RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeastyeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS27YNR006W VHS2P40463 436 aa3.85□□□□□ -1.79
VPS27YNR006W OPT1P40897 799 aa3.85□□□□□ -1.79
VPS27YNR006W AIM22P47051 409 aa3.85□□□□□ -1.79
VPS27YNR006W URB2P47108 1174 aa3.85□□□□□ -1.79
VPS27YNR006W KTR5P53966 522 aaPredicted RBP3.85□□□□□ -1.79
VPS27YNR006W YMR130WQ04223 302 aa3.85□□□□□ -1.79
VPS27YNR006W YML053CQ04978 212 aa3.85□□□□□ -1.79
VPS27YNR006W CUR1Q06469 252 aa3.85□□□□□ -1.79
VPS27YNR006W USV1Q12132 391 aa3.85□□□□□ -1.79
VPS27YNR006W AAC1P04710 309 aa3.84□□□□□ -1.79
VPS27YNR006W ARG81P05085 880 aa3.84□□□□□ -1.79
VPS27YNR006W YJU2P28320 278 aaPredicted RBP3.84□□□□□ -1.79
VPS27YNR006W GDA1P32621 518 aa3.84□□□□□ -1.79
VPS27YNR006W SOF1P33750 489 aaKnown RBP3.84□□□□□ -1.79
VPS27YNR006W YUH1P35127 236 aa3.84□□□□□ -1.79
VPS27YNR006W PPS1P38148 807 aa3.84□□□□□ -1.79
VPS27YNR006W SPT8P38915 602 aa3.84□□□□□ -1.79
VPS27YNR006W UBX6P47049 396 aa3.84□□□□□ -1.79
VPS27YNR006W YGR151CP53287 111 aa3.84□□□□□ -1.79
VPS27YNR006W IST1P53843 298 aaPredicted RBP3.84□□□□□ -1.79
VPS27YNR006W KIN4Q01919 800 aa3.84□□□□□ -1.79
VPS27YNR006W EGD1Q02642 157 aaKnown RBP3.84□□□□□ -1.79
VPS27YNR006W YOL073CQ08232 322 aa3.84□□□□□ -1.79
VPS27YNR006W VPS63O13549 108 aa3.84□□□□□ -1.8
VPS27YNR006W SCH9P11792 824 aaKnown RBP3.84□□□□□ -1.8
VPS27YNR006W HOM2P13663 365 aaKnown RBP3.84□□□□□ -1.8
VPS27YNR006W NDI1P32340 513 aa3.84□□□□□ -1.8
VPS27YNR006W MSG5P38590 489 aa3.84□□□□□ -1.8
VPS27YNR006W YHL017WP38745 532 aa3.84□□□□□ -1.8
VPS27YNR006W CTM1P38818 585 aa3.84□□□□□ -1.8
VPS27YNR006W LIN1P38852 340 aaPredicted RBP3.84□□□□□ -1.8
VPS27YNR006W KEL1P38853 1164 aaKnown RBP3.84□□□□□ -1.8
VPS27YNR006W RPA34P47006 233 aaPredicted RBP3.84□□□□□ -1.8
VPS27YNR006W RMD9P53140 646 aaKnown RBP3.84□□□□□ -1.8
VPS27YNR006W NMA2P53204 395 aa3.84□□□□□ -1.8
VPS27YNR006W UFO1Q04511 668 aa3.84□□□□□ -1.8
VPS27YNR006W DCS1Q06151 350 aa3.84□□□□□ -1.8
VPS27YNR006W VAM3Q12241 283 aa3.84□□□□□ -1.8
VPS27YNR006W CAR1P00812 333 aaKnown RBP3.83□□□□□ -1.8
VPS27YNR006W ILV5P06168 395 aaKnown RBP3.83□□□□□ -1.8
VPS27YNR006W HNM1P19807 563 aa3.83□□□□□ -1.8
VPS27YNR006W RDS1P25611 832 aa3.83□□□□□ -1.8
VPS27YNR006W HIR2P32480 875 aa3.83□□□□□ -1.8
VPS27YNR006W TRM2P33753 639 aa3.83□□□□□ -1.8
VPS27YNR006W ADE17P38009 592 aaKnown RBP3.83□□□□□ -1.8
VPS27YNR006W ASC1P38011 319 aaKnown RBP3.83□□□□□ -1.8
VPS27YNR006W YBR139WP38109 508 aa3.83□□□□□ -1.8
VPS27YNR006W VBA2P38358 474 aaKnown RBP3.83□□□□□ -1.8
VPS27YNR006W MNN9P39107 395 aaKnown RBP3.83□□□□□ -1.8
VPS27YNR006W SSO2P39926 295 aa3.83□□□□□ -1.8
VPS27YNR006W SAP1P39955 897 aaKnown RBP3.83□□□□□ -1.8
VPS27YNR006W YGR127WP53275 312 aa3.83□□□□□ -1.8
VPS27YNR006W COP1P53622 1201 aaKnown RBP3.83□□□□□ -1.8
VPS27YNR006W OCA2P53949 197 aa3.83□□□□□ -1.8
VPS27YNR006W SLG1P54867 378 aa3.83□□□□□ -1.8
VPS27YNR006W CWC21Q03375 135 aaKnown RBP3.83□□□□□ -1.8
VPS27YNR006W NDL1Q06568 189 aa3.83□□□□□ -1.8
VPS27YNR006W TEN1Q07921 160 aa3.83□□□□□ -1.8
VPS27YNR006W GCD2P12754 651 aaPredicted RBP3.82□□□□□ -1.8
VPS27YNR006W LHS1P36016 881 aa3.82□□□□□ -1.8
VPS27YNR006W TSC10P38342 320 aa3.82□□□□□ -1.8
VPS27YNR006W GIP4P39732 760 aa3.82□□□□□ -1.8
VPS27YNR006W IRC24P40580 263 aa3.82□□□□□ -1.8
VPS27YNR006W LOC1P43586 204 aaPredicted RBP3.82□□□□□ -1.8
VPS27YNR006W RRP46P53256 223 aaPredicted RBP3.82□□□□□ -1.8
VPS27YNR006W LSB1P53281 241 aa3.82□□□□□ -1.8
VPS27YNR006W COQ6P53318 479 aa3.82□□□□□ -1.8
VPS27YNR006W SMA2Q04658 369 aa3.82□□□□□ -1.8
VPS27YNR006W STE23Q06010 1027 aa3.82□□□□□ -1.8
VPS27YNR006W YLR413WQ06689 675 aa3.82□□□□□ -1.8
VPS27YNR006W SLK19Q08581 821 aaKnown RBP3.82□□□□□ -1.8
VPS27YNR006W MTR10Q99189 972 aa3.82□□□□□ -1.8
VPS27YNR006W RAD61Q99359 647 aa3.82□□□□□ -1.8
VPS27YNR006W COX3P00420 269 aa3.81□□□□□ -1.8
VPS27YNR006W SAG1P20840 650 aa3.81□□□□□ -1.8
VPS27YNR006W BOS1P25385 244 aa3.81□□□□□ -1.8
VPS27YNR006W ARA1P38115 344 aa3.81□□□□□ -1.8
VPS27YNR006W PCA1P38360 1216 aa3.81□□□□□ -1.8
VPS27YNR006W YMR147WP40218 223 aaKnown RBP3.81□□□□□ -1.8
VPS27YNR006W YFR018CP43599 363 aa3.81□□□□□ -1.8
VPS27YNR006W ATG27P46989 271 aa3.81□□□□□ -1.8
VPS27YNR006W YIP5P53108 310 aa3.81□□□□□ -1.8
VPS27YNR006W YGL108CP53139 140 aa3.81□□□□□ -1.8
VPS27YNR006W MPS2P53159 387 aa3.81□□□□□ -1.8
VPS27YNR006W SUN4P53616 420 aa3.81□□□□□ -1.8
VPS27YNR006W TRS23Q03784 219 aa3.81□□□□□ -1.8
VPS27YNR006W MCP2Q06567 569 aa3.81□□□□□ -1.8
VPS27YNR006W CYK3Q07533 885 aa3.81□□□□□ -1.8
VPS27YNR006W DIS3Q08162 1001 aaKnown RBP3.81□□□□□ -1.8
VPS27YNR006W CRT10Q08226 957 aa3.81□□□□□ -1.8
VPS27YNR006W RPS10AQ08745 105 aaPredicted RBP3.81□□□□□ -1.8
VPS27YNR006W PCL8Q08966 492 aa3.81□□□□□ -1.8
VPS27YNR006W TGS1Q12052 315 aa3.81□□□□□ -1.8
VPS27YNR006W ULA1Q12059 462 aa3.81□□□□□ -1.8
VPS27YNR006W MRH1Q12117 320 aaPredicted RBP3.81□□□□□ -1.8
VPS27YNR006W MED2Q12124 431 aa3.81□□□□□ -1.8
VPS27YNR006W RRD2Q12461 358 aa3.81□□□□□ -1.8
VPS27YNR006W MRPL23Q12487 163 aaPredicted RBP3.81□□□□□ -1.8
VPS27YNR006W SUP35P05453 685 aaKnown RBP3.81□□□□□ -1.8
VPS27YNR006W SPS4P09937 338 aa3.81□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 46.6 ms