RNA–Protein interactions for RNA: YKL197C

PEX1, Transcript of AAA-peroxin, yeast

Gene PEX1, Length 3,132 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX1	YKL197C	FAR10	Q06001	478 aa		3.39	□□□□□ -1.87
PEX1	YKL197C	TFC6	Q06339	672 aa		3.39	□□□□□ -1.87
PEX1	YKL197C	CTI6	Q08923	506 aa		3.39	□□□□□ -1.87
PEX1	YKL197C	YDR262W	Q12331	272 aa		3.39	□□□□□ -1.87
PEX1	YKL197C	PDH1	Q12428	516 aa	Known RBP	3.39	□□□□□ -1.87
PEX1	YKL197C	KIN28	P06242	306 aa		3.39	□□□□□ -1.87
PEX1	YKL197C	PHO4	P07270	312 aa	Known RBP	3.39	□□□□□ -1.87
PEX1	YKL197C	MET2	P08465	486 aa		3.39	□□□□□ -1.87
PEX1	YKL197C	GLN4	P13188	809 aa	Known RBP	3.39	□□□□□ -1.87
PEX1	YKL197C	POL30	P15873	258 aa	Known RBP	3.39	□□□□□ -1.87
PEX1	YKL197C	CNA1	P23287	553 aa		3.39	□□□□□ -1.87
PEX1	YKL197C	BUD5	P25300	642 aa	Predicted RBP	3.39	□□□□□ -1.87
PEX1	YKL197C	STE50	P25344	346 aa		3.39	□□□□□ -1.87
PEX1	YKL197C	PHO91	P27514	894 aa		3.39	□□□□□ -1.87
PEX1	YKL197C	DAL3	P32459	195 aa		3.39	□□□□□ -1.87
PEX1	YKL197C	PET127	P32606	800 aa		3.39	□□□□□ -1.87
PEX1	YKL197C	NIC96	P34077	839 aa		3.39	□□□□□ -1.87
PEX1	YKL197C	RPF2	P36160	344 aa	Known RBP	3.39	□□□□□ -1.87
PEX1	YKL197C	APE3	P37302	537 aa	Known RBP	3.39	□□□□□ -1.87
PEX1	YKL197C	PCM1	P38628	557 aa	Known RBP	3.39	□□□□□ -1.87
PEX1	YKL197C	YHL017W	P38745	532 aa		3.39	□□□□□ -1.87
PEX1	YKL197C	QNS1	P38795	714 aa	Known RBP	3.39	□□□□□ -1.87
PEX1	YKL197C	DPH1	P40487	425 aa	Known RBP	3.39	□□□□□ -1.87
PEX1	YKL197C	OTU1	P43558	301 aa		3.39	□□□□□ -1.87
PEX1	YKL197C	YJL016W	P47072	561 aa		3.39	□□□□□ -1.87
PEX1	YKL197C	PAC10	P48363	199 aa		3.39	□□□□□ -1.87
PEX1	YKL197C	BPL1	P48445	690 aa	Predicted RBP	3.39	□□□□□ -1.87
PEX1	YKL197C	BUD9	P53226	547 aa		3.39	□□□□□ -1.87
PEX1	YKL197C	SNP1	Q00916	300 aa	Predicted RBP	3.39	□□□□□ -1.87
PEX1	YKL197C	UME1	Q03010	460 aa		3.39	□□□□□ -1.87
PEX1	YKL197C	NHP10	Q03435	203 aa		3.39	□□□□□ -1.87
PEX1	YKL197C	NHX1	Q04121	633 aa		3.39	□□□□□ -1.87
PEX1	YKL197C	PLM2	Q04383	521 aa		3.39	□□□□□ -1.87
PEX1	YKL197C	PAL1	Q05518	499 aa	Known RBP	3.39	□□□□□ -1.87
PEX1	YKL197C	HRQ1	Q05549	1077 aa		3.39	□□□□□ -1.87
PEX1	YKL197C	CRR1	Q05790	422 aa		3.39	□□□□□ -1.87
PEX1	YKL197C	YEH1	Q07804	573 aa		3.39	□□□□□ -1.87
PEX1	YKL197C	CMR1	Q12510	522 aa	Known RBP	3.39	□□□□□ -1.87
PEX1	YKL197C	WIP1	Q2V2P8	89 aa		3.39	□□□□□ -1.87
PEX1	YKL197C	PPH22	P23595	377 aa		3.38	□□□□□ -1.87
PEX1	YKL197C	RHB1	P25378	209 aa		3.38	□□□□□ -1.87
PEX1	YKL197C	CTF13	P35203	478 aa		3.38	□□□□□ -1.87
PEX1	YKL197C	ECM13	P38195	257 aa		3.38	□□□□□ -1.87
PEX1	YKL197C	YBR062C	P38239	180 aa		3.38	□□□□□ -1.87
PEX1	YKL197C	YER085C	P40058	173 aa		3.38	□□□□□ -1.87
PEX1	YKL197C	VHR1	P40522	640 aa		3.38	□□□□□ -1.87
PEX1	YKL197C	SAD1	P43589	448 aa		3.38	□□□□□ -1.87
PEX1	YKL197C	YFH7	P43591	353 aa		3.38	□□□□□ -1.87
PEX1	YKL197C	NMD5	P46970	1048 aa		3.38	□□□□□ -1.87
PEX1	YKL197C	CTH1	P47976	325 aa		3.38	□□□□□ -1.87
PEX1	YKL197C	IMA1	P53051	589 aa		3.38	□□□□□ -1.87
PEX1	YKL197C	DUO1	P53168	247 aa	Known RBP	3.38	□□□□□ -1.87
PEX1	YKL197C	PBP1	P53297	722 aa	Known RBP	3.38	□□□□□ -1.87
PEX1	YKL197C	DBP6	P53734	629 aa	Known RBP	3.38	□□□□□ -1.87
PEX1	YKL197C	NSG2	P53898	299 aa		3.38	□□□□□ -1.87
PEX1	YKL197C	OAZ1	Q02803	292 aa		3.38	□□□□□ -1.87
PEX1	YKL197C	SKY1	Q03656	742 aa		3.38	□□□□□ -1.87
PEX1	YKL197C	TMA16	Q08687	178 aa		3.38	□□□□□ -1.87
PEX1	YKL197C	MLH3	Q12083	715 aa		3.38	□□□□□ -1.87
PEX1	YKL197C	HUA2	Q12134	243 aa		3.38	□□□□□ -1.87
PEX1	YKL197C	SIR4	P11978	1358 aa		3.38	□□□□□ -1.87
PEX1	YKL197C	ARO3	P14843	370 aa	Known RBP	3.38	□□□□□ -1.87
PEX1	YKL197C	RNR1	P21524	888 aa	Known RBP	3.38	□□□□□ -1.87
PEX1	YKL197C	TFC1	P32367	649 aa		3.38	□□□□□ -1.87
PEX1	YKL197C	TCA17	P32613	152 aa		3.38	□□□□□ -1.87
PEX1	YKL197C	LHP1	P33399	275 aa	Known RBP	3.38	□□□□□ -1.87
PEX1	YKL197C	RCN1	P36054	211 aa		3.38	□□□□□ -1.87
PEX1	YKL197C	PRS2	P38620	318 aa	Known RBP	3.38	□□□□□ -1.87
PEX1	YKL197C	NPR2	P39923	615 aa		3.38	□□□□□ -1.87
PEX1	YKL197C	HIS6	P40545	261 aa		3.38	□□□□□ -1.87
PEX1	YKL197C	DOT5	P40553	215 aa		3.38	□□□□□ -1.87
PEX1	YKL197C	YJR124C	P47159	448 aa		3.38	□□□□□ -1.87
PEX1	YKL197C	FAA4	P47912	694 aa	Known RBP	3.38	□□□□□ -1.87
PEX1	YKL197C	ASK10	P48361	1146 aa		3.38	□□□□□ -1.87
PEX1	YKL197C	SHY1	P53266	389 aa		3.38	□□□□□ -1.87
PEX1	YKL197C	HDA1	P53973	706 aa		3.38	□□□□□ -1.87
PEX1	YKL197C	AIM32	Q04689	311 aa		3.38	□□□□□ -1.87
PEX1	YKL197C	FMP42	Q04991	504 aa		3.38	□□□□□ -1.87
PEX1	YKL197C	LUC7	Q07508	261 aa	Predicted RBP	3.38	□□□□□ -1.87
PEX1	YKL197C	YPL216W	Q08964	1102 aa		3.38	□□□□□ -1.87
PEX1	YKL197C	TMA46	Q12000	345 aa	Known RBP	3.38	□□□□□ -1.87
PEX1	YKL197C	AKR2	Q12013	749 aa		3.38	□□□□□ -1.87
PEX1	YKL197C	CAN1	P04817	590 aa		3.37	□□□□□ -1.87
PEX1	YKL197C	MET17	P06106	444 aa		3.37	□□□□□ -1.87
PEX1	YKL197C	DST1	P07273	309 aa		3.37	□□□□□ -1.87
PEX1	YKL197C	SSA3	P09435	649 aa	Known RBP	3.37	□□□□□ -1.87
PEX1	YKL197C	PYC1	P11154	1178 aa	Known RBP	3.37	□□□□□ -1.87
PEX1	YKL197C	FBA1	P14540	359 aa	Known RBP	3.37	□□□□□ -1.87
PEX1	YKL197C	CBS2	P14905	389 aa		3.37	□□□□□ -1.87
PEX1	YKL197C	DBF4	P32325	704 aa		3.37	□□□□□ -1.87
PEX1	YKL197C	TSA1	P34760	196 aa	Known RBP	3.37	□□□□□ -1.87
PEX1	YKL197C	CDS1	P38221	457 aa		3.37	□□□□□ -1.87
PEX1	YKL197C	YBR225W	P38321	900 aa		3.37	□□□□□ -1.87
PEX1	YKL197C	PCF11	P39081	626 aa	Predicted RBP	3.37	□□□□□ -1.87
PEX1	YKL197C	YER121W	P40076	114 aa		3.37	□□□□□ -1.87
PEX1	YKL197C	TDA10	P42938	290 aa		3.37	□□□□□ -1.87
PEX1	YKL197C	PMT3	P47190	753 aa		3.37	□□□□□ -1.87
PEX1	YKL197C	RPS7B	P48164	190 aa	Known RBP	3.37	□□□□□ -1.87
PEX1	YKL197C	PRP24	P49960	444 aa	Known RBP	3.37	□□□□□ -1.87
PEX1	YKL197C	MRK1	P50873	501 aa		3.37	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms