RNA–Protein interactions for RNA: YLL049W

LDB18, Transcript of Component of the dynactin complex, yeastyeast

Gene LDB18, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB18YLL049W INN1P53901 409 aa5.05□□□□□ -1.6
LDB18YLL049W AAT1Q01802 451 aa5.05□□□□□ -1.6
LDB18YLL049W OSH6Q02201 448 aa5.05□□□□□ -1.6
LDB18YLL049W YDR541CQ03049 344 aa5.05□□□□□ -1.6
LDB18YLL049W YDR209CQ03480 137 aa5.05□□□□□ -1.6
LDB18YLL049W VTA1Q06263 330 aa5.05□□□□□ -1.6
LDB18YLL049W PUF3Q07807 879 aaKnown RBP RIP-Chip data5.05□□□□□ -1.6not detected
LDB18YLL049W ATG9Q12142 997 aa5.05□□□□□ -1.6
LDB18YLL049W NOP14Q99207 810 aaKnown RBP5.05□□□□□ -1.6
LDB18YLL049W LAT1P12695 482 aaKnown RBP5.04□□□□□ -1.6
LDB18YLL049W PRP16P15938 1071 aaPredicted RBP5.04□□□□□ -1.6
LDB18YLL049W CHA1P25379 360 aaKnown RBP5.04□□□□□ -1.6
LDB18YLL049W MXR2P25566 168 aa5.04□□□□□ -1.6
LDB18YLL049W GID7P25569 745 aa5.04□□□□□ -1.6
LDB18YLL049W ARE1P25628 610 aa5.04□□□□□ -1.6
LDB18YLL049W ATP11P32453 318 aa5.04□□□□□ -1.6
LDB18YLL049W SRB5P32585 307 aa5.04□□□□□ -1.6
LDB18YLL049W SKT5P34226 696 aa5.04□□□□□ -1.6
LDB18YLL049W RPS27AP35997 82 aaKnown RBP5.04□□□□□ -1.6
LDB18YLL049W GLY1P37303 387 aaKnown RBP5.04□□□□□ -1.6
LDB18YLL049W MRPL16P38064 232 aa5.04□□□□□ -1.6
LDB18YLL049W MCM7P38132 845 aa5.04□□□□□ -1.6
LDB18YLL049W YSW1P38280 609 aa5.04□□□□□ -1.6
LDB18YLL049W RPS27BP38711 82 aa5.04□□□□□ -1.6
LDB18YLL049W YEL020CP39994 560 aa5.04□□□□□ -1.6
LDB18YLL049W BAP3P41815 604 aa5.04□□□□□ -1.6
LDB18YLL049W YGR021WP53212 290 aa5.04□□□□□ -1.6
LDB18YLL049W NOP15P53927 220 aaPredicted RBP5.04□□□□□ -1.6
LDB18YLL049W NUP116Q02630 1113 aa5.04□□□□□ -1.6
LDB18YLL049W RSC3Q06639 885 aa5.04□□□□□ -1.6
LDB18YLL049W ADY3Q07732 790 aa5.04□□□□□ -1.6
LDB18YLL049W YPR022CQ12139 1133 aa5.04□□□□□ -1.6
LDB18YLL049W YJU2P28320 278 aaPredicted RBP5.03□□□□□ -1.6
LDB18YLL049W LHS1P36016 881 aa5.03□□□□□ -1.6
LDB18YLL049W YPT52P36018 234 aaKnown RBP5.03□□□□□ -1.6
LDB18YLL049W YKL077WP36081 392 aa5.03□□□□□ -1.6
LDB18YLL049W PCH2P38126 564 aa5.03□□□□□ -1.6
LDB18YLL049W YBP1P38315 674 aa5.03□□□□□ -1.6
LDB18YLL049W VHC1P38329 1120 aa5.03□□□□□ -1.6
LDB18YLL049W SMC2P38989 1170 aaKnown RBP5.03□□□□□ -1.6
LDB18YLL049W GCV1P48015 400 aa5.03□□□□□ -1.6
LDB18YLL049W ERG13P54839 491 aaKnown RBP5.03□□□□□ -1.6
LDB18YLL049W TRS31Q03337 283 aa5.03□□□□□ -1.6
LDB18YLL049W ENT4Q07872 247 aa5.03□□□□□ -1.6
LDB18YLL049W YDR018CQ12185 396 aa5.03□□□□□ -1.6
LDB18YLL049W INO1P11986 533 aa5.02□□□□□ -1.61
LDB18YLL049W BUD14P27637 709 aa5.02□□□□□ -1.61
LDB18YLL049W TIP20P33891 701 aa5.02□□□□□ -1.61
LDB18YLL049W YBL055CP34220 418 aaPredicted RBP5.02□□□□□ -1.61
LDB18YLL049W THI80P35202 319 aa5.02□□□□□ -1.61
LDB18YLL049W BLI1P35727 113 aa5.02□□□□□ -1.61
LDB18YLL049W YBR139WP38109 508 aa5.02□□□□□ -1.61
LDB18YLL049W AMN1P38285 549 aaPredicted RBP5.02□□□□□ -1.61
LDB18YLL049W HIS2P38635 335 aa5.02□□□□□ -1.61
LDB18YLL049W YEN1P40028 759 aa5.02□□□□□ -1.61
LDB18YLL049W TAH11P47112 604 aa5.02□□□□□ -1.61
LDB18YLL049W SCW11P53189 542 aa5.02□□□□□ -1.61
LDB18YLL049W RPN14P53196 417 aa5.02□□□□□ -1.61
LDB18YLL049W YGR250CP53316 781 aaKnown RBP5.02□□□□□ -1.61
LDB18YLL049W MOT3P54785 490 aaKnown RBP5.02□□□□□ -1.61
LDB18YLL049W YLR287CQ05881 355 aa5.02□□□□□ -1.61
LDB18YLL049W YPS7Q06325 596 aa5.02□□□□□ -1.61
LDB18YLL049W NBA1Q08229 501 aaKnown RBP5.02□□□□□ -1.61
LDB18YLL049W YOR114WQ12219 294 aa5.02□□□□□ -1.61
LDB18YLL049W HTS1P07263 546 aaKnown RBP5.01□□□□□ -1.61
LDB18YLL049W YAR066WP0CX18 203 aa5.01□□□□□ -1.61
LDB18YLL049W YHR214WP0CX19 203 aa5.01□□□□□ -1.61
LDB18YLL049W HRR25P29295 494 aaKnown RBP5.01□□□□□ -1.61
LDB18YLL049W OM14P38325 134 aa5.01□□□□□ -1.61
LDB18YLL049W RRT2P38332 387 aa5.01□□□□□ -1.61
LDB18YLL049W YHR127WP38833 243 aaKnown RBP5.01□□□□□ -1.61
LDB18YLL049W MEF2P39677 819 aa5.01□□□□□ -1.61
LDB18YLL049W SPC72P39723 622 aa5.01□□□□□ -1.61
LDB18YLL049W VRG4P40107 337 aa5.01□□□□□ -1.61
LDB18YLL049W UTP18P40362 594 aaPredicted RBP5.01□□□□□ -1.61
LDB18YLL049W RTA1P53047 317 aa5.01□□□□□ -1.61
LDB18YLL049W MPS2P53159 387 aa5.01□□□□□ -1.61
LDB18YLL049W UBP2Q01476 1272 aa5.01□□□□□ -1.61
LDB18YLL049W NTG2Q08214 380 aa5.01□□□□□ -1.61
LDB18YLL049W SLD7Q08457 257 aa5.01□□□□□ -1.61
LDB18YLL049W TY1A-BLQ12266 440 aa5.01□□□□□ -1.61
LDB18YLL049W LDB17Q12342 491 aa5.01□□□□□ -1.61
LDB18YLL049W SLH1P53327 1967 aaKnown RBP5.01□□□□□ -1.61
LDB18YLL049W BLM10P43583 2143 aa5□□□□□ -1.61
LDB18YLL049W KIN2P13186 1147 aaKnown RBP5□□□□□ -1.61
LDB18YLL049W MET8P15807 274 aa5□□□□□ -1.61
LDB18YLL049W SPO12P17123 173 aa5□□□□□ -1.61
LDB18YLL049W SYP1P25623 870 aaKnown RBP5□□□□□ -1.61
LDB18YLL049W YCR099CP25657 155 aa5□□□□□ -1.61
LDB18YLL049W NDI1P32340 513 aa5□□□□□ -1.61
LDB18YLL049W MAK5P38112 773 aaPredicted RBP5□□□□□ -1.61
LDB18YLL049W MRP21P38175 177 aa5□□□□□ -1.61
LDB18YLL049W SET5P38890 526 aaKnown RBP5□□□□□ -1.61
LDB18YLL049W YMR124WP39523 943 aaKnown RBP5□□□□□ -1.61
LDB18YLL049W PEX8P53248 589 aa5□□□□□ -1.61
LDB18YLL049W JJJ1P53863 590 aa5□□□□□ -1.61
LDB18YLL049W ATG4P53867 494 aa5□□□□□ -1.61
LDB18YLL049W MPS1P54199 764 aa5□□□□□ -1.61
LDB18YLL049W PET117Q02771 107 aa5□□□□□ -1.61
LDB18YLL049W TFB2Q02939 513 aa5□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 265.1 ms