RNA–Protein interactions for RNA: YKL028W

TFA1, Transcript of TFIIE large subunit, yeastyeast

Gene TFA1, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFA1YKL028W PRP2P20095 876 aaPredicted RBP4.34□□□□□ -1.71
TFA1YKL028W IMG1P25626 169 aa4.34□□□□□ -1.71
TFA1YKL028W CNE1P27825 502 aa4.34□□□□□ -1.71
TFA1YKL028W MVD1P32377 396 aaKnown RBP4.34□□□□□ -1.71
TFA1YKL028W DPH5P32469 300 aaPredicted RBP4.34□□□□□ -1.71
TFA1YKL028W RPT5P33297 434 aaKnown RBP4.34□□□□□ -1.71
TFA1YKL028W SNU114P36048 1008 aaKnown RBP4.34□□□□□ -1.71
TFA1YKL028W CTP1P38152 299 aa4.34□□□□□ -1.71
TFA1YKL028W MSG5P38590 489 aa4.34□□□□□ -1.71
TFA1YKL028W TOM71P38825 639 aaKnown RBP4.34□□□□□ -1.71
TFA1YKL028W VHS2P40463 436 aa4.34□□□□□ -1.71
TFA1YKL028W IAH1P41734 238 aa4.34□□□□□ -1.71
TFA1YKL028W FKH2P41813 862 aa4.34□□□□□ -1.71
TFA1YKL028W UBX6P47049 396 aa4.34□□□□□ -1.71
TFA1YKL028W RAD17P48581 401 aa4.34□□□□□ -1.71
TFA1YKL028W VPS73P53142 486 aaKnown RBP4.34□□□□□ -1.71
TFA1YKL028W YMR160WQ03823 816 aa4.34□□□□□ -1.71
TFA1YKL028W NDL1Q06568 189 aa4.34□□□□□ -1.71
TFA1YKL028W YPL216WQ08964 1102 aa4.34□□□□□ -1.71
TFA1YKL028W ATG9Q12142 997 aa4.34□□□□□ -1.71
TFA1YKL028W INP53Q12271 1107 aa4.34□□□□□ -1.71
TFA1YKL028W ADF1Q2V2Q1 113 aa4.34□□□□□ -1.71
TFA1YKL028W MTR10Q99189 972 aa4.34□□□□□ -1.71
TFA1YKL028W AI5_ALPHAQ9ZZX1 630 aa4.34□□□□□ -1.71
TFA1YKL028W CAR1P00812 333 aaKnown RBP4.33□□□□□ -1.72
TFA1YKL028W RPL31BP0C2H9 113 aaKnown RBP4.33□□□□□ -1.72
TFA1YKL028W SCH9P11792 824 aaKnown RBP4.33□□□□□ -1.72
TFA1YKL028W PCT1P13259 424 aa4.33□□□□□ -1.72
TFA1YKL028W ELO2P25358 347 aa4.33□□□□□ -1.72
TFA1YKL028W SIP1P32578 815 aa4.33□□□□□ -1.72
TFA1YKL028W TPO5P36029 618 aa4.33□□□□□ -1.72
TFA1YKL028W MMS4P38257 691 aa4.33□□□□□ -1.72
TFA1YKL028W PEX32P38292 413 aa4.33□□□□□ -1.72
TFA1YKL028W YMR124WP39523 943 aaKnown RBP4.33□□□□□ -1.72
TFA1YKL028W INA22P40576 216 aa4.33□□□□□ -1.72
TFA1YKL028W GCN20P43535 752 aaKnown RBP4.33□□□□□ -1.72
TFA1YKL028W NMD5P46970 1048 aa4.33□□□□□ -1.72
TFA1YKL028W NPA3P47122 385 aa4.33□□□□□ -1.72
TFA1YKL028W AMA1P50082 593 aa4.33□□□□□ -1.72
TFA1YKL028W ADE16P54113 591 aaKnown RBP4.33□□□□□ -1.72
TFA1YKL028W ERG5P54781 538 aa4.33□□□□□ -1.72
TFA1YKL028W SEG1Q04279 960 aa4.33□□□□□ -1.72
TFA1YKL028W YDR109CQ04585 715 aa4.33□□□□□ -1.72
TFA1YKL028W YLR297WQ05899 129 aa4.33□□□□□ -1.72
TFA1YKL028W RTT109Q07794 436 aa4.33□□□□□ -1.72
TFA1YKL028W SLK19Q08581 821 aaKnown RBP4.33□□□□□ -1.72
TFA1YKL028W CLP1Q08685 445 aaPredicted RBP4.33□□□□□ -1.72
TFA1YKL028W VAM3Q12241 283 aa4.33□□□□□ -1.72
TFA1YKL028W STE2D6VTK4 431 aa4.32□□□□□ -1.72
TFA1YKL028W PDE2P06776 526 aa4.32□□□□□ -1.72
TFA1YKL028W SPS4P09937 338 aa4.32□□□□□ -1.72
TFA1YKL028W SAM1P10659 382 aaKnown RBP4.32□□□□□ -1.72
TFA1YKL028W UNG1P12887 359 aa4.32□□□□□ -1.72
TFA1YKL028W RPB4P20433 221 aaPredicted RBP4.32□□□□□ -1.72
TFA1YKL028W SPS22P25380 463 aa4.32□□□□□ -1.72
TFA1YKL028W RAD14P28519 371 aa4.32□□□□□ -1.72
TFA1YKL028W COT1P32798 439 aa4.32□□□□□ -1.72
TFA1YKL028W SOF1P33750 489 aaKnown RBP4.32□□□□□ -1.72
TFA1YKL028W SKI2P35207 1287 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
TFA1YKL028W PHO11P35842 467 aa4.32□□□□□ -1.72
TFA1YKL028W ELF1P36053 145 aa4.32□□□□□ -1.72
TFA1YKL028W RPF2P36160 344 aaKnown RBP4.32□□□□□ -1.72
TFA1YKL028W ARA1P38115 344 aa4.32□□□□□ -1.72
TFA1YKL028W KSP1P38691 1029 aaKnown RBP4.32□□□□□ -1.72
TFA1YKL028W PHO12P38693 467 aa4.32□□□□□ -1.72
TFA1YKL028W IMD2P38697 523 aaKnown RBP4.32□□□□□ -1.72
TFA1YKL028W BZZ1P38822 633 aa4.32□□□□□ -1.72
TFA1YKL028W PEX18P38855 283 aa4.32□□□□□ -1.72
TFA1YKL028W HRB1P38922 454 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
TFA1YKL028W PLB1P39105 664 aa4.32□□□□□ -1.72
TFA1YKL028W ELO1P39540 310 aa4.32□□□□□ -1.72
TFA1YKL028W ECM10P39987 644 aa4.32□□□□□ -1.72
TFA1YKL028W PHM8P40025 321 aa4.32□□□□□ -1.72
TFA1YKL028W MPS2P53159 387 aa4.32□□□□□ -1.72
TFA1YKL028W MPP6P53725 186 aaPredicted RBP4.32□□□□□ -1.72
TFA1YKL028W RPS15Q01855 142 aaKnown RBP4.32□□□□□ -1.72
TFA1YKL028W YDL242WQ07746 117 aa4.32□□□□□ -1.72
TFA1YKL028W AMD2P22580 549 aa4.31□□□□□ -1.72
TFA1YKL028W KAR4P25583 335 aa4.31□□□□□ -1.72
TFA1YKL028W LAC1P28496 418 aa4.31□□□□□ -1.72
TFA1YKL028W HIR2P32480 875 aa4.31□□□□□ -1.72
TFA1YKL028W DOA4P32571 926 aa4.31□□□□□ -1.72
TFA1YKL028W LHS1P36016 881 aa4.31□□□□□ -1.72
TFA1YKL028W NUP133P36161 1157 aa4.31□□□□□ -1.72
TFA1YKL028W PXL1P36166 706 aa4.31□□□□□ -1.72
TFA1YKL028W MRPL37P36532 105 aa4.31□□□□□ -1.72
TFA1YKL028W CIN1P40987 1014 aa4.31□□□□□ -1.72
TFA1YKL028W GCD14P46959 383 aaPredicted RBP4.31□□□□□ -1.72
TFA1YKL028W YGL242CP53066 181 aa4.31□□□□□ -1.72
TFA1YKL028W YIP5P53108 310 aa4.31□□□□□ -1.72
TFA1YKL028W PNC1P53184 216 aaKnown RBP4.31□□□□□ -1.72
TFA1YKL028W YNL092WP53934 400 aa4.31□□□□□ -1.72
TFA1YKL028W MFM1Q02783 413 aa4.31□□□□□ -1.72
TFA1YKL028W INP2Q03824 705 aa4.31□□□□□ -1.72
TFA1YKL028W ATC1Q04005 294 aa4.31□□□□□ -1.72
TFA1YKL028W SMA2Q04658 369 aa4.31□□□□□ -1.72
TFA1YKL028W ADE13Q05911 482 aaKnown RBP4.31□□□□□ -1.72
TFA1YKL028W YSH1Q06224 779 aaPredicted RBP4.31□□□□□ -1.72
TFA1YKL028W ETT1Q08421 412 aaKnown RBP4.31□□□□□ -1.72
TFA1YKL028W PLP2Q12017 286 aa4.31□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 80.1 ms