RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W ASK1P35734 292 aa10.23□□□□□ -0.77
PRE6YOL038W RRP14P36080 434 aaKnown RBP10.23□□□□□ -0.77
PRE6YOL038W SPP381P38282 291 aaPredicted RBP10.23□□□□□ -0.77
PRE6YOL038W HXT6P39003 570 aaKnown RBP10.23□□□□□ -0.77
PRE6YOL038W HXT7P39004 570 aa10.23□□□□□ -0.77
PRE6YOL038W JHD2P47156 728 aaPredicted RBP10.23□□□□□ -0.77
PRE6YOL038W IBA57P47158 497 aa10.23□□□□□ -0.77
PRE6YOL038W FRA1Q07825 749 aa10.23□□□□□ -0.77
PRE6YOL038W APC9Q12107 265 aa10.23□□□□□ -0.77
PRE6YOL038W LEU9Q12166 604 aaKnown RBP10.23□□□□□ -0.77
PRE6YOL038W YPL245WQ12179 454 aaKnown RBP10.23□□□□□ -0.77
PRE6YOL038W URA4P20051 364 aa10.22□□□□□ -0.77
PRE6YOL038W CHA1P25379 360 aaKnown RBP10.22□□□□□ -0.77
PRE6YOL038W MXR2P25566 168 aa10.22□□□□□ -0.77
PRE6YOL038W VAC17P25591 423 aa10.22□□□□□ -0.77
PRE6YOL038W YRO2P38079 344 aa10.22□□□□□ -0.77
PRE6YOL038W RRN10P38204 145 aa10.22□□□□□ -0.77
PRE6YOL038W SPC97P38863 823 aa10.22□□□□□ -0.77
PRE6YOL038W AXL2P38928 823 aa10.22□□□□□ -0.77
PRE6YOL038W YMR155WQ03795 547 aa10.22□□□□□ -0.77
PRE6YOL038W GIC2Q06648 383 aa10.22□□□□□ -0.77
PRE6YOL038W TEN1Q07921 160 aa10.22□□□□□ -0.77
PRE6YOL038W YPR011CQ12251 326 aa10.22□□□□□ -0.77
PRE6YOL038W RRP42Q12277 265 aaPredicted RBP10.22□□□□□ -0.77
PRE6YOL038W HSP42Q12329 375 aa10.22□□□□□ -0.77
PRE6YOL038W GLT1Q12680 2145 aaKnown RBP10.22□□□□□ -0.77
PRE6YOL038W LAT1P12695 482 aaKnown RBP10.21□□□□□ -0.77
PRE6YOL038W RPO26P20435 155 aa10.21□□□□□ -0.77
PRE6YOL038W YIL152WP40455 235 aa10.21□□□□□ -0.77
PRE6YOL038W YRB1P41920 201 aaKnown RBP10.21□□□□□ -0.77
PRE6YOL038W URB2P47108 1174 aa10.21□□□□□ -0.77
PRE6YOL038W AIF1P52923 378 aa10.21□□□□□ -0.77
PRE6YOL038W RMI1Q02685 241 aa10.21□□□□□ -0.77
PRE6YOL038W HPT1Q04178 221 aaKnown RBP10.21□□□□□ -0.77
PRE6YOL038W VID22Q05934 901 aa10.21□□□□□ -0.77
PRE6YOL038W SRN2Q99176 213 aa10.21□□□□□ -0.77
PRE6YOL038W COX6P00427 148 aa10.2□□□□□ -0.78
PRE6YOL038W RPB4P20433 221 aaPredicted RBP10.2□□□□□ -0.78
PRE6YOL038W ADE1P27616 306 aa10.2□□□□□ -0.78
PRE6YOL038W YME1P32795 747 aa10.2□□□□□ -0.78
PRE6YOL038W NFU1P32860 256 aa10.2□□□□□ -0.78
PRE6YOL038W PHO89P38361 574 aa10.2□□□□□ -0.78
PRE6YOL038W YJL206CP39529 758 aa10.2□□□□□ -0.78
PRE6YOL038W YJR039WP47107 1121 aa10.2□□□□□ -0.78
PRE6YOL038W ASK10P48361 1146 aa10.2□□□□□ -0.78
PRE6YOL038W SHY1P53266 389 aa10.2□□□□□ -0.78
PRE6YOL038W NHP10Q03435 203 aa10.2□□□□□ -0.78
PRE6YOL038W RSF1Q05043 376 aa10.2□□□□□ -0.78
PRE6YOL038W MMT2Q08970 484 aa10.2□□□□□ -0.78
PRE6YOL038W ARG4P04076 463 aaPredicted RBP10.19□□□□□ -0.78
PRE6YOL038W SPT3P06844 337 aa10.19□□□□□ -0.78
PRE6YOL038W RSR1P13856 272 aa10.19□□□□□ -0.78
PRE6YOL038W PHA2P32452 334 aa10.19□□□□□ -0.78
PRE6YOL038W RMA1P36001 430 aaKnown RBP10.19□□□□□ -0.78
PRE6YOL038W PTI1P39927 425 aaPredicted RBP10.19□□□□□ -0.78
PRE6YOL038W MNT3P40549 630 aa10.19□□□□□ -0.78
PRE6YOL038W YGL260WP53056 76 aa10.19□□□□□ -0.78
PRE6YOL038W IBD2P53892 351 aa10.19□□□□□ -0.78
PRE6YOL038W SUR7P54003 302 aa10.19□□□□□ -0.78
PRE6YOL038W USA1Q03714 838 aa10.19□□□□□ -0.78
PRE6YOL038W TAF11Q04226 346 aa10.19□□□□□ -0.78
PRE6YOL038W DFG5Q05031 458 aa10.19□□□□□ -0.78
PRE6YOL038W YDR338CQ05497 695 aa10.19□□□□□ -0.78
PRE6YOL038W MCA1Q08601 432 aa10.19□□□□□ -0.78
PRE6YOL038W LEU4P06208 619 aaKnown RBP10.18□□□□□ -0.78
PRE6YOL038W PRP6P19735 899 aaPredicted RBP10.18□□□□□ -0.78
PRE6YOL038W MRPL25P23369 157 aa10.18□□□□□ -0.78
PRE6YOL038W CRM1P30822 1084 aaKnown RBP10.18□□□□□ -0.78
PRE6YOL038W MLS1P30952 554 aa10.18□□□□□ -0.78
PRE6YOL038W CBP4P37267 147 aa10.18□□□□□ -0.78
PRE6YOL038W COA1P40452 197 aa10.18□□□□□ -0.78
PRE6YOL038W PRM2P40534 656 aa10.18□□□□□ -0.78
PRE6YOL038W VMA13P41807 478 aaKnown RBP10.18□□□□□ -0.78
PRE6YOL038W LSC1P53598 329 aaKnown RBP10.18□□□□□ -0.78
PRE6YOL038W PNS1Q12412 539 aa10.18□□□□□ -0.78
PRE6YOL038W TRX3P25372 127 aa10.17□□□□□ -0.78
PRE6YOL038W YCR090CP25654 182 aaKnown RBP10.17□□□□□ -0.78
PRE6YOL038W YKL100CP34248 587 aa10.17□□□□□ -0.78
PRE6YOL038W APQ12P40532 138 aa10.17□□□□□ -0.78
PRE6YOL038W GUS1P46655 708 aaKnown RBP RIP-Chip data10.17□□□□□ -0.78not detected
PRE6YOL038W YGL176CP46945 554 aa10.17□□□□□ -0.78
PRE6YOL038W PRO2P54885 456 aaKnown RBP10.17□□□□□ -0.78
PRE6YOL038W GIP3Q03016 1276 aa10.17□□□□□ -0.78
PRE6YOL038W YLR053CQ12026 108 aa10.17□□□□□ -0.78
PRE6YOL038W IOC2Q12072 812 aa10.17□□□□□ -0.78
PRE6YOL038W MHT1Q12525 324 aa10.17□□□□□ -0.78
PRE6YOL038W NIP1P32497 812 aaKnown RBP10.16□□□□□ -0.78
PRE6YOL038W UGP1P32861 499 aaKnown RBP10.16□□□□□ -0.78
PRE6YOL038W RPS27AP35997 82 aaKnown RBP10.16□□□□□ -0.78
PRE6YOL038W RPS27BP38711 82 aa10.16□□□□□ -0.78
PRE6YOL038W AXL1P40851 1208 aa10.16□□□□□ -0.78
PRE6YOL038W YNR021WP53723 404 aaKnown RBP10.16□□□□□ -0.78
PRE6YOL038W YNL260CP53846 198 aa10.16□□□□□ -0.78
PRE6YOL038W SDH1Q00711 640 aa10.16□□□□□ -0.78
PRE6YOL038W TDA5Q06417 326 aaKnown RBP10.16□□□□□ -0.78
PRE6YOL038W BAS1P22035 811 aa10.15□□□□□ -0.78
PRE6YOL038W SRB5P32585 307 aa10.15□□□□□ -0.78
PRE6YOL038W CBF5P33322 483 aaKnown RBP RIP-Chip data10.15□□□□□ -0.78not detected
PRE6YOL038W YER034WP40022 185 aaKnown RBP10.15□□□□□ -0.78
PRE6YOL038W CAB2P40506 365 aa10.15□□□□□ -0.78
Retrieved 100 of 5,963 RNA–protein pairs in 96.5 ms