemd3Q9WU40 921 aa11.74□□□□□ -0.53
Lmx1a-201ENSMUST00000028003 Hecw1Q8K4P8 1604 aa11.73□□□□□ -0.53
Lmx1a-201ENSMUST00000028003 Eif5bQ05D44 1216 aaKnown RBP11.72□□□□□ -0.53
Lmx1a-201ENSMUST00000028003 Neurl4Q5NCX5 1563 aa11.72□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 8.7 ms