RNA–Protein interactions for RNA: YOR009W

TIR4, Transcript of Cell wall mannoprotein, yeast

Gene TIR4, Length 1,464 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIR4	YOR009W	NUP85	P46673	744 aa		11.8	□□□□□ -0.52
TIR4	YOR009W	YJR030C	P47101	745 aa		11.8	□□□□□ -0.52
TIR4	YOR009W	BIR1	P47134	954 aa		11.8	□□□□□ -0.52
TIR4	YOR009W	FAA4	P47912	694 aa	Known RBP	11.8	□□□□□ -0.52
TIR4	YOR009W	CWC24	P53769	259 aa		11.8	□□□□□ -0.52
TIR4	YOR009W	MPS1	P54199	764 aa		11.8	□□□□□ -0.52
TIR4	YOR009W	HSP31	Q04432	237 aa		11.8	□□□□□ -0.52
TIR4	YOR009W	ATG26	Q06321	1198 aa		11.8	□□□□□ -0.52
TIR4	YOR009W	NSL1	Q12143	216 aa		11.8	□□□□□ -0.52
TIR4	YOR009W	YPR011C	Q12251	326 aa		11.8	□□□□□ -0.52
TIR4	YOR009W	YCL012C	Q8J0M4	134 aa		11.8	□□□□□ -0.52
TIR4	YOR009W	SRN2	Q99176	213 aa		11.8	□□□□□ -0.52
TIR4	YOR009W	HTA2	P04912	132 aa		11.79	□□□□□ -0.52
TIR4	YOR009W	TPK2	P06245	380 aa		11.79	□□□□□ -0.52
TIR4	YOR009W	CSM1	P25651	190 aa		11.79	□□□□□ -0.52
TIR4	YOR009W	SIN4	P32259	974 aa		11.79	□□□□□ -0.52
TIR4	YOR009W	EMC3	P36039	253 aa		11.79	□□□□□ -0.52
TIR4	YOR009W	BMT2	P38278	337 aa		11.79	□□□□□ -0.52
TIR4	YOR009W	GIM4	P40005	111 aa	Known RBP	11.79	□□□□□ -0.52
TIR4	YOR009W	MTR3	P48240	250 aa	Predicted RBP	11.79	□□□□□ -0.52
TIR4	YOR009W	MDM34	P53083	459 aa		11.79	□□□□□ -0.52
TIR4	YOR009W	YNL260C	P53846	198 aa		11.79	□□□□□ -0.52
TIR4	YOR009W	YPL113C	Q02961	396 aa		11.79	□□□□□ -0.52
TIR4	YOR009W	ROT1	Q03691	256 aa		11.79	□□□□□ -0.52
TIR4	YOR009W	VHS1	Q03785	461 aa		11.79	□□□□□ -0.52
TIR4	YOR009W	GGA1	Q06336	557 aa		11.79	□□□□□ -0.52
TIR4	YOR009W	STT4	P37297	1900 aa		11.78	□□□□□ -0.52
TIR4	YOR009W	ARG81	P05085	880 aa		11.78	□□□□□ -0.52
TIR4	YOR009W	SPT15	P13393	240 aa	Known RBP	11.78	□□□□□ -0.52
TIR4	YOR009W	POL30	P15873	258 aa	Known RBP	11.78	□□□□□ -0.52
TIR4	YOR009W	SLX5	P32828	619 aa	Known RBP	11.78	□□□□□ -0.52
TIR4	YOR009W	DEF1	P35732	738 aa	Known RBP	11.78	□□□□□ -0.52
TIR4	YOR009W	IST2	P38250	946 aa		11.78	□□□□□ -0.52
TIR4	YOR009W	MDJ2	P42834	146 aa		11.78	□□□□□ -0.52
TIR4	YOR009W	TY4A-J	P47023	414 aa		11.78	□□□□□ -0.52
TIR4	YOR009W	GTO1	P48239	356 aa		11.78	□□□□□ -0.52
TIR4	YOR009W	ECM11	Q04110	302 aa		11.78	□□□□□ -0.52
TIR4	YOR009W	RGT2	Q12300	763 aa		11.78	□□□□□ -0.52
TIR4	YOR009W	AI3	P03877	415 aa		11.77	□□□□□ -0.52
TIR4	YOR009W	HXT4	P32467	576 aa		11.77	□□□□□ -0.52
TIR4	YOR009W	DPH5	P32469	300 aa	Predicted RBP	11.77	□□□□□ -0.52
TIR4	YOR009W	MGM101	P32787	269 aa	Known RBP	11.77	□□□□□ -0.52
TIR4	YOR009W	RPT5	P33297	434 aa	Known RBP	11.77	□□□□□ -0.52
TIR4	YOR009W	HXT6	P39003	570 aa	Known RBP	11.77	□□□□□ -0.52
TIR4	YOR009W	HXT7	P39004	570 aa		11.77	□□□□□ -0.52
TIR4	YOR009W	YJL070C	P40361	888 aa		11.77	□□□□□ -0.52
TIR4	YOR009W	IMA5	P40884	581 aa		11.77	□□□□□ -0.52
TIR4	YOR009W	GIP3	Q03016	1276 aa		11.77	□□□□□ -0.52
TIR4	YOR009W	HOT1	Q03213	719 aa		11.77	□□□□□ -0.52
TIR4	YOR009W	YMR034C	Q05131	434 aa	Predicted RBP	11.77	□□□□□ -0.52
TIR4	YOR009W	BSC2	Q05611	235 aa		11.77	□□□□□ -0.52
TIR4	YOR009W	PLB3	Q08108	686 aa		11.77	□□□□□ -0.52
TIR4	YOR009W	NHA1	Q99271	985 aa		11.77	□□□□□ -0.52
TIR4	YOR009W	BEM2	P39960	2167 aa	Known RBP	11.77	□□□□□ -0.53
TIR4	YOR009W	SGV1	P23293	657 aa	Known RBP	11.76	□□□□□ -0.53
TIR4	YOR009W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	11.76	□□□□□ -0.53	not detected
TIR4	YOR009W	TCD2	P36101	447 aa	Known RBP	11.76	□□□□□ -0.53
TIR4	YOR009W	DSF2	P38213	736 aa		11.76	□□□□□ -0.53
TIR4	YOR009W	YPT35	P38815	214 aa	Known RBP	11.76	□□□□□ -0.53
TIR4	YOR009W	NOP9	P47077	666 aa	Known RBP	11.76	□□□□□ -0.53
TIR4	YOR009W	DIA3	P52290	468 aa		11.76	□□□□□ -0.53
TIR4	YOR009W	COS6	P53344	381 aa		11.76	□□□□□ -0.53
TIR4	YOR009W	MET31	Q03081	177 aa		11.76	□□□□□ -0.53
TIR4	YOR009W	HFD1	Q04458	532 aa		11.76	□□□□□ -0.53
TIR4	YOR009W	ATG29	Q12092	213 aa		11.76	□□□□□ -0.53
TIR4	YOR009W	RPS4A	P0CX35	261 aa	Known RBP	11.76	□□□□□ -0.53
TIR4	YOR009W	RPS4B	P0CX36	261 aa	Known RBP	11.76	□□□□□ -0.53
TIR4	YOR009W	TFC1	P32367	649 aa		11.76	□□□□□ -0.53
TIR4	YOR009W	MRPL17	P36528	281 aa		11.76	□□□□□ -0.53
TIR4	YOR009W	PDX3	P38075	228 aa	Known RBP	11.76	□□□□□ -0.53
TIR4	YOR009W	ROT2	P38138	954 aa		11.76	□□□□□ -0.53
TIR4	YOR009W	WSC4	P38739	605 aa		11.76	□□□□□ -0.53
TIR4	YOR009W	AYR1	P40471	297 aa		11.76	□□□□□ -0.53
TIR4	YOR009W	COS12	P53053	380 aa		11.76	□□□□□ -0.53
TIR4	YOR009W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	11.76	□□□□□ -0.53	not detected
TIR4	YOR009W	YOL159C	Q08300	171 aa		11.76	□□□□□ -0.53
TIR4	YOR009W	ADF1	Q2V2Q1	113 aa		11.76	□□□□□ -0.53
TIR4	YOR009W	ARG3	P05150	338 aa		11.75	□□□□□ -0.53
TIR4	YOR009W	LEU4	P06208	619 aa	Known RBP	11.75	□□□□□ -0.53
TIR4	YOR009W	FUN30	P31380	1131 aa		11.75	□□□□□ -0.53
TIR4	YOR009W	YKR078W	P36158	585 aa	Known RBP	11.75	□□□□□ -0.53
TIR4	YOR009W	GIC1	P38785	314 aa		11.75	□□□□□ -0.53
TIR4	YOR009W	DIM1	P41819	318 aa	Known RBP	11.75	□□□□□ -0.53
TIR4	YOR009W	SGF73	P53165	657 aa		11.75	□□□□□ -0.53
TIR4	YOR009W	CAF120	P53836	1060 aa		11.75	□□□□□ -0.53
TIR4	YOR009W	IDP3	P53982	420 aa	Known RBP	11.75	□□□□□ -0.53
TIR4	YOR009W	CTK1	Q03957	528 aa	Known RBP	11.75	□□□□□ -0.53
TIR4	YOR009W	YHC1	Q05900	231 aa	Known RBP	11.75	□□□□□ -0.53
TIR4	YOR009W	PSR1	Q07800	427 aa		11.75	□□□□□ -0.53
TIR4	YOR009W	MUM3	Q08750	479 aa		11.75	□□□□□ -0.53
TIR4	YOR009W	PFA4	Q12006	378 aa		11.75	□□□□□ -0.53
TIR4	YOR009W	MSS116	P15424	664 aa	Known RBP	11.74	□□□□□ -0.53
TIR4	YOR009W	ATP7	P30902	174 aa		11.74	□□□□□ -0.53
TIR4	YOR009W	YCR087C-A	P37263	153 aa		11.74	□□□□□ -0.53
TIR4	YOR009W	DED81	P38707	554 aa	Known RBP	11.74	□□□□□ -0.53
TIR4	YOR009W	RRP3	P38712	501 aa	Known RBP	11.74	□□□□□ -0.53
TIR4	YOR009W	BAT1	P38891	393 aa	Known RBP	11.74	□□□□□ -0.53
TIR4	YOR009W	NDE1	P40215	560 aa		11.74	□□□□□ -0.53
TIR4	YOR009W	YJR142W	P47173	342 aa		11.74	□□□□□ -0.53
TIR4	YOR009W	NIS1	P53939	407 aa		11.74	□□□□□ -0.53

Retrieved 100 of 5,963 RNA–protein pairs in 169.1 ms