RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B RSM23Q01163 450 aa0.49□□□□□ -2.33
snR39BsnR39B TY2A-DR2Q03483 438 aa0.49□□□□□ -2.33
snR39BsnR39B YKU80Q04437 629 aa0.49□□□□□ -2.33
snR39BsnR39B CTI6Q08923 506 aa0.49□□□□□ -2.33
snR39BsnR39B LEU9Q12166 604 aaKnown RBP0.49□□□□□ -2.33
snR39BsnR39B NCE102Q12207 173 aaRIP-Chip data0.49□□□□□ -2.33not detected
snR39BsnR39B TY2A-BQ12260 438 aa0.49□□□□□ -2.33
snR39BsnR39B TY2A-OR2Q12293 438 aa0.49□□□□□ -2.33
snR39BsnR39B TY2A-DR1Q12392 438 aa0.49□□□□□ -2.33
snR39BsnR39B TY2A-OR1Q12439 438 aa0.49□□□□□ -2.33
snR39BsnR39B TY2A-DR3Q99303 438 aa0.49□□□□□ -2.33
snR39BsnR39B SUC2P00724 532 aa0.48□□□□□ -2.33
snR39BsnR39B PIF1P07271 859 aa0.48□□□□□ -2.33
snR39BsnR39B MAS2P11914 482 aa0.48□□□□□ -2.33
snR39BsnR39B YCK1P23291 538 aa0.48□□□□□ -2.33
snR39BsnR39B BUD5P25300 642 aaPredicted RBP0.48□□□□□ -2.33
snR39BsnR39B NDI1P32340 513 aa0.48□□□□□ -2.33
snR39BsnR39B NPL6P32832 435 aa0.48□□□□□ -2.33
snR39BsnR39B YKL100CP34248 587 aa0.48□□□□□ -2.33
snR39BsnR39B DTR1P38125 572 aa0.48□□□□□ -2.33
snR39BsnR39B MIX23P38162 196 aa0.48□□□□□ -2.33
snR39BsnR39B FAU1P40099 211 aa0.48□□□□□ -2.33
snR39BsnR39B PUG1P40100 303 aa0.48□□□□□ -2.33
snR39BsnR39B PFK26P40433 827 aaKnown RBP0.48□□□□□ -2.33
snR39BsnR39B PEX14P53112 341 aa0.48□□□□□ -2.33
snR39BsnR39B OGG1P53397 376 aaPredicted RBP0.48□□□□□ -2.33
snR39BsnR39B GOR1P53839 350 aa0.48□□□□□ -2.33
snR39BsnR39B CWC25P53854 179 aaKnown RBP0.48□□□□□ -2.33
snR39BsnR39B TEP1P53916 434 aa0.48□□□□□ -2.33
snR39BsnR39B YPL107WQ02873 248 aa0.48□□□□□ -2.33
snR39BsnR39B APC2Q12440 853 aa0.48□□□□□ -2.33
snR39BsnR39B YOR019WQ99248 730 aa0.48□□□□□ -2.33
snR39BsnR39B VCX1Q99385 411 aa0.48□□□□□ -2.33
snR39BsnR39B TY1B-AO13527 1196 aaKnown RBP0.47□□□□□ -2.33
snR39BsnR39B NPR3P38742 1146 aa0.47□□□□□ -2.33
snR39BsnR39B SEC24P40482 926 aaKnown RBP0.47□□□□□ -2.33
snR39BsnR39B NCA3P46955 337 aa0.47□□□□□ -2.33
snR39BsnR39B GPI1P53306 609 aa0.47□□□□□ -2.33
snR39BsnR39B HEF3P53978 1044 aaKnown RBP0.47□□□□□ -2.33
snR39BsnR39B TGL2P54857 326 aa0.47□□□□□ -2.33
snR39BsnR39B MSC1Q03104 513 aa0.47□□□□□ -2.33
snR39BsnR39B SSP2Q08646 371 aa0.47□□□□□ -2.33
snR39BsnR39B YPL199CQ08954 240 aa0.47□□□□□ -2.33
snR39BsnR39B YBR085C-AO43137 85 aa0.46□□□□□ -2.34
snR39BsnR39B CBP6P07253 162 aaPredicted RBP0.46□□□□□ -2.34
snR39BsnR39B SYN8P31377 255 aa0.46□□□□□ -2.34
snR39BsnR39B DPH2P32461 534 aa0.46□□□□□ -2.34
snR39BsnR39B GLC7P32598 312 aaKnown RBP0.46□□□□□ -2.34
snR39BsnR39B PTK1P36002 662 aaPredicted RBP0.46□□□□□ -2.34
snR39BsnR39B YNG2P38806 282 aaKnown RBP0.46□□□□□ -2.34
snR39BsnR39B FPR3P38911 411 aaKnown RBP0.46□□□□□ -2.34
snR39BsnR39B PSD1P39006 500 aa0.46□□□□□ -2.34
snR39BsnR39B RIC1P40395 1056 aa0.46□□□□□ -2.34
snR39BsnR39B IST3P40565 148 aaPredicted RBP0.46□□□□□ -2.34
snR39BsnR39B SSU1P41930 458 aa0.46□□□□□ -2.34
snR39BsnR39B AVT4P50944 713 aa0.46□□□□□ -2.34
snR39BsnR39B YGR127WP53275 312 aa0.46□□□□□ -2.34
snR39BsnR39B TEN1Q07921 160 aa0.46□□□□□ -2.34
snR39BsnR39B PSK2Q08217 1101 aa0.46□□□□□ -2.34
snR39BsnR39B YOR365CQ08844 703 aa0.46□□□□□ -2.34
snR39BsnR39B COX17Q12287 69 aa0.46□□□□□ -2.34
snR39BsnR39B RAD52P06778 471 aaKnown RBP0.45□□□□□ -2.34
snR39BsnR39B ERG8P24521 451 aa0.45□□□□□ -2.34
snR39BsnR39B CLB4P24871 460 aa0.45□□□□□ -2.34
snR39BsnR39B ADH7P25377 361 aa0.45□□□□□ -2.34
snR39BsnR39B REC114P32841 428 aa0.45□□□□□ -2.34
snR39BsnR39B YME2P32843 850 aa0.45□□□□□ -2.34
snR39BsnR39B YPT35P38815 214 aaKnown RBP0.45□□□□□ -2.34
snR39BsnR39B YHR210CP38893 341 aa0.45□□□□□ -2.34
snR39BsnR39B AIM10P39965 576 aaKnown RBP0.45□□□□□ -2.34
snR39BsnR39B BUR6P40096 142 aa0.45□□□□□ -2.34
snR39BsnR39B PTR3P43606 678 aa0.45□□□□□ -2.34
snR39BsnR39B DLD2P46681 530 aaKnown RBP0.45□□□□□ -2.34
snR39BsnR39B SSN8P47821 323 aa0.45□□□□□ -2.34
snR39BsnR39B DIA3P52290 468 aa0.45□□□□□ -2.34
snR39BsnR39B COG1P53079 417 aa0.45□□□□□ -2.34
snR39BsnR39B POP6P53218 158 aa0.45□□□□□ -2.34
snR39BsnR39B INA17Q02888 182 aa0.45□□□□□ -2.34
snR39BsnR39B ECM7Q06200 448 aa0.45□□□□□ -2.34
snR39BsnR39B PHO92Q06390 306 aa0.45□□□□□ -2.34
snR39BsnR39B NDE2Q07500 545 aa0.45□□□□□ -2.34
snR39BsnR39B NUS1Q12063 375 aa0.45□□□□□ -2.34
snR39BsnR39B RAX2Q12465 1220 aa0.45□□□□□ -2.34
snR39BsnR39B BEM2P39960 2167 aaKnown RBP0.45□□□□□ -2.34
snR39BsnR39B TPK1P06244 397 aa0.44□□□□□ -2.34
snR39BsnR39B MSS18P08593 268 aa0.44□□□□□ -2.34
snR39BsnR39B POP5P28005 173 aa0.44□□□□□ -2.34
snR39BsnR39B MFT1P33441 392 aaKnown RBP0.44□□□□□ -2.34
snR39BsnR39B SPT10P35208 640 aa0.44□□□□□ -2.34
snR39BsnR39B FRE2P36033 711 aa0.44□□□□□ -2.34
snR39BsnR39B SEC9P40357 651 aa0.44□□□□□ -2.34
snR39BsnR39B IME4P41833 600 aa0.44□□□□□ -2.34
snR39BsnR39B YFL012WP43580 148 aa0.44□□□□□ -2.34
snR39BsnR39B DSD1P53095 428 aa0.44□□□□□ -2.34
snR39BsnR39B YGR126WP53274 230 aa0.44□□□□□ -2.34
snR39BsnR39B MTM1P53320 366 aa0.44□□□□□ -2.34
snR39BsnR39B PDS5Q04264 1277 aa0.44□□□□□ -2.34
snR39BsnR39B TFC6Q06339 672 aa0.44□□□□□ -2.34
snR39BsnR39B PLP2Q12017 286 aa0.44□□□□□ -2.34
snR39BsnR39B RKM5Q12367 367 aa0.44□□□□□ -2.34
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms