RNA–Protein interactions for RNA: YMR185W

RTP1, Transcript of Protein required for the nuclear import and biogenesis of RNA pol II, yeastyeast

Gene RTP1, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTP1YMR185W MRL1Q06815 381 aa1.79□□□□□ -2.12
RTP1YMR185W NOP12Q08208 459 aaKnown RBP1.79□□□□□ -2.12
RTP1YMR185W THI20Q08224 551 aa1.79□□□□□ -2.12
RTP1YMR185W SLD7Q08457 257 aa1.79□□□□□ -2.12
RTP1YMR185W TY3A-GQ12173 290 aa1.79□□□□□ -2.12
RTP1YMR185W SVS1Q12254 260 aa1.79□□□□□ -2.12
RTP1YMR185W ERP3Q12403 225 aa1.79□□□□□ -2.12
RTP1YMR185W YPL119C-AQ3E751 87 aa1.79□□□□□ -2.12
RTP1YMR185W BRR1Q99177 341 aaPredicted RBP1.79□□□□□ -2.12
RTP1YMR185W TY3A-IQ99219 290 aa1.79□□□□□ -2.12
RTP1YMR185W HSF1P10961 833 aa1.78□□□□□ -2.12
RTP1YMR185W NMT1P14743 455 aa1.78□□□□□ -2.12
RTP1YMR185W POL30P15873 258 aaKnown RBP1.78□□□□□ -2.12
RTP1YMR185W SAT4P25333 603 aaKnown RBP1.78□□□□□ -2.12
RTP1YMR185W VBA3P25594 458 aa1.78□□□□□ -2.12
RTP1YMR185W PTC6P25646 442 aa1.78□□□□□ -2.12
RTP1YMR185W ACH1P32316 526 aa1.78□□□□□ -2.12
RTP1YMR185W TIM23P32897 222 aa1.78□□□□□ -2.12
RTP1YMR185W PET112P33893 541 aa1.78□□□□□ -2.12
RTP1YMR185W VBA5P36172 582 aa1.78□□□□□ -2.12
RTP1YMR185W RIB1P38066 345 aa1.78□□□□□ -2.12
RTP1YMR185W MCM7P38132 845 aa1.78□□□□□ -2.12
RTP1YMR185W STB5P38699 743 aa1.78□□□□□ -2.12
RTP1YMR185W SFB3P38810 929 aa1.78□□□□□ -2.12
RTP1YMR185W IPT1P38954 527 aa1.78□□□□□ -2.12
RTP1YMR185W FAA3P39002 694 aa1.78□□□□□ -2.12
RTP1YMR185W RBG1P39729 369 aa1.78□□□□□ -2.12
RTP1YMR185W MTW1P39731 289 aa1.78□□□□□ -2.12
RTP1YMR185W EAF5P39995 279 aa1.78□□□□□ -2.12
RTP1YMR185W TPA1P40032 644 aaKnown RBP1.78□□□□□ -2.12
RTP1YMR185W JLP2P40206 208 aa1.78□□□□□ -2.12
RTP1YMR185W PSF2P40359 213 aa1.78□□□□□ -2.12
RTP1YMR185W RRT5P43607 289 aa1.78□□□□□ -2.12
RTP1YMR185W GUS1P46655 708 aaKnown RBP RIP-Chip data1.78□□□□□ -2.12not detected
RTP1YMR185W BIT61P47041 543 aa1.78□□□□□ -2.12
RTP1YMR185W SLD3P53135 668 aa1.78□□□□□ -2.12
RTP1YMR185W SPC105P53148 917 aa1.78□□□□□ -2.12
RTP1YMR185W YGL039WP53183 348 aaKnown RBP1.78□□□□□ -2.12
RTP1YMR185W TWF1P53250 332 aa1.78□□□□□ -2.12
RTP1YMR185W RBG2P53295 368 aaKnown RBP1.78□□□□□ -2.12
RTP1YMR185W YGR283CP53336 341 aaPredicted RBP1.78□□□□□ -2.12
RTP1YMR185W NOP13P53883 403 aaKnown RBP RIP-Chip data1.78□□□□□ -2.12not detected
RTP1YMR185W SFB2P53953 876 aa1.78□□□□□ -2.12
RTP1YMR185W PRP38Q00723 242 aaPredicted RBP1.78□□□□□ -2.12
RTP1YMR185W NPL3Q01560 414 aaKnown RBP RIP-Chip data1.78□□□□□ -2.12not detected
RTP1YMR185W KIN4Q01919 800 aa1.78□□□□□ -2.12
RTP1YMR185W UGO1Q03327 502 aa1.78□□□□□ -2.12
RTP1YMR185W RSN1Q03516 953 aa1.78□□□□□ -2.12
RTP1YMR185W YML020WQ03722 664 aa1.78□□□□□ -2.12
RTP1YMR185W MGR3Q04472 501 aa1.78□□□□□ -2.12
RTP1YMR185W ARP10Q04549 284 aa1.78□□□□□ -2.12
RTP1YMR185W AIM32Q04689 311 aa1.78□□□□□ -2.12
RTP1YMR185W MCP2Q06567 569 aa1.78□□□□□ -2.12
RTP1YMR185W LOT6Q07923 191 aa1.78□□□□□ -2.12
RTP1YMR185W RCL1Q08096 367 aaPredicted RBP1.78□□□□□ -2.12
RTP1YMR185W NGL1Q08213 363 aaKnown RBP1.78□□□□□ -2.12
RTP1YMR185W ESA1Q08649 445 aa1.78□□□□□ -2.12
RTP1YMR185W CFT2Q12102 859 aaPredicted RBP1.78□□□□□ -2.12
RTP1YMR185W APC9Q12107 265 aa1.78□□□□□ -2.12
RTP1YMR185W DCP1Q12517 231 aaPredicted RBP1.78□□□□□ -2.12
RTP1YMR185W CSR2Q12734 1121 aa1.78□□□□□ -2.12
RTP1YMR185W RPL6BP05739 176 aaKnown RBP1.78□□□□□ -2.12
RTP1YMR185W CDC31P06704 161 aaKnown RBP1.78□□□□□ -2.12
RTP1YMR185W GPH1P06738 902 aaKnown RBP1.78□□□□□ -2.12
RTP1YMR185W SAM1P10659 382 aaKnown RBP1.78□□□□□ -2.12
RTP1YMR185W ENA1P13587 1091 aa1.78□□□□□ -2.12
RTP1YMR185W SEC15P22224 910 aa1.78□□□□□ -2.12
RTP1YMR185W TKL1P23254 680 aaKnown RBP1.78□□□□□ -2.12
RTP1YMR185W CAD1P24813 409 aaKnown RBP1.78□□□□□ -2.12
RTP1YMR185W SGF29P25554 259 aa1.78□□□□□ -2.12
RTP1YMR185W CPR3P25719 182 aa1.78□□□□□ -2.12
RTP1YMR185W CAF4P36130 643 aa1.78□□□□□ -2.12
RTP1YMR185W ECM13P38195 257 aa1.78□□□□□ -2.12
RTP1YMR185W SLX1P38324 304 aa1.78□□□□□ -2.12
RTP1YMR185W YBR242WP38331 238 aa1.78□□□□□ -2.12
RTP1YMR185W CBR1P38626 284 aaKnown RBP1.78□□□□□ -2.12
RTP1YMR185W PPE1P38796 400 aa1.78□□□□□ -2.12
RTP1YMR185W EGD2P38879 174 aaKnown RBP1.78□□□□□ -2.12
RTP1YMR185W HAT2P39984 401 aa1.78□□□□□ -2.12
RTP1YMR185W YER137CP40083 148 aaKnown RBP1.78□□□□□ -2.12
RTP1YMR185W YJL070CP40361 888 aa1.78□□□□□ -2.12
RTP1YMR185W UTP18P40362 594 aaPredicted RBP1.78□□□□□ -2.12
RTP1YMR185W ELP2P42935 788 aa1.78□□□□□ -2.12
RTP1YMR185W BST1P43571 1029 aa1.78□□□□□ -2.12
RTP1YMR185W YFL012WP43580 148 aa1.78□□□□□ -2.12
RTP1YMR185W PET130P47065 347 aa1.78□□□□□ -2.12
RTP1YMR185W HOC1P47124 396 aa1.78□□□□□ -2.12
RTP1YMR185W PEX8P53248 589 aa1.78□□□□□ -2.12
RTP1YMR185W GTR2P53290 341 aa1.78□□□□□ -2.12
RTP1YMR185W SLG1P54867 378 aa1.78□□□□□ -2.12
RTP1YMR185W SPR6Q01684 191 aa1.78□□□□□ -2.12
RTP1YMR185W ENA2Q01896 1091 aa1.78□□□□□ -2.12
RTP1YMR185W RSC9Q03124 581 aa1.78□□□□□ -2.12
RTP1YMR185W ABZ2Q03266 374 aa1.78□□□□□ -2.12
RTP1YMR185W CEF1Q03654 590 aaPredicted RBP1.78□□□□□ -2.12
RTP1YMR185W YMR160WQ03823 816 aa1.78□□□□□ -2.12
RTP1YMR185W YDR132CQ03900 495 aa1.78□□□□□ -2.12
RTP1YMR185W NHX1Q04121 633 aa1.78□□□□□ -2.12
RTP1YMR185W YDR109CQ04585 715 aa1.78□□□□□ -2.12
RTP1YMR185W ARP9Q05123 467 aa1.78□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 30.3 ms