RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C MPS2P53159 387 aa2.33□□□□□ -2.04
VPS13YLL040C MPS1P54199 764 aa2.33□□□□□ -2.04
VPS13YLL040C SDH1Q00711 640 aa2.33□□□□□ -2.04
VPS13YLL040C CEG1Q01159 459 aaPredicted RBP2.33□□□□□ -2.04
VPS13YLL040C ISU1Q03020 165 aa2.33□□□□□ -2.04
VPS13YLL040C CST9Q06032 482 aa2.33□□□□□ -2.04
VPS13YLL040C PST2Q12335 198 aaKnown RBP2.33□□□□□ -2.04
VPS13YLL040C RIB7P33312 244 aa2.33□□□□□ -2.04
VPS13YLL040C SPO23P33757 523 aa2.33□□□□□ -2.04
VPS13YLL040C MSC7P38694 644 aa2.33□□□□□ -2.04
VPS13YLL040C YEL020CP39994 560 aa2.33□□□□□ -2.04
VPS13YLL040C PAC11P40960 533 aa2.33□□□□□ -2.04
VPS13YLL040C IME4P41833 600 aa2.33□□□□□ -2.04
VPS13YLL040C RTS3P53289 263 aa2.33□□□□□ -2.04
VPS13YLL040C SOK2P53438 785 aaPredicted RBP2.33□□□□□ -2.04
VPS13YLL040C MEH1Q02205 184 aa2.33□□□□□ -2.04
VPS13YLL040C SPP1Q03012 353 aa2.33□□□□□ -2.04
VPS13YLL040C SGT1Q08446 395 aa2.33□□□□□ -2.04
VPS13YLL040C ATG29Q12092 213 aa2.33□□□□□ -2.04
VPS13YLL040C RTR2Q12378 196 aa2.33□□□□□ -2.04
VPS13YLL040C MHF1Q3E835 90 aa2.33□□□□□ -2.04
VPS13YLL040C NHP6BP11633 99 aaKnown RBP2.33□□□□□ -2.04
VPS13YLL040C DPM1P14020 267 aaKnown RBP2.33□□□□□ -2.04
VPS13YLL040C CRM1P30822 1084 aaKnown RBP2.33□□□□□ -2.04
VPS13YLL040C KES1P35844 434 aaKnown RBP2.33□□□□□ -2.04
VPS13YLL040C MET30P39014 640 aa2.33□□□□□ -2.04
VPS13YLL040C YTA6P40328 754 aa2.33□□□□□ -2.04
VPS13YLL040C PSF2P40359 213 aa2.33□□□□□ -2.04
VPS13YLL040C MAL11P53048 616 aa2.33□□□□□ -2.04
VPS13YLL040C PEX12Q04370 399 aa2.33□□□□□ -2.04
VPS13YLL040C ATG26Q06321 1198 aa2.33□□□□□ -2.04
VPS13YLL040C YPR127WQ06494 345 aa2.33□□□□□ -2.04
VPS13YLL040C LDB18Q07887 179 aa2.33□□□□□ -2.04
VPS13YLL040C RTC5Q12108 567 aaKnown RBP2.33□□□□□ -2.04
VPS13YLL040C YCL012CQ8J0M4 134 aa2.33□□□□□ -2.04
VPS13YLL040C PHO5P00635 467 aa2.33□□□□□ -2.04
VPS13YLL040C HVG1P0CE11 249 aa2.33□□□□□ -2.04
VPS13YLL040C PRE7P23724 241 aaKnown RBP2.33□□□□□ -2.04
VPS13YLL040C YCR099CP25657 155 aa2.33□□□□□ -2.04
VPS13YLL040C HIS7P33734 552 aaKnown RBP2.33□□□□□ -2.04
VPS13YLL040C TIP20P33891 701 aa2.33□□□□□ -2.04
VPS13YLL040C PLB1P39105 664 aa2.33□□□□□ -2.04
VPS13YLL040C PEA2P40091 420 aa2.33□□□□□ -2.04
VPS13YLL040C RRT5P43607 289 aa2.33□□□□□ -2.04
VPS13YLL040C RSM26P47141 266 aa2.33□□□□□ -2.04
VPS13YLL040C PMT7Q06644 662 aa2.33□□□□□ -2.04
VPS13YLL040C CTF3Q12748 733 aa2.33□□□□□ -2.04
VPS13YLL040C PRP2P20095 876 aaPredicted RBP2.33□□□□□ -2.04
VPS13YLL040C CTR86P25355 563 aa2.33□□□□□ -2.04
VPS13YLL040C MRPL37P36532 105 aa2.33□□□□□ -2.04
VPS13YLL040C YRO2P38079 344 aa2.33□□□□□ -2.04
VPS13YLL040C IFA38P38286 347 aa2.33□□□□□ -2.04
VPS13YLL040C AAD10P47182 288 aa2.33□□□□□ -2.04
VPS13YLL040C BOL2P53082 120 aa2.33□□□□□ -2.04
VPS13YLL040C SEC10Q06245 871 aa2.33□□□□□ -2.04
VPS13YLL040C BUD7Q08754 746 aa2.33□□□□□ -2.04
VPS13YLL040C RAD7P06779 565 aa2.32□□□□□ -2.04
VPS13YLL040C SFA1P32771 386 aa2.32□□□□□ -2.04
VPS13YLL040C SPC34P36131 295 aa2.32□□□□□ -2.04
VPS13YLL040C QNS1P38795 714 aaKnown RBP2.32□□□□□ -2.04
VPS13YLL040C PCL6P40038 420 aa2.32□□□□□ -2.04
VPS13YLL040C YRB1P41920 201 aaKnown RBP2.32□□□□□ -2.04
VPS13YLL040C DCP2P53550 970 aaKnown RBP2.32□□□□□ -2.04
VPS13YLL040C NOG2P53742 486 aaKnown RBP2.32□□□□□ -2.04
VPS13YLL040C YMR155WQ03795 547 aa2.32□□□□□ -2.04
VPS13YLL040C DUS4Q06063 367 aa2.32□□□□□ -2.04
VPS13YLL040C MCM21Q06675 368 aa2.32□□□□□ -2.04
VPS13YLL040C BAG7Q12128 409 aa2.32□□□□□ -2.04
VPS13YLL040C NCR1Q12200 1170 aa2.32□□□□□ -2.04
VPS13YLL040C HOP1P20050 605 aa2.32□□□□□ -2.04
VPS13YLL040C CBT1P36038 271 aaPredicted RBP2.32□□□□□ -2.04
VPS13YLL040C EAF5P39995 279 aa2.32□□□□□ -2.04
VPS13YLL040C IBD2P53892 351 aa2.32□□□□□ -2.04
VPS13YLL040C ENT4Q07872 247 aa2.32□□□□□ -2.04
VPS13YLL040C YOR238WQ08634 303 aa2.32□□□□□ -2.04
VPS13YLL040C AHC1Q12433 566 aa2.32□□□□□ -2.04
VPS13YLL040C HTA1P04911 132 aaKnown RBP2.32□□□□□ -2.04
VPS13YLL040C ACO1P19414 778 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
VPS13YLL040C RAM1P22007 431 aa2.32□□□□□ -2.04
VPS13YLL040C ARN2P38724 620 aa2.32□□□□□ -2.04
VPS13YLL040C REF2P42073 533 aaPredicted RBP2.32□□□□□ -2.04
VPS13YLL040C COS4P43542 379 aa2.32□□□□□ -2.04
VPS13YLL040C SNG1P46950 547 aa2.32□□□□□ -2.04
VPS13YLL040C COG1P53079 417 aa2.32□□□□□ -2.04
VPS13YLL040C MSC2Q03455 724 aa2.32□□□□□ -2.04
VPS13YLL040C KRE28Q04431 385 aa2.32□□□□□ -2.04
VPS13YLL040C YMR321CQ04898 105 aa2.32□□□□□ -2.04
VPS13YLL040C ACM1Q08981 209 aa2.32□□□□□ -2.04
VPS13YLL040C NFI1Q12216 726 aa2.32□□□□□ -2.04
VPS13YLL040C TIF6Q12522 245 aaKnown RBP2.32□□□□□ -2.04
VPS13YLL040C THP2O13539 261 aaKnown RBP2.32□□□□□ -2.04
VPS13YLL040C NPP1P25353 742 aa2.32□□□□□ -2.04
VPS13YLL040C FUB1P25659 250 aa2.32□□□□□ -2.04
VPS13YLL040C PTP2P29461 750 aa2.32□□□□□ -2.04
VPS13YLL040C PPQ1P32945 549 aa2.32□□□□□ -2.04
VPS13YLL040C PXA2P34230 853 aa2.32□□□□□ -2.04
VPS13YLL040C EDC3P39998 551 aaKnown RBP2.32□□□□□ -2.04
VPS13YLL040C HPM1P40481 377 aa2.32□□□□□ -2.04
VPS13YLL040C TBF1Q02457 562 aa2.32□□□□□ -2.04
VPS13YLL040C RSC9Q03124 581 aa2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms