RNA–Protein interactions for RNA: YMR005W

TAF4, Transcript of TFIID subunit (48 kDa), yeastyeast

Gene TAF4, Length 1,167 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TAF4YMR005W NPR2P39923 615 aa5.15□□□□□ -1.59
TAF4YMR005W RPT6Q01939 405 aaKnown RBP5.15□□□□□ -1.59
TAF4YMR005W RPM2Q02773 1202 aa5.15□□□□□ -1.59
TAF4YMR005W PRD1P25375 712 aa5.14□□□□□ -1.59
TAF4YMR005W PRO3P32263 286 aaKnown RBP5.14□□□□□ -1.59
TAF4YMR005W SIP2P34164 415 aaKnown RBP5.14□□□□□ -1.59
TAF4YMR005W NAB3P38996 802 aaKnown RBP RIP-Chip data5.14□□□□□ -1.59not detected
TAF4YMR005W AIM22P47051 409 aa5.14□□□□□ -1.59
TAF4YMR005W TIM10P87108 93 aa5.14□□□□□ -1.59
TAF4YMR005W HCR1Q05775 265 aaKnown RBP5.14□□□□□ -1.59
TAF4YMR005W FOB1O13329 566 aa5.13□□□□□ -1.59
TAF4YMR005W CAR1P00812 333 aaKnown RBP5.13□□□□□ -1.59
TAF4YMR005W PHO2P07269 559 aa5.13□□□□□ -1.59
TAF4YMR005W ELO2P25358 347 aa5.13□□□□□ -1.59
TAF4YMR005W CCT4P39078 528 aaKnown RBP5.13□□□□□ -1.59
TAF4YMR005W VPS52P39904 641 aa5.13□□□□□ -1.59
TAF4YMR005W DOT5P40553 215 aa5.13□□□□□ -1.59
TAF4YMR005W MET28P40573 187 aa5.13□□□□□ -1.59
TAF4YMR005W SCD6P45978 349 aaKnown RBP RIP-Chip data5.13□□□□□ -1.59not detected
TAF4YMR005W YMR230W-AQ3E7B5 62 aa5.13□□□□□ -1.59
TAF4YMR005W SUC2P00724 532 aa5.12□□□□□ -1.59
TAF4YMR005W MRP7P12687 371 aa5.12□□□□□ -1.59
TAF4YMR005W MTF1P14908 341 aaKnown RBP5.12□□□□□ -1.59
TAF4YMR005W YCR007CP25354 239 aa5.12□□□□□ -1.59
TAF4YMR005W NDC1P32500 655 aa5.12□□□□□ -1.59
TAF4YMR005W PTR2P32901 601 aa5.12□□□□□ -1.59
TAF4YMR005W BNA4P38169 460 aa5.12□□□□□ -1.59
TAF4YMR005W MUM2P38236 366 aa5.12□□□□□ -1.59
TAF4YMR005W DHH1P39517 506 aaKnown RBP5.12□□□□□ -1.59
TAF4YMR005W TIF4631P39935 952 aaKnown RBP5.12□□□□□ -1.59
TAF4YMR005W PET130P47065 347 aa5.12□□□□□ -1.59
TAF4YMR005W SLD5Q03406 294 aa5.12□□□□□ -1.59
TAF4YMR005W IVY1Q04934 453 aa5.12□□□□□ -1.59
TAF4YMR005W AMD1P15274 810 aaKnown RBP5.11□□□□□ -1.59
TAF4YMR005W PRP2P20095 876 aaPredicted RBP5.11□□□□□ -1.59
TAF4YMR005W MRE11P32829 692 aa5.11□□□□□ -1.59
TAF4YMR005W DUG2P38149 878 aa5.11□□□□□ -1.59
TAF4YMR005W TCM62P38228 572 aaKnown RBP5.11□□□□□ -1.59
TAF4YMR005W MDM31P38880 579 aa5.11□□□□□ -1.59
TAF4YMR005W YEL057CP39983 233 aa5.11□□□□□ -1.59
TAF4YMR005W SPO22P40511 975 aa5.11□□□□□ -1.59
TAF4YMR005W HEF3P53978 1044 aaKnown RBP5.11□□□□□ -1.59
TAF4YMR005W BNA5Q05979 453 aa5.11□□□□□ -1.59
TAF4YMR005W YTH1Q06102 208 aaPredicted RBP5.11□□□□□ -1.59
TAF4YMR005W SYO1Q07395 620 aa5.11□□□□□ -1.59
TAF4YMR005W YDL009CQ12210 107 aa5.11□□□□□ -1.59
TAF4YMR005W RPL15AP05748 204 aaKnown RBP5.1□□□□□ -1.59
TAF4YMR005W UTR4P32626 227 aa5.1□□□□□ -1.59
TAF4YMR005W FRE1P32791 686 aa5.1□□□□□ -1.59
TAF4YMR005W ARF3P40994 183 aaRIP-Chip data5.1□□□□□ -1.59not detected
TAF4YMR005W RTT101P47050 842 aa5.1□□□□□ -1.59
TAF4YMR005W YDR239CQ03780 787 aa5.1□□□□□ -1.59
TAF4YMR005W RTT103Q05543 409 aa5.1□□□□□ -1.59
TAF4YMR005W PPT2Q12036 173 aa5.1□□□□□ -1.59
TAF4YMR005W BRR1Q99177 341 aaPredicted RBP5.1□□□□□ -1.59
TAF4YMR005W ARG3P05150 338 aa5.09□□□□□ -1.59
TAF4YMR005W COR1P07256 457 aa5.09□□□□□ -1.59
TAF4YMR005W MSN2P33748 704 aa5.09□□□□□ -1.59
TAF4YMR005W CST26P38226 397 aa5.09□□□□□ -1.59
TAF4YMR005W RLI1Q03195 608 aaKnown RBP5.09□□□□□ -1.59
TAF4YMR005W ERP1Q05359 219 aaKnown RBP5.09□□□□□ -1.59
TAF4YMR005W MRPL51Q06090 140 aaPredicted RBP5.09□□□□□ -1.59
TAF4YMR005W PHO92Q06390 306 aa5.09□□□□□ -1.59
TAF4YMR005W LSP1Q12230 341 aaKnown RBP5.09□□□□□ -1.59
TAF4YMR005W SEC39Q12745 709 aa5.09□□□□□ -1.59
TAF4YMR005W YBR298C-AQ8TGK4 73 aa5.09□□□□□ -1.59
TAF4YMR005W RAV1P47104 1357 aa5.08□□□□□ -1.6
TAF4YMR005W MBB1P39534 108 aa5.08□□□□□ -1.6
TAF4YMR005W CAF130P53280 1122 aaPredicted RBP5.08□□□□□ -1.6
TAF4YMR005W ZPR1P53303 486 aaKnown RBP5.08□□□□□ -1.6
TAF4YMR005W GPI1P53306 609 aa5.08□□□□□ -1.6
TAF4YMR005W SET6Q12529 373 aa5.08□□□□□ -1.6
TAF4YMR005W YDL007C-AQ2V2Q0 85 aa5.08□□□□□ -1.6
TAF4YMR005W EXO70P19658 623 aa5.07□□□□□ -1.6
TAF4YMR005W SPC110P32380 944 aa5.07□□□□□ -1.6
TAF4YMR005W RPN12P32496 274 aa5.07□□□□□ -1.6
TAF4YMR005W UTP9P38882 575 aaKnown RBP5.07□□□□□ -1.6
TAF4YMR005W RPH1P39956 796 aa5.07□□□□□ -1.6
TAF4YMR005W ROK1P45818 564 aaPredicted RBP5.07□□□□□ -1.6
TAF4YMR005W TWF1P53250 332 aa5.07□□□□□ -1.6
TAF4YMR005W PDS5Q04264 1277 aa5.07□□□□□ -1.6
TAF4YMR005W COG4Q06096 861 aa5.07□□□□□ -1.6
TAF4YMR005W TSR2Q06672 205 aaKnown RBP5.07□□□□□ -1.6
TAF4YMR005W BUD14P27637 709 aa5.06□□□□□ -1.6
TAF4YMR005W LOS1P33418 1100 aaPredicted RBP5.06□□□□□ -1.6
TAF4YMR005W VID24P38263 362 aa5.06□□□□□ -1.6
TAF4YMR005W ERP2P39704 215 aa5.06□□□□□ -1.6
TAF4YMR005W NDE1P40215 560 aa5.06□□□□□ -1.6
TAF4YMR005W ESL1P40456 1118 aa5.06□□□□□ -1.6
TAF4YMR005W RPR2P40571 144 aa5.06□□□□□ -1.6
TAF4YMR005W YFR016CP43597 1233 aaKnown RBP5.06□□□□□ -1.6
TAF4YMR005W IRC6P43615 237 aa5.06□□□□□ -1.6
TAF4YMR005W IRC15Q02733 499 aa5.06□□□□□ -1.6
TAF4YMR005W VPS72Q03388 795 aa5.06□□□□□ -1.6
TAF4YMR005W RBS1Q05672 457 aaKnown RBP5.06□□□□□ -1.6
TAF4YMR005W MRD1Q06106 887 aaKnown RBP5.06□□□□□ -1.6
TAF4YMR005W VPS74Q06385 345 aa5.06□□□□□ -1.6
TAF4YMR005W ATG29Q12092 213 aa5.06□□□□□ -1.6
TAF4YMR005W CFT2Q12102 859 aaPredicted RBP5.06□□□□□ -1.6
TAF4YMR005W RPL31BP0C2H9 113 aaKnown RBP5.05□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 46 ms