RNA–Protein interactions for RNA: snR43

snR43, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR43, Length 209 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR43snR43 AAD15Q08361 143 aa2.52□□□□□ -2.01
snR43snR43 KCS1Q12494 1050 aa2.52□□□□□ -2.01
snR43snR43 HSH49Q99181 213 aaPredicted RBP2.52□□□□□ -2.01
snR43snR43 YLR358CO13565 187 aa2.51□□□□□ -2.01
snR43snR43 BCY1P07278 416 aaKnown RBP2.51□□□□□ -2.01
snR43snR43 ILS1P09436 1072 aaKnown RBP2.51□□□□□ -2.01
snR43snR43 HOM3P10869 527 aa2.51□□□□□ -2.01
snR43snR43 FUR1P18562 216 aaKnown RBP2.51□□□□□ -2.01
snR43snR43 HOP1P20050 605 aa2.51□□□□□ -2.01
snR43snR43 SED4P25365 1065 aa2.51□□□□□ -2.01
snR43snR43 DBF4P32325 704 aa2.51□□□□□ -2.01
snR43snR43 IMP3P32899 183 aaPredicted RBP2.51□□□□□ -2.01
snR43snR43 SPC29P33419 253 aa2.51□□□□□ -2.01
snR43snR43 CTF13P35203 478 aa2.51□□□□□ -2.01
snR43snR43 BLI1P35727 113 aa2.51□□□□□ -2.01
snR43snR43 FMP46P36141 133 aaKnown RBP2.51□□□□□ -2.01
snR43snR43 JNM1P36224 373 aa2.51□□□□□ -2.01
snR43snR43 MRPL15P36523 253 aa2.51□□□□□ -2.01
snR43snR43 LDB7P38210 180 aa2.51□□□□□ -2.01
snR43snR43 DIA4P38705 446 aaPredicted RBP2.51□□□□□ -2.01
snR43snR43 GND1P38720 489 aaKnown RBP2.51□□□□□ -2.01
snR43snR43 SMC2P38989 1170 aaKnown RBP2.51□□□□□ -2.01
snR43snR43 MPT5P39016 859 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
snR43snR43 DHH1P39517 506 aaKnown RBP2.51□□□□□ -2.01
snR43snR43 MGS1P40151 587 aa2.51□□□□□ -2.01
snR43snR43 TES1P41903 349 aaKnown RBP2.51□□□□□ -2.01
snR43snR43 YFR020WP43600 232 aa2.51□□□□□ -2.01
snR43snR43 ARE2P53629 642 aaKnown RBP2.51□□□□□ -2.01
snR43snR43 YNL092WP53934 400 aa2.51□□□□□ -2.01
snR43snR43 ECM9Q02202 377 aa2.51□□□□□ -2.01
snR43snR43 UME1Q03010 460 aa2.51□□□□□ -2.01
snR43snR43 ARX1Q03862 593 aaKnown RBP2.51□□□□□ -2.01
snR43snR43 YDR514CQ04408 483 aa2.51□□□□□ -2.01
snR43snR43 RSF1Q05043 376 aa2.51□□□□□ -2.01
snR43snR43 ASM4Q05166 528 aa2.51□□□□□ -2.01
snR43snR43 RRP45Q05636 305 aaKnown RBP2.51□□□□□ -2.01
snR43snR43 BLS1Q06071 122 aa2.51□□□□□ -2.01
snR43snR43 RSC3Q06639 885 aa2.51□□□□□ -2.01
snR43snR43 YLR001CQ07895 862 aa2.51□□□□□ -2.01
snR43snR43 NRT1Q08485 598 aa2.51□□□□□ -2.01
snR43snR43 UPC2Q12151 913 aa2.51□□□□□ -2.01
snR43snR43 LEU9Q12166 604 aaKnown RBP2.51□□□□□ -2.01
snR43snR43 YOL107WQ12239 342 aa2.51□□□□□ -2.01
snR43snR43 GTT2Q12390 233 aa2.51□□□□□ -2.01
snR43snR43 CDC9P04819 755 aa2.5□□□□□ -2.01
snR43snR43 RAD10P06838 210 aa2.5□□□□□ -2.01
snR43snR43 GAL7P08431 366 aa2.5□□□□□ -2.01
snR43snR43 PHO13P19881 312 aa2.5□□□□□ -2.01
snR43snR43 SLY1P22213 666 aa2.5□□□□□ -2.01
snR43snR43 KAR4P25583 335 aa2.5□□□□□ -2.01
snR43snR43 CTS1P29029 562 aa2.5□□□□□ -2.01
snR43snR43 SEC65P29478 273 aa2.5□□□□□ -2.01
snR43snR43 MRPL9P31334 269 aa2.5□□□□□ -2.01
snR43snR43 PET309P32522 965 aaPredicted RBP2.5□□□□□ -2.01
snR43snR43 TRM7P38238 310 aaKnown RBP2.5□□□□□ -2.01
snR43snR43 FTH1P38310 465 aa2.5□□□□□ -2.01
snR43snR43 FLC2P39719 783 aa2.5□□□□□ -2.01
snR43snR43 SER3P40054 469 aa2.5□□□□□ -2.01
snR43snR43 RGI2P40188 164 aa2.5□□□□□ -2.01
snR43snR43 SEC24P40482 926 aaKnown RBP2.5□□□□□ -2.01
snR43snR43 IME4P41833 600 aa2.5□□□□□ -2.01
snR43snR43 TFG2P41896 400 aaPredicted RBP2.5□□□□□ -2.01
snR43snR43 SHR5P41912 237 aa2.5□□□□□ -2.01
snR43snR43 ELP2P42935 788 aa2.5□□□□□ -2.01
snR43snR43 CHA4P43634 648 aa2.5□□□□□ -2.01
snR43snR43 RPC17P47076 161 aa2.5□□□□□ -2.01
snR43snR43 YPR003CP53394 754 aa2.5□□□□□ -2.01
snR43snR43 ALG12P53730 551 aa2.5□□□□□ -2.01
snR43snR43 NOG2P53742 486 aaKnown RBP2.5□□□□□ -2.01
snR43snR43 EFM6P53970 246 aa2.5□□□□□ -2.01
snR43snR43 SLU7Q02775 382 aaKnown RBP2.5□□□□□ -2.01
snR43snR43 RLI1Q03195 608 aaKnown RBP2.5□□□□□ -2.01
snR43snR43 CTK1Q03957 528 aaKnown RBP2.5□□□□□ -2.01
snR43snR43 RCO1Q04779 684 aa2.5□□□□□ -2.01
snR43snR43 GAD1Q04792 585 aa2.5□□□□□ -2.01
snR43snR43 YLR287CQ05881 355 aa2.5□□□□□ -2.01
snR43snR43 REH1Q06709 432 aa2.5□□□□□ -2.01
snR43snR43 GRS2Q06817 618 aa2.5□□□□□ -2.01
snR43snR43 NOP12Q08208 459 aaKnown RBP2.5□□□□□ -2.01
snR43snR43 NTG2Q08214 380 aa2.5□□□□□ -2.01
snR43snR43 IRC13Q08630 104 aa2.5□□□□□ -2.01
snR43snR43 YLR125WQ12138 136 aa2.5□□□□□ -2.01
snR43snR43 YLL056CQ12177 298 aa2.5□□□□□ -2.01
snR43snR43 YOR012WQ12351 137 aa2.5□□□□□ -2.01
snR43snR43 LAS17Q12446 633 aa2.5□□□□□ -2.01
snR43snR43 LAG2Q92325 660 aa2.5□□□□□ -2.01
snR43snR43 Q0142Q9ZZW4 58 aa2.5□□□□□ -2.01
snR43snR43 UBR1P19812 1950 aa2.49□□□□□ -2.01
snR43snR43 SEM1O94742 89 aa2.49□□□□□ -2.01
snR43snR43 COX1P00401 534 aa2.49□□□□□ -2.01
snR43snR43 YPT1P01123 206 aaKnown RBP2.49□□□□□ -2.01
snR43snR43 RPL7AP05737 244 aaKnown RBP2.49□□□□□ -2.01
snR43snR43 FUM1P08417 488 aaKnown RBP2.49□□□□□ -2.01
snR43snR43 KAR1P11927 433 aa2.49□□□□□ -2.01
snR43snR43 PMS1P14242 873 aa2.49□□□□□ -2.01
snR43snR43 SPO12P17123 173 aa2.49□□□□□ -2.01
snR43snR43 PRP4P20053 465 aaKnown RBP2.49□□□□□ -2.01
snR43snR43 BUB3P26449 341 aa2.49□□□□□ -2.01
snR43snR43 MSP1P28737 362 aa2.49□□□□□ -2.01
snR43snR43 HEM12P32347 362 aaPredicted RBP2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms