RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C VHS1Q03785 461 aa8.95□□□□□ -0.98
SEC61YLR378C GMC2Q06201 188 aa8.95□□□□□ -0.98
SEC61YLR378C ASA1Q06822 443 aa8.95□□□□□ -0.98
SEC61YLR378C YCL012CQ8J0M4 134 aa8.95□□□□□ -0.98
SEC61YLR378C PRT1P06103 763 aaKnown RBP8.94□□□□□ -0.98
SEC61YLR378C MSS18P08593 268 aa8.94□□□□□ -0.98
SEC61YLR378C TOP3P13099 656 aa8.94□□□□□ -0.98
SEC61YLR378C SPT15P13393 240 aaKnown RBP8.94□□□□□ -0.98
SEC61YLR378C CHL1P22516 861 aaPredicted RBP8.94□□□□□ -0.98
SEC61YLR378C GBP2P25555 427 aaKnown RBP RIP-Chip data8.94□□□□□ -0.98not detected
SEC61YLR378C STE14P32584 239 aa8.94□□□□□ -0.98
SEC61YLR378C SWH1P35845 1188 aa8.94□□□□□ -0.98
SEC61YLR378C RMA1P36001 430 aaKnown RBP8.94□□□□□ -0.98
SEC61YLR378C YKL151CP36059 337 aa8.94□□□□□ -0.98
SEC61YLR378C YKR078WP36158 585 aaKnown RBP8.94□□□□□ -0.98
SEC61YLR378C TAE1P38340 232 aa8.94□□□□□ -0.98
SEC61YLR378C PPX1P38698 397 aa8.94□□□□□ -0.98
SEC61YLR378C GIM4P40005 111 aaKnown RBP8.94□□□□□ -0.98
SEC61YLR378C MEP2P41948 499 aa8.94□□□□□ -0.98
SEC61YLR378C STB2P46679 850 aa8.94□□□□□ -0.98
SEC61YLR378C YGL176CP46945 554 aa8.94□□□□□ -0.98
SEC61YLR378C YJR030CP47101 745 aa8.94□□□□□ -0.98
SEC61YLR378C GPI1P53306 609 aa8.94□□□□□ -0.98
SEC61YLR378C TDA7P53882 636 aaPredicted RBP8.94□□□□□ -0.98
SEC61YLR378C AQR1P53943 586 aa8.94□□□□□ -0.98
SEC61YLR378C IDP3P53982 420 aaKnown RBP8.94□□□□□ -0.98
SEC61YLR378C YVH1Q02256 364 aaKnown RBP8.94□□□□□ -0.98
SEC61YLR378C YPR011CQ12251 326 aa8.94□□□□□ -0.98
SEC61YLR378C TAF3Q12297 353 aa8.94□□□□□ -0.98
SEC61YLR378C YDR034W-BQ6Q5X2 51 aa8.94□□□□□ -0.98
SEC61YLR378C CCH1P50077 2039 aa8.93□□□□□ -0.98
SEC61YLR378C THP2O13539 261 aaKnown RBP8.93□□□□□ -0.98
SEC61YLR378C YAK1P14680 807 aa8.93□□□□□ -0.98
SEC61YLR378C AAR2P32357 355 aaPredicted RBP8.93□□□□□ -0.98
SEC61YLR378C YHR127WP38833 243 aaKnown RBP8.93□□□□□ -0.98
SEC61YLR378C PFA3P42836 336 aa8.93□□□□□ -0.98
SEC61YLR378C MET12P46151 657 aa8.93□□□□□ -0.98
SEC61YLR378C BIR1P47134 954 aa8.93□□□□□ -0.98
SEC61YLR378C RPM2Q02773 1202 aa8.93□□□□□ -0.98
SEC61YLR378C SVL3Q03088 825 aaKnown RBP8.93□□□□□ -0.98
SEC61YLR378C EFR3Q03653 782 aaKnown RBP8.93□□□□□ -0.98
SEC61YLR378C YMR034CQ05131 434 aaPredicted RBP8.93□□□□□ -0.98
SEC61YLR378C OPI10Q08202 246 aa8.93□□□□□ -0.98
SEC61YLR378C TRM8Q12009 286 aa8.93□□□□□ -0.98
SEC61YLR378C RGT2Q12300 763 aa8.93□□□□□ -0.98
SEC61YLR378C JLP1Q12358 412 aa8.93□□□□□ -0.98
SEC61YLR378C DST1P07273 309 aa8.92□□□□□ -0.98
SEC61YLR378C URA4P20051 364 aa8.92□□□□□ -0.98
SEC61YLR378C SGV1P23293 657 aaKnown RBP8.92□□□□□ -0.98
SEC61YLR378C FUN30P31380 1131 aa8.92□□□□□ -0.98
SEC61YLR378C DPH5P32469 300 aaPredicted RBP8.92□□□□□ -0.98
SEC61YLR378C AST1P35183 429 aa8.92□□□□□ -0.98
SEC61YLR378C MRPL17P36528 281 aa8.92□□□□□ -0.98
SEC61YLR378C PDX3P38075 228 aaKnown RBP8.92□□□□□ -0.98
SEC61YLR378C ROT2P38138 954 aa8.92□□□□□ -0.98
SEC61YLR378C TDP1P38319 544 aa8.92□□□□□ -0.98
SEC61YLR378C YEL073CP39974 107 aa8.92□□□□□ -0.98
SEC61YLR378C SEC26P41810 973 aaKnown RBP8.92□□□□□ -0.98
SEC61YLR378C SEC27P41811 889 aaKnown RBP8.92□□□□□ -0.98
SEC61YLR378C NOP9P47077 666 aaKnown RBP8.92□□□□□ -0.98
SEC61YLR378C YNL033WP53964 284 aa8.92□□□□□ -0.98
SEC61YLR378C YNL019CP53975 284 aa8.92□□□□□ -0.98
SEC61YLR378C ECM9Q02202 377 aa8.92□□□□□ -0.98
SEC61YLR378C MET31Q03081 177 aa8.92□□□□□ -0.98
SEC61YLR378C ULA1Q12059 462 aa8.92□□□□□ -0.98
SEC61YLR378C RPN5Q12250 445 aaKnown RBP8.92□□□□□ -0.98
SEC61YLR378C MHT1Q12525 324 aa8.92□□□□□ -0.98
SEC61YLR378C Q0182Q9ZZW1 134 aa8.92□□□□□ -0.98
SEC61YLR378C RAS2P01120 322 aaKnown RBP8.91□□□□□ -0.98
SEC61YLR378C ARG3P05150 338 aa8.91□□□□□ -0.98
SEC61YLR378C ATP4P05626 244 aa8.91□□□□□ -0.98
SEC61YLR378C BCY1P07278 416 aaKnown RBP8.91□□□□□ -0.98
SEC61YLR378C MRP13P12686 339 aa8.91□□□□□ -0.98
SEC61YLR378C CLN2P20438 545 aa8.91□□□□□ -0.98
SEC61YLR378C ATO2P32907 282 aa8.91□□□□□ -0.98
SEC61YLR378C MRP8P35719 219 aa8.91□□□□□ -0.98
SEC61YLR378C VPS21P36017 210 aaKnown RBP8.91□□□□□ -0.98
SEC61YLR378C INM1P38710 295 aa8.91□□□□□ -0.98
SEC61YLR378C PTR3P43606 678 aa8.91□□□□□ -0.98
SEC61YLR378C VMA10P48836 114 aaKnown RBP8.91□□□□□ -0.98
SEC61YLR378C KEL2P50090 882 aa8.91□□□□□ -0.98
SEC61YLR378C NBP35P52920 328 aa8.91□□□□□ -0.98
SEC61YLR378C MTO1P53070 669 aa8.91□□□□□ -0.98
SEC61YLR378C NPY1P53164 384 aa8.91□□□□□ -0.98
SEC61YLR378C CAF120P53836 1060 aa8.91□□□□□ -0.98
SEC61YLR378C YNL140CP53910 189 aa8.91□□□□□ -0.98
SEC61YLR378C NAN1Q02931 896 aaKnown RBP8.91□□□□□ -0.98
SEC61YLR378C YMR010WQ03687 405 aa8.91□□□□□ -0.98
SEC61YLR378C RAD33Q04231 177 aa8.91□□□□□ -0.98
SEC61YLR378C YHC1Q05900 231 aaKnown RBP8.91□□□□□ -0.98
SEC61YLR378C VPS68Q12016 184 aa8.91□□□□□ -0.98
SEC61YLR378C ATG29Q12092 213 aa8.91□□□□□ -0.98
SEC61YLR378C YPL245WQ12179 454 aaKnown RBP8.91□□□□□ -0.98
SEC61YLR378C YVC1Q12324 675 aa8.91□□□□□ -0.98
SEC61YLR378C INH1P01097 85 aa8.9□□□□□ -0.98
SEC61YLR378C FUM1P08417 488 aaKnown RBP8.9□□□□□ -0.98
SEC61YLR378C RPS4AP0CX35 261 aaKnown RBP8.9□□□□□ -0.98
SEC61YLR378C RPS4BP0CX36 261 aaKnown RBP8.9□□□□□ -0.98
SEC61YLR378C STE6P12866 1290 aa8.9□□□□□ -0.98
SEC61YLR378C YSR3P23501 404 aa8.9□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms